Gene annotation
Transcriptome id Sobic.003G279900.6,Sobic.003G279900.7,Sobic.003G279900.8,Sobic.003G279900.5
Synonym Sb03g033150
Functional annotation bacterial transferase hexapeptide domain containing protein, expressed
UniProt A0A1W0VZA6 , A0A1W0VZ91 , A0A1W0VZ74 , A0A1W0VZ85
Pfam PF00132 PF13720 PF13720 PF00132
Panther DB PTHR23416 PTHR23416:SF8
NCBI CDD KOG4042; Dynactin subunit p27/WS-3, involved in transport of organelles along microtubules
KEGG Orthology K00677; UDP-N-acetylglucosamine acyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29540 : bacterial transferase hexapeptide repeat-containing protein
RAP-DB (Rice) LOC_Os01g52400.2,LOC_Os01g52400.1 : bacterial transferase hexapeptide domain containing protein, expressed
MaizeGDB (Corn) Zm00025a038991
Brachypodium PNT72737 , KQK09525 , KQK09526
Barley HORVU3Hr1G068520.8 , HORVU3Hr1G068520.9 , HORVU3Hr1G068520.1 , HORVU3Hr1G068520.2 , HORVU3Hr1G068520.3 , HORVU3Hr1G068520.4 , HORVU3Hr1G068520.6 , HORVU3Hr1G068520.7 , HORVU3Hr1G068520.13 , HORVU3Hr1G068520.10 , HORVU3Hr1G068520.11 , HORVU3Hr1G068520.17 , HORVU3Hr1G068520.14 , HORVU3Hr1G068520.15 , HORVU3Hr1G068520.18 , HORVU3Hr1G068520.19 , HORVU3Hr1G068520.24 , HORVU3Hr1G068520.23 , HORVU3Hr1G068520.22 , HORVU3Hr1G068520.21 , HORVU3Hr1G068520.20 , HORVU3Hr1G068520.25
Wheat TraesCS3B02G320900 , TraesCS3D02G286400 , TraesCS3A02G286700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G277200 GPI transamidase subunit PIG-U domain containing protein, expressed K05293: GPI-anchor transamidase subunit U
2 Sobic.004G135400 expressed protein -
3 Sobic.005G003300 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
4 Sobic.007G060201 - -
5 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
6 Sobic.008G099800 expressed protein -
7 Sobic.001G281100 START domain containing protein, expressed -
8 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
9 Sobic.010G232600 solute carrier family 35 member F5, putative, expressed K15289: solute carrier family 35, member F5
10 Sobic.006G208500 proteasome/cyclosome repeat containing protein, expressed K03032: PSMD1, 26S proteasome regulatory subunit N2
11 Sobic.004G261600 expressed protein -
12 Sobic.006G034500 elongation factor Tu, putative, expressed K03267: ERF3, peptide chain release factor subunit 3
13 Sobic.004G209800 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
14 Sobic.010G279800 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
15 Sobic.002G156000 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
16 Sobic.005G034300 peptidyl-prolyl isomerase, putative, expressed -
17 Sobic.004G339100 endoribonuclease, putative, expressed K06927: diphthine-ammonia ligase
18 Sobic.001G447300 ATP-binding cassette sub-family E member 1, putative, expressed K06174: ABCE1, ATP-binding cassette, sub-family E, member 1
19 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
20 Sobic.002G031100 resistance protein LR10, putative, expressed -


Gene co-expression network
sample Sobic003G279900 Sobic003G279900 Sobic004G277200 Sobic004G277200 Sobic003G279900--Sobic004G277200 Sobic004G135400 Sobic004G135400 Sobic003G279900--Sobic004G135400 Sobic005G003300 Sobic005G003300 Sobic003G279900--Sobic005G003300 Sobic007G060201 Sobic007G060201 Sobic003G279900--Sobic007G060201 Sobic002G430000 Sobic002G430000 Sobic003G279900--Sobic002G430000 Sobic008G099800 Sobic008G099800 Sobic003G279900--Sobic008G099800 Sobic001G281100 Sobic001G281100 Sobic003G279900--Sobic001G281100 Sobic001G534800 Sobic001G534800 Sobic003G279900--Sobic001G534800 Sobic010G232600 Sobic010G232600 Sobic003G279900--Sobic010G232600 Sobic004G277200--Sobic004G135400 Sobic004G277200--Sobic008G099800 Sobic010G118950 Sobic010G118950 Sobic004G277200--Sobic010G118950 Sobic007G225100 Sobic007G225100 Sobic004G277200--Sobic007G225100 