Gene annotation
Transcriptome id Sobic.010G034000.1
Synonym SOL1, Sb10g003060
Functional annotation zinc carboxypeptidase family protein, putative, expressed
UniProt C5Z3W0
Pfam PF10994
Panther DB PTHR11532 PTHR11532:SF54
NCBI CDD KOG2649; Zinc carboxypeptidase
KEGG Orthology K07752; carboxypeptidase D
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G71696 : carboxypeptidase D, putative
RAP-DB (Rice) LOC_Os06g05240.1 : zinc carboxypeptidase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a050052
Brachypodium PNT76663 , PNT76662 , PNT76666 , PNT76665 , PNT76664 , KQK19917 , KQK19916
Barley HORVU7Hr1G019540.3 , HORVU7Hr1G019540.8 , HORVU7Hr1G019540.9 , HORVU7Hr1G019540.2 , HORVU7Hr1G019540.1 , HORVU7Hr1G019540.6 , HORVU7Hr1G019540.7 , HORVU7Hr1G019540.4 , HORVU7Hr1G019540.5
Wheat TraesCS4A02G386200 , TraesCS7A02G087300 , TraesCS7D02G081800
Populus -


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cDNA sequences
Sobic.010G034000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G099800 expressed protein -
2 Sobic.007G041500 diacylglycerol kinase, putative, expressed -
3 Sobic.003G259100 GPI transamidase component family protein, putative, expressed K05289: GPI-anchor transamidase subunit GAA1
4 Sobic.001G065000 expressed protein -
5 Sobic.010G116600 FHA domain containing protein, putative, expressed -
6 Sobic.004G277200 GPI transamidase subunit PIG-U domain containing protein, expressed K05293: GPI-anchor transamidase subunit U
7 Sobic.003G093800 - K03254: translation initiation factor 3 subunit A
8 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
9 Sobic.001G281100 START domain containing protein, expressed -
10 Sobic.001G219900 expressed protein -
11 Sobic.007G132100 myrosinase precursor, putative, expressed -
12 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
13 Sobic.006G037700 phosphoribulokinase/Uridine kinase family protein, expressed -
14 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
15 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
16 Sobic.004G178200 ligatin, putative, expressed K15027: translation initiation factor 2D
17 Sobic.006G167600 heat shock protein DnaJ, putative, expressed -
18 Sobic.009G010600 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
19 Sobic.003G225700 - -
20 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant


