Gene annotation
Transcriptome id Sobic.005G034300.1
Synonym ATFKBP42, FKBP42, TWD1, UCU2, Sb05g002890
Functional annotation peptidyl-prolyl isomerase, putative, expressed
UniProt C5Y4L0
Pfam PF13181 PF13414 PF00254
Panther DB PTHR10516 PTHR10516:SF145
NCBI CDD KOG0543; FKBP-type peptidyl-prolyl cis-trans isomerase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006457protein folding


Orthologs (automatic annotation)
TAIR AT3G21640 : FKBP-type peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os12g05090.1 : peptidyl-prolyl isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a013033
Brachypodium KQJ92317
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G034300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
2 Sobic.002G008800 PTEN, putative, expressed K01110: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
3 Sobic.001G382600 expressed protein -
4 Sobic.004G277200 GPI transamidase subunit PIG-U domain containing protein, expressed K05293: GPI-anchor transamidase subunit U
5 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
6 Sobic.010G228500 rab geranylgeranyl transferase like protein, putative, expressed K14050: geranylgeranyl transferase type-2 subunit alpha
7 Sobic.004G135400 expressed protein -
8 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
9 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
10 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
11 Sobic.002G308500 peptide-Nasparagine amidase, putative, expressed K01456: E3.5.1.52, NGLY1, peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase
12 Sobic.002G111600 expressed protein -
13 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
14 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
15 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
16 Sobic.007G071900 GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
17 Sobic.003G279900 bacterial transferase hexapeptide domain containing protein, expressed K00677: UDP-N-acetylglucosamine acyltransferase
18 Sobic.007G177300 kinetochore protein, putative, expressed K11547: NDC80, HEC1, kinetochore protein NDC80
19 Sobic.002G320100 expressed protein -
20 Sobic.002G364800 COBW domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G034300 Sobic005G034300 Sobic001G199100 Sobic001G199100 Sobic005G034300--Sobic001G199100 Sobic002G008800 Sobic002G008800 Sobic005G034300--Sobic002G008800 Sobic001G382600 Sobic001G382600 Sobic005G034300--Sobic001G382600 Sobic004G277200 Sobic004G277200 Sobic005G034300--Sobic004G277200 Sobic001G033500 Sobic001G033500 Sobic005G034300--Sobic001G033500 Sobic010G228500 Sobic010G228500 Sobic005G034300--Sobic010G228500 Sobic004G135400 Sobic004G135400 Sobic005G034300--Sobic004G135400 Sobic010G020400 Sobic010G020400 Sobic005G034300--Sobic010G020400 Sobic004G275700 Sobic004G275700 Sobic005G034300--Sobic004G275700 Sobic003G012200 Sobic003G012200 Sobic001G199100--Sobic003G012200 Sobic001G199100--Sobic004G275700 Sobic009G075800 Sobic009G075800 Sobic001G199100--Sobic009G075800 Sobic009G207000 Sobic009G207000 Sobic001G199100--Sobic009G207000 Sobic008G093000 Sobic008G093000 Sobic001G199100--Sobic008G093000 Sobic001G091300 Sobic001G091300 Sobic001G199100--Sobic001G091300 Sobic002G226900 Sobic002G226900 Sobic001G199100--Sobic002G226900 Sobic004G206700 Sobic004G206700 Sobic001G199100--Sobic004G206700 Sobic004G348300 Sobic004G348300 Sobic001G199100--Sobic004G348300 Sobic010G261600 Sobic010G261600 Sobic002G008800--Sobic010G261600 Sobic002G008800--Sobic010G020400 Sobic002G262900 Sobic002G262900 Sobic002G008800--Sobic002G262900 Sobic010G223300 Sobic010G223300 Sobic002G008800--Sobic010G223300 Sobic002G008800--Sobic001G382600 Sobic004G177300 Sobic004G177300 