Sobic003G104000 Sobic003G104000 Sobic004G277200--Sobic003G104000 Sobic006G208500 Sobic006G208500 Sobic004G277200--Sobic006G208500 Sobic003G332500 Sobic003G332500 Sobic004G277200--Sobic003G332500 Sobic006G200700 Sobic006G200700 Sobic004G277200--Sobic006G200700 Sobic009G201700 Sobic009G201700 Sobic004G277200--Sobic009G201700 Sobic004G135400--Sobic001G534800 Sobic004G135400--Sobic006G208500 Sobic004G135400--Sobic008G099800 Sobic004G135400--Sobic004G277200 Sobic004G135400--Sobic005G003300 Sobic008G004600 Sobic008G004600 Sobic004G135400--Sobic008G004600 Sobic006G126100 Sobic006G126100 Sobic004G135400--Sobic006G126100 Sobic002G042600 Sobic002G042600 Sobic004G135400--Sobic002G042600 Sobic009G245800 Sobic009G245800 Sobic004G135400--Sobic009G245800 Sobic005G003300--Sobic001G534800 Sobic005G026200 Sobic005G026200 Sobic005G003300--Sobic005G026200 Sobic005G003300--Sobic004G135400 Sobic004G004300 Sobic004G004300 Sobic005G003300--Sobic004G004300 Sobic005G003300--Sobic008G004600 Sobic005G003300--Sobic006G126100 Sobic008G003700 Sobic008G003700 Sobic005G003300--Sobic008G003700 Sobic005G003300--Sobic008G099800 Sobic004G039600 Sobic004G039600 Sobic005G003300--Sobic004G039600 Sobic007G060201--Sobic001G281100 Sobic007G060201--Sobic004G277200 Sobic001G207400 Sobic001G207400 Sobic007G060201--Sobic001G207400 Sobic004G269200 Sobic004G269200 Sobic007G060201--Sobic004G269200 Sobic008G087866 Sobic008G087866 Sobic007G060201--Sobic008G087866 Sobic007G060201--Sobic010G118950 Sobic001G050200 Sobic001G050200 Sobic007G060201--Sobic001G050200 Sobic007G060201--Sobic004G135400 Sobic002G045600 Sobic002G045600 Sobic007G060201--Sobic002G045600 Sobic002G430000--Sobic001G207400 Sobic001G117200 Sobic001G117200 Sobic002G430000--Sobic001G117200 Sobic004G355000 Sobic004G355000 Sobic002G430000--Sobic004G355000 Sobic008G098900 Sobic008G098900 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic004G113400 Sobic004G113400 Sobic002G430000--Sobic004G113400 Sobic010G139600 Sobic010G139600 Sobic002G430000--Sobic010G139600 Sobic008G092600 Sobic008G092600 Sobic002G430000--Sobic008G092600 Sobic003G110000 Sobic003G110000 Sobic002G430000--Sobic003G110000 Sobic006G012500 Sobic006G012500 Sobic008G099800--Sobic006G012500 Sobic008G099800--Sobic001G534800 Sobic008G099800--Sobic004G135400 Sobic001G347500 Sobic001G347500 Sobic008G099800--Sobic001G347500 Sobic008G099800--Sobic001G281100 Sobic008G099800--Sobic004G113400 Sobic008G099800--Sobic004G039600 Sobic003G072200 Sobic003G072200 Sobic008G099800--Sobic003G072200 Sobic001G065000 Sobic001G065000 Sobic008G099800--Sobic001G065000 Sobic001G281100--Sobic001G534800 Sobic001G281100--Sobic004G004300 Sobic001G281100--Sobic001G065000 Sobic001G281100--Sobic005G026200 Sobic001G281100--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G281100--Sobic003G229500 Sobic001G281100--Sobic006G012500 Sobic004G072100 Sobic004G072100 Sobic001G281100--Sobic004G072100 Sobic010G275500 Sobic010G275500 Sobic001G281100--Sobic010G275500 Sobic001G534800--Sobic001G281100 Sobic001G534800--Sobic008G099800 Sobic001G534800--Sobic004G004300 Sobic001G534800--Sobic004G135400 Sobic001G534800--Sobic005G003300 Sobic001G534800--Sobic005G026200 Sobic001G534800--Sobic006G012500 Sobic001G534800--Sobic004G113400 Sobic001G534800--Sobic001G065000 Sobic010G232600--Sobic006G126100 Sobic010G232600--Sobic004G004300 Sobic010G232600--Sobic001G281100 Sobic010G232600--Sobic004G135400 Sobic001G415300 Sobic001G415300 Sobic010G232600--Sobic001G415300 Sobic010G232600--Sobic001G050200 Sobic004G261600 Sobic004G261600 Sobic010G232600--Sobic004G261600 Sobic004G351100 Sobic004G351100 Sobic010G232600--Sobic004G351100 Sobic004G178200 Sobic004G178200 Sobic010G232600--Sobic004G178200
Octagon: transcription factors


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