Gene annotation
Transcriptome id Sobic.004G277200.1
Synonym Sb04g031420
Functional annotation GPI transamidase subunit PIG-U domain containing protein, expressed
UniProt C5Y0U1
Pfam PF06728
Panther DB PTHR13121
NCBI CDD KOG2552; Major facilitator superfamily permease - Cdc91p
KEGG Orthology K05293; GPI-anchor transamidase subunit U
Gene Ontology GO:0016021; integral component of membrane GO:0006506GPI anchor biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G63110 : GPI transamidase subunit PIG-U
RAP-DB (Rice) LOC_Os02g46350.1 : GPI transamidase subunit PIG-U domain containing protein, expressed
MaizeGDB (Corn) Zm00025a021575
Brachypodium -
Barley HORVU2Hr1G032740.21 , HORVU2Hr1G032740.20 , HORVU2Hr1G032740.2 , HORVU2Hr1G032740.3 , HORVU2Hr1G032740.1 , HORVU2Hr1G032740.6 , HORVU2Hr1G032740.7 , HORVU2Hr1G032740.4 , HORVU2Hr1G032740.5 , HORVU2Hr1G032740.8 , HORVU2Hr1G032740.9 , HORVU2Hr1G032740.10 , HORVU2Hr1G032740.11 , HORVU2Hr1G032740.12 , HORVU2Hr1G032740.13 , HORVU2Hr1G032740.14 , HORVU2Hr1G032740.15 , HORVU2Hr1G032740.16 , HORVU2Hr1G032740.17 , HORVU2Hr1G032740.18 , HORVU2Hr1G032740.19
Wheat TraesCS5D02G534500 , TraesCS2A02G176200 , TraesCS2A02G176200 , TraesCS2D02G183600 , TraesCS2B02G202600 , TraesCS2B02G202600 , TraesCS2B02G202600
Populus -


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cDNA sequences
Sobic.004G277200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G135400 expressed protein -
2 Sobic.008G099800 expressed protein -
3 Sobic.010G118950 - -
4 Sobic.007G225100 ZOS8-09 - C2H2 zinc finger protein, expressed -
5 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
6 Sobic.006G208500 proteasome/cyclosome repeat containing protein, expressed K03032: PSMD1, 26S proteasome regulatory subunit N2
7 Sobic.003G332500 EAP30/Vps36 family domain containing protein, expressed K12190: VPS36, ESCRT-II complex subunit VPS36
8 Sobic.006G200700 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
9 Sobic.009G201700 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
10 Sobic.010G034000 zinc carboxypeptidase family protein, putative, expressed K07752: carboxypeptidase D
11 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
12 Sobic.003G279900 bacterial transferase hexapeptide domain containing protein, expressed K00677: UDP-N-acetylglucosamine acyltransferase
13 Sobic.007G060201 - -
14 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
15 Sobic.010G228500 rab geranylgeranyl transferase like protein, putative, expressed K14050: geranylgeranyl transferase type-2 subunit alpha
16 Sobic.001G281100 START domain containing protein, expressed -
17 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
18 Sobic.007G132100 myrosinase precursor, putative, expressed -
19 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
20 Sobic.008G089100 armadillo/beta-catenin repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic004G277200 Sobic004G277200 Sobic004G135400 Sobic004G135400 Sobic004G277200--Sobic004G135400 Sobic008G099800 Sobic008G099800 Sobic004G277200--Sobic008G099800 Sobic010G118950 Sobic010G118950 Sobic004G277200--Sobic010G118950 Sobic007G225100 Sobic007G225100 Sobic004G277200--Sobic007G225100 Sobic003G104000 Sobic003G104000 Sobic004G277200--Sobic003G104000 Sobic006G208500 Sobic006G208500 Sobic004G277200--Sobic006G208500 Sobic003G332500 Sobic003G332500 Sobic004G277200--Sobic003G332500 Sobic006G200700 Sobic006G200700 Sobic004G277200--Sobic006G200700 Sobic009G201700 Sobic009G201700 Sobic004G277200--Sobic009G201700 Sobic001G534800 Sobic001G534800 Sobic004G135400--Sobic001G534800 Sobic004G135400--Sobic006G208500 Sobic004G135400--Sobic008G099800 Sobic004G135400--Sobic004G277200 Sobic005G003300 Sobic005G003300 Sobic004G135400--Sobic005G003300 Sobic008G004600 Sobic008G004600 Sobic004G135400--Sobic008G004600 Sobic006G126100 Sobic006G126100 Sobic004G135400--Sobic006G126100 Sobic002G042600 Sobic002G042600 Sobic004G135400--Sobic002G042600 Sobic009G245800 Sobic009G245800 Sobic004G135400--Sobic009G245800 