Gene annotation
Transcriptome id Sobic.002G111600.2,Sobic.002G111600.3,Sobic.002G111600.1
Synonym Sb02g009550
Functional annotation expressed protein
UniProt A0A1B6QAI9 , A0A1B6QAI5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28250 : -
RAP-DB (Rice) LOC_Os07g20410.1 : expressed protein
MaizeGDB (Corn) Zm00025a045696
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G111600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G382600 expressed protein -
2 Sobic.007G132100 myrosinase precursor, putative, expressed -
3 Sobic.007G225100 ZOS8-09 - C2H2 zinc finger protein, expressed -
4 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
5 Sobic.001G142100 WD domain, G-beta repeat domain containing protein, expressed K04536: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
6 Sobic.008G164600 expressed protein -
7 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
8 Sobic.009G088000 expressed protein -
9 Sobic.010G118000 PHD-finger family protein, expressed K17586: PHD and RING finger domain-containing protein 1
10 Sobic.007G184500 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
11 Sobic.002G361400 frigida, putative, expressed -
12 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
13 Sobic.010G228500 rab geranylgeranyl transferase like protein, putative, expressed K14050: geranylgeranyl transferase type-2 subunit alpha
14 Sobic.002G405500 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11841: USP10, ubiquitin carboxyl-terminal hydrolase 10
15 Sobic.008G099800 expressed protein -
16 Sobic.008G112800 pre-mRNA-processing factor 6, putative, expressed K12855: PRPF6, pre-mRNA-processing factor 6
17 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
18 Sobic.010G204400 phox domain-containing protein, putative, expressed -
19 Sobic.005G004200 GIL1, putative, expressed -
20 Sobic.005G110409 - -


Gene co-expression network
sample Sobic002G111600 Sobic002G111600 Sobic001G382600 Sobic001G382600 Sobic002G111600--Sobic001G382600 Sobic007G132100 Sobic007G132100 Sobic002G111600--Sobic007G132100 Sobic007G225100 Sobic007G225100 Sobic002G111600--Sobic007G225100 Sobic008G103300 Sobic008G103300 Sobic002G111600--Sobic008G103300 Sobic001G142100 Sobic001G142100 Sobic002G111600--Sobic001G142100 Sobic008G164600 Sobic008G164600 Sobic002G111600--Sobic008G164600 Sobic006G240100 Sobic006G240100 Sobic002G111600--Sobic006G240100 Sobic009G088000 Sobic009G088000 Sobic002G111600--Sobic009G088000 Sobic010G118000 Sobic010G118000 Sobic002G111600--Sobic010G118000 Sobic002G299000 Sobic002G299000 Sobic001G382600--Sobic002G299000 Sobic002G008800 Sobic002G008800 Sobic001G382600--Sobic002G008800 Sobic001G065100 Sobic001G065100 Sobic001G382600--Sobic001G065100 Sobic001G118200 Sobic001G118200 Sobic001G382600--Sobic001G118200 Sobic001G382600--Sobic002G111600 Sobic003G337300 Sobic003G337300 Sobic001G382600--Sobic003G337300 Sobic002G020700 Sobic002G020700 Sobic001G382600--Sobic002G020700 Sobic008G055900 Sobic008G055900 Sobic001G382600--Sobic008G055900 Sobic006G131000 Sobic006G131000 Sobic001G382600--Sobic006G131000 Sobic007G218000 Sobic007G218000 Sobic007G132100--Sobic007G218000 Sobic004G072100 Sobic004G072100 Sobic007G132100--Sobic004G072100 Sobic004G039600 Sobic004G039600 Sobic007G132100--Sobic004G039600 Sobic004G178200 Sobic004G178200 Sobic007G132100--Sobic004G178200 Sobic007G132100--Sobic006G131000 Sobic006G012500 Sobic006G012500 Sobic007G132100--Sobic006G012500 Sobic009G044800 Sobic009G044800 Sobic007G132100--Sobic009G044800 Sobic008G099800 Sobic008G099800 Sobic007G132100--Sobic008G099800 Sobic010G204400 Sobic010G204400 Sobic007G132100--Sobic010G204400 Sobic004G277200 Sobic004G277200 