Gene annotation
Transcriptome id Sobic.004G005100.1,Sobic.004G005100.2
Synonym Sb04g000645
Functional annotation peptidase family C78 domain containing protein, expressed
UniProt C5XRK5
Pfam PF07910
Panther DB PTHR24375
NCBI CDD KOG4696; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G24680 : Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
RAP-DB (Rice) LOC_Os02g01710.1,LOC_Os02g01710.3 : peptidase family C78 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a035081 , Zm00025a018652
Brachypodium KQJ92825 , KQJ92824 , KQJ92823
Barley HORVU6Hr1G004180.11 , HORVU6Hr1G004180.10 , HORVU6Hr1G004180.13 , HORVU6Hr1G004180.12 , HORVU6Hr1G004180.15 , HORVU6Hr1G004180.14 , HORVU6Hr1G004180.17 , HORVU6Hr1G004180.16 , HORVU6Hr1G004180.19 , HORVU6Hr1G004180.18 , HORVU0Hr1G014940.2 , HORVU0Hr1G014940.1 , HORVU6Hr1G004180.24 , HORVU6Hr1G004180.25 , HORVU6Hr1G004180.26 , HORVU6Hr1G004180.20 , HORVU6Hr1G004180.21 , HORVU6Hr1G004180.22 , HORVU6Hr1G004180.23 , HORVU6Hr1G004180.5 , HORVU6Hr1G004180.4 , HORVU6Hr1G004180.7 , HORVU6Hr1G004180.6 , HORVU6Hr1G004180.1 , HORVU6Hr1G004180.3 , HORVU6Hr1G004180.2 , HORVU6Hr1G004180.9 , HORVU6Hr1G004180.8
Wheat TraesCS6B02G032700 , TraesCS6D02G027400 , TraesCS6A02G024000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G312100 guanine nucleotide exchange family protein, putative, expressed -
2 Sobic.010G080700 DNA-directed RNA polymerase subunit, putative, expressed K03021: RPC2, DNA-directed RNA polymerase III subunit RPC2
3 Sobic.001G291000 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
4 Sobic.006G040500 phospholipid-transporting ATPase 2, putative, expressed K01530: phospholipid-translocating ATPase
5 Sobic.008G088872 - -
6 Sobic.010G148932 - -
7 Sobic.004G135400 expressed protein -
8 Sobic.010G034000 zinc carboxypeptidase family protein, putative, expressed K07752: carboxypeptidase D
9 Sobic.004G248600 expressed protein K15166: mediator of RNA polymerase II transcription subunit 23
10 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
11 Sobic.009G131300 cation-transporting ATPase, putative, expressed K14950: ATP13A1, manganese-transporting P-type ATPase
12 Sobic.004G319900 expressed protein K05310: PIGG, ethanolamine phosphate transferase 2 subunit G
13 Sobic.001G105700 GTPase of unknown function domain containing protein, putative, expressed -
14 Sobic.010G279800 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
15 Sobic.008G085300 hhH-GPD superfamily base excision DNA repair protein, expressed -
16 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
17 Sobic.003G375200 mitotic checkpoint family protein, putative, expressed -
18 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
19 Sobic.004G277200 GPI transamidase subunit PIG-U domain containing protein, expressed K05293: GPI-anchor transamidase subunit U
20 Sobic.007G077900 zinc finger domain, LSD1 subclass family protein, expressed -


Gene co-expression network
sample Sobic004G005100 Sobic004G005100 Sobic003G312100 Sobic003G312100 Sobic004G005100--Sobic003G312100 Sobic010G080700 Sobic010G080700 Sobic004G005100--Sobic010G080700 Sobic001G291000 Sobic001G291000 Sobic004G005100--Sobic001G291000 Sobic006G040500 Sobic006G040500 Sobic004G005100--Sobic006G040500 Sobic008G088872 Sobic008G088872 Sobic004G005100--Sobic008G088872 Sobic010G148932 Sobic010G148932 Sobic004G005100--Sobic010G148932 Sobic004G135400 Sobic004G135400 Sobic004G005100--Sobic004G135400 Sobic010G034000 Sobic010G034000 Sobic004G005100--Sobic010G034000 Sobic004G248600 Sobic004G248600 Sobic004G005100--Sobic004G248600 Sobic003G312100--Sobic010G148932 Sobic003G233400 Sobic003G233400 Sobic003G312100--Sobic003G233400 Sobic001G137000 Sobic001G137000 Sobic003G312100--Sobic001G137000 Sobic007G019300 Sobic007G019300 Sobic003G312100--Sobic007G019300 Sobic003G072200 Sobic003G072200 Sobic003G312100--Sobic003G072200 Sobic002G397500 Sobic002G397500 Sobic003G312100--Sobic002G397500 Sobic001G004400 Sobic001G004400 Sobic003G312100--Sobic001G004400 Sobic003G312100--Sobic004G248600 Sobic002G396500 Sobic002G396500 Sobic003G312100--Sobic002G396500 Sobic003G375200 Sobic003G375200 Sobic010G080700--Sobic003G375200 Sobic003G221400 