Sobic006G012500 Sobic006G012500 Sobic008G099800--Sobic006G012500 Sobic008G099800--Sobic001G534800 Sobic008G099800--Sobic004G135400 Sobic001G347500 Sobic001G347500 Sobic008G099800--Sobic001G347500 Sobic001G281100 Sobic001G281100 Sobic008G099800--Sobic001G281100 Sobic004G113400 Sobic004G113400 Sobic008G099800--Sobic004G113400 Sobic004G039600 Sobic004G039600 Sobic008G099800--Sobic004G039600 Sobic003G072200 Sobic003G072200 Sobic008G099800--Sobic003G072200 Sobic001G065000 Sobic001G065000 Sobic008G099800--Sobic001G065000 Sobic004G351100 Sobic004G351100 Sobic010G118950--Sobic004G351100 Sobic010G118950--Sobic004G277200 Sobic010G116600 Sobic010G116600 Sobic010G118950--Sobic010G116600 Sobic010G053800 Sobic010G053800 Sobic010G118950--Sobic010G053800 Sobic002G299700 Sobic002G299700 Sobic010G118950--Sobic002G299700 Sobic001G441400 Sobic001G441400 Sobic010G118950--Sobic001G441400 Sobic004G091100 Sobic004G091100 Sobic010G118950--Sobic004G091100 Sobic010G275500 Sobic010G275500 Sobic010G118950--Sobic010G275500 Sobic001G196500 Sobic001G196500 Sobic010G118950--Sobic001G196500 Sobic007G225100--Sobic004G277200 Sobic001G313700 Sobic001G313700 Sobic007G225100--Sobic001G313700 Sobic002G299000 Sobic002G299000 Sobic007G225100--Sobic002G299000 Sobic003G337300 Sobic003G337300 Sobic007G225100--Sobic003G337300 Sobic002G366400 Sobic002G366400 Sobic007G225100--Sobic002G366400 Sobic007G225100--Sobic003G104000 Sobic007G225100--Sobic008G099800 Sobic001G124200 Sobic001G124200 Sobic007G225100--Sobic001G124200 Sobic002G045600 Sobic002G045600 Sobic007G225100--Sobic002G045600 Sobic003G104000--Sobic003G337300 Sobic002G256700 Sobic002G256700 Sobic003G104000--Sobic002G256700 Sobic003G104000--Sobic006G126100 Sobic001G251100 Sobic001G251100 Sobic003G104000--Sobic001G251100 Sobic002G142900 Sobic002G142900 Sobic003G104000--Sobic002G142900 Sobic002G295500 Sobic002G295500 Sobic003G104000--Sobic002G295500 Sobic003G104000--Sobic004G277200 Sobic004G131300 Sobic004G131300 Sobic003G104000--Sobic004G131300 Sobic006G261400 Sobic006G261400 Sobic003G104000--Sobic006G261400 Sobic006G208500--Sobic004G135400 Sobic003G006400 Sobic003G006400 Sobic006G208500--Sobic003G006400 Sobic006G136400 Sobic006G136400 Sobic006G208500--Sobic006G136400 Sobic006G208500--Sobic009G245800 Sobic006G208500--Sobic006G126100 Sobic006G208500--Sobic004G039600 Sobic006G208500--Sobic006G200700 Sobic001G369000 Sobic001G369000 Sobic006G208500--Sobic001G369000 Sobic006G208500--Sobic004G277200 Sobic003G332500--Sobic003G337300 Sobic003G332500--Sobic004G277200 Sobic003G332500--Sobic003G104000 Sobic003G332500--Sobic006G126100 Sobic001G362200 Sobic001G362200 Sobic003G332500--Sobic001G362200 Sobic007G132100 Sobic007G132100 Sobic003G332500--Sobic007G132100 Sobic004G072100 Sobic004G072100 Sobic003G332500--Sobic004G072100 Sobic001G096000 Sobic001G096000 Sobic003G332500--Sobic001G096000 Sobic010G004100 Sobic010G004100 Sobic003G332500--Sobic010G004100 Sobic004G353000 Sobic004G353000 Sobic006G200700--Sobic004G353000 Sobic006G200700--Sobic006G208500 Sobic008G014500 Sobic008G014500 Sobic006G200700--Sobic008G014500 Sobic006G200700--Sobic010G116600 Sobic006G204800 Sobic006G204800 Sobic006G200700--Sobic006G204800 Sobic001G522600 Sobic001G522600 Sobic006G200700--Sobic001G522600 Sobic006G200700--Sobic003G006400 Sobic006G200700--Sobic004G277200 Sobic009G044800 Sobic009G044800 Sobic006G200700--Sobic009G044800 Sobic009G131300 Sobic009G131300 Sobic009G201700--Sobic009G131300 Sobic007G054800 Sobic007G054800 Sobic009G201700--Sobic007G054800 Sobic006G103200 Sobic006G103200 Sobic009G201700--Sobic006G103200 Sobic004G030900 Sobic004G030900 Sobic009G201700--Sobic004G030900 Sobic009G201700--Sobic004G277200 Sobic010G059500 Sobic010G059500 Sobic009G201700--Sobic010G059500 Sobic006G166200 Sobic006G166200 Sobic009G201700--Sobic006G166200 Sobic009G084900 Sobic009G084900 Sobic009G201700--Sobic009G084900 Sobic002G429300 Sobic002G429300 Sobic009G201700--Sobic002G429300
Octagon: transcription factors


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