Sobic007G225100--Sobic004G277200 Sobic001G313700 Sobic001G313700 Sobic007G225100--Sobic001G313700 Sobic007G225100--Sobic002G299000 Sobic007G225100--Sobic003G337300 Sobic002G366400 Sobic002G366400 Sobic007G225100--Sobic002G366400 Sobic003G104000 Sobic003G104000 Sobic007G225100--Sobic003G104000 Sobic007G225100--Sobic008G099800 Sobic001G124200 Sobic001G124200 Sobic007G225100--Sobic001G124200 Sobic002G045600 Sobic002G045600 Sobic007G225100--Sobic002G045600 Sobic008G103300--Sobic008G055900 Sobic002G371700 Sobic002G371700 Sobic008G103300--Sobic002G371700 Sobic003G046300 Sobic003G046300 Sobic008G103300--Sobic003G046300 Sobic003G132000 Sobic003G132000 Sobic008G103300--Sobic003G132000 Sobic005G074500 Sobic005G074500 Sobic008G103300--Sobic005G074500 Sobic001G114500 Sobic001G114500 Sobic008G103300--Sobic001G114500 Sobic001G145400 Sobic001G145400 Sobic008G103300--Sobic001G145400 Sobic006G200700 Sobic006G200700 Sobic008G103300--Sobic006G200700 Sobic002G295500 Sobic002G295500 Sobic008G103300--Sobic002G295500 Sobic005G004200 Sobic005G004200 Sobic001G142100--Sobic005G004200 Sobic008G131000 Sobic008G131000 Sobic001G142100--Sobic008G131000 Sobic003G187500 Sobic003G187500 Sobic001G142100--Sobic003G187500 Sobic005G216300 Sobic005G216300 Sobic001G142100--Sobic005G216300 Sobic003G401100 Sobic003G401100 Sobic001G142100--Sobic003G401100 Sobic006G252700 Sobic006G252700 Sobic001G142100--Sobic006G252700 Sobic003G439800 Sobic003G439800 Sobic001G142100--Sobic003G439800 Sobic006G114500 Sobic006G114500 Sobic001G142100--Sobic006G114500 Sobic003G114700 Sobic003G114700 Sobic001G142100--Sobic003G114700 Sobic010G266500 Sobic010G266500 Sobic008G164600--Sobic010G266500 Sobic006G040800 Sobic006G040800 Sobic008G164600--Sobic006G040800 Sobic008G164600--Sobic001G145400 Sobic008G164600--Sobic007G225100 Sobic004G256500 Sobic004G256500 Sobic008G164600--Sobic004G256500 Sobic008G164600--Sobic010G118000 Sobic002G145800 Sobic002G145800 Sobic008G164600--Sobic002G145800 Sobic004G246100 Sobic004G246100 Sobic008G164600--Sobic004G246100 Sobic009G255600 Sobic009G255600 Sobic008G164600--Sobic009G255600 Sobic006G240100--Sobic009G044800 Sobic003G416700 Sobic003G416700 Sobic006G240100--Sobic003G416700 Sobic002G154000 Sobic002G154000 Sobic006G240100--Sobic002G154000 Sobic006G240100--Sobic007G132100 Sobic006G240100--Sobic007G218000 Sobic003G360400 Sobic003G360400 Sobic006G240100--Sobic003G360400 Sobic006G240100--Sobic010G204400 Sobic001G354600 Sobic001G354600 Sobic006G240100--Sobic001G354600 Sobic006G240100--Sobic004G072100 Sobic008G002500 Sobic008G002500 Sobic009G088000--Sobic008G002500 Sobic009G088000--Sobic006G040800 Sobic002G126300 Sobic002G126300 Sobic009G088000--Sobic002G126300 Sobic003G294600 Sobic003G294600 Sobic009G088000--Sobic003G294600 Sobic003G164200 Sobic003G164200 Sobic009G088000--Sobic003G164200 Sobic005G200900 Sobic005G200900 Sobic009G088000--Sobic005G200900 Sobic002G137200 Sobic002G137200 Sobic009G088000--Sobic002G137200 Sobic004G355800 Sobic004G355800 Sobic009G088000--Sobic004G355800 Sobic010G236400 Sobic010G236400 Sobic009G088000--Sobic010G236400 Sobic002G371300 Sobic002G371300 Sobic010G118000--Sobic002G371300 Sobic006G148100 Sobic006G148100 Sobic010G118000--Sobic006G148100 Sobic010G118000--Sobic009G255600 Sobic003G266001 Sobic003G266001 Sobic010G118000--Sobic003G266001 Sobic010G118000--Sobic010G266500 Sobic009G143800 Sobic009G143800 Sobic010G118000--Sobic009G143800 Sobic004G353000 Sobic004G353000 Sobic010G118000--Sobic004G353000 Sobic010G118000--Sobic007G225100 Sobic008G014500 Sobic008G014500 Sobic010G118000--Sobic008G014500
Octagon: transcription factors


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