Sobic003G221400 Sobic010G080700--Sobic003G221400 Sobic005G162500 Sobic005G162500 Sobic010G080700--Sobic005G162500 Sobic002G179400 Sobic002G179400 Sobic010G080700--Sobic002G179400 Sobic010G059500 Sobic010G059500 Sobic010G080700--Sobic010G059500 Sobic001G089600 Sobic001G089600 Sobic010G080700--Sobic001G089600 Sobic008G124800 Sobic008G124800 Sobic010G080700--Sobic008G124800 Sobic004G322400 Sobic004G322400 Sobic010G080700--Sobic004G322400 Sobic004G131300 Sobic004G131300 Sobic010G080700--Sobic004G131300 Sobic001G178700 Sobic001G178700 Sobic001G291000--Sobic001G178700 Sobic004G113400 Sobic004G113400 Sobic001G291000--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic001G291000--Sobic009G010600 Sobic006G280200 Sobic006G280200 Sobic001G291000--Sobic006G280200 Sobic010G276900 Sobic010G276900 Sobic001G291000--Sobic010G276900 Sobic003G408600 Sobic003G408600 Sobic001G291000--Sobic003G408600 Sobic001G291000--Sobic004G005100 Sobic001G280900 Sobic001G280900 Sobic001G291000--Sobic001G280900 Sobic006G055200 Sobic006G055200 Sobic001G291000--Sobic006G055200 Sobic003G186000 Sobic003G186000 Sobic006G040500--Sobic003G186000 Sobic005G001000 Sobic005G001000 Sobic006G040500--Sobic005G001000 Sobic007G062800 Sobic007G062800 Sobic006G040500--Sobic007G062800 Sobic005G112300 Sobic005G112300 Sobic006G040500--Sobic005G112300 Sobic010G010700 Sobic010G010700 Sobic006G040500--Sobic010G010700 Sobic002G008900 Sobic002G008900 Sobic006G040500--Sobic002G008900 Sobic009G256400 Sobic009G256400 Sobic006G040500--Sobic009G256400 Sobic010G123600 Sobic010G123600 Sobic006G040500--Sobic010G123600 Sobic004G276400 Sobic004G276400 Sobic006G040500--Sobic004G276400 Sobic008G088872--Sobic005G162500 Sobic001G370900 Sobic001G370900 Sobic008G088872--Sobic001G370900 Sobic009G131300 Sobic009G131300 Sobic008G088872--Sobic009G131300 Sobic006G184900 Sobic006G184900 Sobic008G088872--Sobic006G184900 Sobic005G062200 Sobic005G062200 Sobic008G088872--Sobic005G062200 Sobic001G263600 Sobic001G263600 Sobic008G088872--Sobic001G263600 Sobic002G042600 Sobic002G042600 Sobic008G088872--Sobic002G042600 Sobic002G429300 Sobic002G429300 Sobic008G088872--Sobic002G429300 Sobic002G335600 Sobic002G335600 Sobic008G088872--Sobic002G335600 Sobic010G148932--Sobic003G312100 Sobic010G148932--Sobic002G042600 Sobic003G229500 Sobic003G229500 Sobic010G148932--Sobic003G229500 Sobic010G148932--Sobic002G397500 Sobic008G098900 Sobic008G098900 Sobic010G148932--Sobic008G098900 Sobic001G117200 Sobic001G117200 Sobic010G148932--Sobic001G117200 Sobic010G148932--Sobic001G137000 Sobic010G148932--Sobic007G062800 Sobic001G457900 Sobic001G457900 Sobic010G148932--Sobic001G457900 Sobic001G534800 Sobic001G534800 Sobic004G135400--Sobic001G534800 Sobic006G208500 Sobic006G208500 Sobic004G135400--Sobic006G208500 Sobic008G099800 Sobic008G099800 Sobic004G135400--Sobic008G099800 Sobic004G277200 Sobic004G277200 Sobic004G135400--Sobic004G277200 Sobic005G003300 Sobic005G003300 Sobic004G135400--Sobic005G003300 Sobic008G004600 Sobic008G004600 Sobic004G135400--Sobic008G004600 Sobic006G126100 Sobic006G126100 Sobic004G135400--Sobic006G126100 Sobic004G135400--Sobic002G042600 Sobic009G245800 Sobic009G245800 Sobic004G135400--Sobic009G245800 Sobic010G034000--Sobic008G099800 Sobic007G041500 Sobic007G041500 Sobic010G034000--Sobic007G041500 Sobic003G259100 Sobic003G259100 Sobic010G034000--Sobic003G259100 Sobic001G065000 Sobic001G065000 Sobic010G034000--Sobic001G065000 Sobic010G116600 Sobic010G116600 Sobic010G034000--Sobic010G116600 Sobic010G034000--Sobic004G277200 Sobic003G093800 Sobic003G093800 Sobic010G034000--Sobic003G093800 Sobic001G058700 Sobic001G058700 Sobic010G034000--Sobic001G058700 Sobic001G281100 Sobic001G281100 Sobic010G034000--Sobic001G281100 Sobic009G109200 Sobic009G109200 Sobic004G248600--Sobic009G109200 Sobic004G248600--Sobic001G004400 Sobic002G133300 Sobic002G133300 Sobic004G248600--Sobic002G133300 Sobic004G248600--Sobic003G072200 Sobic004G248600--Sobic003G312100 Sobic004G248600--Sobic003G186000 Sobic004G248600--Sobic004G276400 Sobic004G248600--Sobic002G397500 Sobic004G248600--Sobic005G162500
Octagon: transcription factors


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