Sobic002G008800--Sobic004G177300 Sobic002G008800--Sobic004G275700 Sobic001G333100 Sobic001G333100 Sobic002G008800--Sobic001G333100 Sobic008G055900 Sobic008G055900 Sobic002G008800--Sobic008G055900 Sobic002G299000 Sobic002G299000 Sobic001G382600--Sobic002G299000 Sobic001G382600--Sobic002G008800 Sobic001G065100 Sobic001G065100 Sobic001G382600--Sobic001G065100 Sobic001G118200 Sobic001G118200 Sobic001G382600--Sobic001G118200 Sobic002G111600 Sobic002G111600 Sobic001G382600--Sobic002G111600 Sobic003G337300 Sobic003G337300 Sobic001G382600--Sobic003G337300 Sobic002G020700 Sobic002G020700 Sobic001G382600--Sobic002G020700 Sobic001G382600--Sobic008G055900 Sobic006G131000 Sobic006G131000 Sobic001G382600--Sobic006G131000 Sobic004G277200--Sobic004G135400 Sobic008G099800 Sobic008G099800 Sobic004G277200--Sobic008G099800 Sobic010G118950 Sobic010G118950 Sobic004G277200--Sobic010G118950 Sobic007G225100 Sobic007G225100 Sobic004G277200--Sobic007G225100 Sobic003G104000 Sobic003G104000 Sobic004G277200--Sobic003G104000 Sobic006G208500 Sobic006G208500 Sobic004G277200--Sobic006G208500 Sobic003G332500 Sobic003G332500 Sobic004G277200--Sobic003G332500 Sobic006G200700 Sobic006G200700 Sobic004G277200--Sobic006G200700 Sobic009G201700 Sobic009G201700 Sobic004G277200--Sobic009G201700 Sobic001G283200 Sobic001G283200 Sobic001G033500--Sobic001G283200 Sobic007G184500 Sobic007G184500 Sobic001G033500--Sobic007G184500 Sobic006G148200 Sobic006G148200 Sobic001G033500--Sobic006G148200 Sobic007G118000 Sobic007G118000 Sobic001G033500--Sobic007G118000 Sobic001G085100 Sobic001G085100 Sobic001G033500--Sobic001G085100 Sobic010G073100 Sobic010G073100 Sobic001G033500--Sobic010G073100 Sobic001G458700 Sobic001G458700 Sobic001G033500--Sobic001G458700 Sobic002G113800 Sobic002G113800 Sobic001G033500--Sobic002G113800 Sobic001G033500--Sobic003G012200 Sobic002G308500 Sobic002G308500 Sobic010G228500--Sobic002G308500 Sobic010G228500--Sobic004G277200 Sobic008G103300 Sobic008G103300 Sobic010G228500--Sobic008G103300 Sobic010G219000 Sobic010G219000 Sobic010G228500--Sobic010G219000 Sobic010G228500--Sobic008G099800 Sobic002G189400 Sobic002G189400 Sobic010G228500--Sobic002G189400 Sobic004G339100 Sobic004G339100 Sobic010G228500--Sobic004G339100 Sobic002G405500 Sobic002G405500 Sobic010G228500--Sobic002G405500 Sobic010G228500--Sobic007G225100 Sobic001G534800 Sobic001G534800 Sobic004G135400--Sobic001G534800 Sobic004G135400--Sobic006G208500 Sobic004G135400--Sobic008G099800 Sobic004G135400--Sobic004G277200 Sobic005G003300 Sobic005G003300 Sobic004G135400--Sobic005G003300 Sobic008G004600 Sobic008G004600 Sobic004G135400--Sobic008G004600 Sobic006G126100 Sobic006G126100 Sobic004G135400--Sobic006G126100 Sobic002G042600 Sobic002G042600 Sobic004G135400--Sobic002G042600 Sobic009G245800 Sobic009G245800 Sobic004G135400--Sobic009G245800 Sobic010G020400--Sobic002G020700 Sobic001G049400 Sobic001G049400 Sobic010G020400--Sobic001G049400 Sobic003G338500 Sobic003G338500 Sobic010G020400--Sobic003G338500 Sobic001G014800 Sobic001G014800 Sobic010G020400--Sobic001G014800 Sobic010G020400--Sobic002G008800 Sobic010G020400--Sobic008G055900 Sobic008G033500 Sobic008G033500 Sobic010G020400--Sobic008G033500 Sobic010G020400--Sobic001G333100 Sobic010G020400--Sobic010G223300 Sobic004G275700--Sobic001G199100 Sobic004G275700--Sobic001G091300 Sobic004G275700--Sobic009G075800 Sobic004G275700--Sobic002G262900 Sobic001G007000 Sobic001G007000 Sobic004G275700--Sobic001G007000 Sobic004G275700--Sobic010G020400 Sobic004G275700--Sobic002G008800 Sobic003G365300 Sobic003G365300 Sobic004G275700--Sobic003G365300 Sobic004G275700--Sobic003G012200
Octagon: transcription factors


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