Gene co-expression network
sample Sobic010G034000 Sobic010G034000 Sobic008G099800 Sobic008G099800 Sobic010G034000--Sobic008G099800 Sobic007G041500 Sobic007G041500 Sobic010G034000--Sobic007G041500 Sobic003G259100 Sobic003G259100 Sobic010G034000--Sobic003G259100 Sobic001G065000 Sobic001G065000 Sobic010G034000--Sobic001G065000 Sobic010G116600 Sobic010G116600 Sobic010G034000--Sobic010G116600 Sobic004G277200 Sobic004G277200 Sobic010G034000--Sobic004G277200 Sobic003G093800 Sobic003G093800 Sobic010G034000--Sobic003G093800 Sobic001G058700 Sobic001G058700 Sobic010G034000--Sobic001G058700 Sobic001G281100 Sobic001G281100 Sobic010G034000--Sobic001G281100 Sobic006G012500 Sobic006G012500 Sobic008G099800--Sobic006G012500 Sobic001G534800 Sobic001G534800 Sobic008G099800--Sobic001G534800 Sobic004G135400 Sobic004G135400 Sobic008G099800--Sobic004G135400 Sobic001G347500 Sobic001G347500 Sobic008G099800--Sobic001G347500 Sobic008G099800--Sobic001G281100 Sobic004G113400 Sobic004G113400 Sobic008G099800--Sobic004G113400 Sobic004G039600 Sobic004G039600 Sobic008G099800--Sobic004G039600 Sobic003G072200 Sobic003G072200 Sobic008G099800--Sobic003G072200 Sobic008G099800--Sobic001G065000 Sobic007G119200 Sobic007G119200 Sobic007G041500--Sobic007G119200 Sobic009G148300 Sobic009G148300 Sobic007G041500--Sobic009G148300 Sobic007G041500--Sobic010G034000 Sobic008G153000 Sobic008G153000 Sobic007G041500--Sobic008G153000 Sobic001G091400 Sobic001G091400 Sobic007G041500--Sobic001G091400 Sobic004G246100 Sobic004G246100 Sobic007G041500--Sobic004G246100 Sobic004G072100 Sobic004G072100 Sobic007G041500--Sobic004G072100 Sobic007G041500--Sobic010G116600 Sobic002G071500 Sobic002G071500 Sobic007G041500--Sobic002G071500 Sobic003G259100--Sobic004G113400 Sobic003G259100--Sobic008G099800 Sobic001G050600 Sobic001G050600 Sobic003G259100--Sobic001G050600 Sobic003G259100--Sobic003G072200 Sobic001G273700 Sobic001G273700 Sobic003G259100--Sobic001G273700 Sobic003G259100--Sobic001G058700 Sobic003G259100--Sobic001G347500 Sobic001G219900 Sobic001G219900 Sobic003G259100--Sobic001G219900 Sobic003G259100--Sobic010G034000 Sobic001G114000 Sobic001G114000 Sobic001G065000--Sobic001G114000 Sobic001G065000--Sobic001G281100 Sobic001G065000--Sobic006G012500 Sobic001G065000--Sobic001G534800 Sobic005G118600 Sobic005G118600 Sobic001G065000--Sobic005G118600 Sobic001G065000--Sobic008G099800 Sobic001G065000--Sobic003G093800 Sobic006G037700 Sobic006G037700 Sobic001G065000--Sobic006G037700 Sobic003G229500 Sobic003G229500 Sobic001G065000--Sobic003G229500 Sobic010G116600--Sobic002G071500 Sobic002G299700 Sobic002G299700 Sobic010G116600--Sobic002G299700 Sobic010G116600--Sobic003G093800 Sobic009G044800 Sobic009G044800 Sobic010G116600--Sobic009G044800 Sobic010G116600--Sobic004G072100 Sobic010G236400 Sobic010G236400 Sobic010G116600--Sobic010G236400 Sobic010G275500 Sobic010G275500 Sobic010G116600--Sobic010G275500 Sobic003G408600 Sobic003G408600 Sobic010G116600--Sobic003G408600 Sobic010G053800 Sobic010G053800 Sobic010G116600--Sobic010G053800 Sobic004G277200--Sobic004G135400 Sobic004G277200--Sobic008G099800 Sobic010G118950 Sobic010G118950 Sobic004G277200--Sobic010G118950 Sobic007G225100 Sobic007G225100 Sobic004G277200--Sobic007G225100 Sobic003G104000 Sobic003G104000 Sobic004G277200--Sobic003G104000 Sobic006G208500 Sobic006G208500 Sobic004G277200--Sobic006G208500 Sobic003G332500 Sobic003G332500 Sobic004G277200--Sobic003G332500 Sobic006G200700 Sobic006G200700 Sobic004G277200--Sobic006G200700 Sobic009G201700 Sobic009G201700 Sobic004G277200--Sobic009G201700 Sobic003G093800--Sobic010G116600 Sobic003G093800--Sobic001G065000 Sobic003G093800--Sobic003G408600 Sobic001G536400 Sobic001G536400 Sobic003G093800--Sobic001G536400 Sobic003G093800--Sobic001G058700 Sobic003G093800--Sobic002G299700 Sobic003G093800--Sobic009G044800 Sobic003G093800--Sobic002G071500 Sobic009G249700 Sobic009G249700 Sobic003G093800--Sobic009G249700 Sobic001G058700--Sobic003G408600 Sobic007G172400 Sobic007G172400 Sobic001G058700--Sobic007G172400 Sobic001G058700--Sobic001G050600 Sobic007G062800 Sobic007G062800 Sobic001G058700--Sobic007G062800 Sobic001G540400 Sobic001G540400 Sobic001G058700--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic001G058700--Sobic005G008800 Sobic004G347400 Sobic004G347400 Sobic001G058700--Sobic004G347400 Sobic005G028600 Sobic005G028600 Sobic001G058700--Sobic005G028600 Sobic001G058700--Sobic001G219900 Sobic001G281100--Sobic001G534800 Sobic004G004300 Sobic004G004300 Sobic001G281100--Sobic004G004300 Sobic001G281100--Sobic001G065000 Sobic005G026200 Sobic005G026200 Sobic001G281100--Sobic005G026200 Sobic001G281100--Sobic008G099800 Sobic001G281100--Sobic003G229500 Sobic001G281100--Sobic006G012500 Sobic001G281100--Sobic004G072100 Sobic001G281100--Sobic010G275500
Octagon: transcription factors


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