Gene annotation
Transcriptome id Sobic.007G184500.1
Synonym MAP2B, Sb07g025460
Functional annotation peptidase, M24 family protein, putative, expressed
UniProt C5YH94
Pfam PF00557
Panther DB PTHR10804 PTHR10804:SF9
NCBI CDD -
KEGG Orthology K01265; methionyl aminopeptidase
Gene Ontology GO:0008235; metalloexopeptidase activity GO:0006508proteolysis GO:0004177aminopeptidase activity


Orthologs (automatic annotation)
TAIR AT3G59990 : methionine aminopeptidase 2B
RAP-DB (Rice) LOC_Os12g43370.1 : peptidase, M24 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a030182
Brachypodium KQJ99222
Barley HORVU7Hr1G056420.4 , HORVU7Hr1G056420.5 , HORVU7Hr1G056420.6 , HORVU7Hr1G056420.1 , HORVU7Hr1G056420.2 , HORVU7Hr1G056420.3
Wheat TraesCS7B02G166300 , TraesCS7B02G166300 , TraesCS3B02G589600 , TraesCS7D02G268600 , TraesCS7D02G268600 , TraesCS3B02G589000 , TraesCS7A02G266100 , TraesCS7A02G266100
Populus -


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cDNA sequences
Sobic.007G184500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G360200 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
2 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
3 Sobic.007G077400 dehydrogenase, putative, expressed K07512: MECR, mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase
4 Sobic.006G044600 eukaryotic translation initiation factor 3 subunit H, putative, expressed K03247: translation initiation factor 3 subunit H
5 Sobic.009G058500 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
6 Sobic.006G278700 expressed protein -
7 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
8 Sobic.004G178200 ligatin, putative, expressed K15027: translation initiation factor 2D
9 Sobic.010G073100 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
10 Sobic.001G091300 HTH DNA-binding protein, putative, expressed -
11 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
12 Sobic.009G228700 expressed protein -
13 Sobic.006G136400 eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed K03260: translation initiation factor 4G
14 Sobic.002G111600 expressed protein -
15 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
16 Sobic.009G226400 dynamin family protein, putative, expressed -
17 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
18 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
19 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
20 Sobic.001G512300 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2


Gene co-expression network
sample Sobic007G184500 Sobic007G184500 Sobic001G360200 Sobic001G360200 Sobic007G184500--Sobic001G360200 Sobic001G033500 Sobic001G033500 Sobic007G184500--Sobic001G033500 Sobic007G077400 Sobic007G077400 Sobic007G184500--Sobic007G077400 Sobic006G044600 Sobic006G044600 Sobic007G184500--Sobic006G044600 Sobic009G058500 Sobic009G058500 Sobic007G184500--Sobic009G058500 Sobic006G278700 Sobic006G278700 Sobic007G184500--Sobic006G278700 Sobic004G353000 Sobic004G353000 Sobic007G184500--Sobic004G353000 Sobic004G178200 Sobic004G178200 Sobic007G184500--Sobic004G178200 Sobic010G073100 Sobic010G073100 Sobic007G184500--Sobic010G073100 Sobic001G360200--Sobic006G278700 Sobic004G066200 Sobic004G066200 Sobic001G360200--Sobic004G066200 Sobic001G360200--Sobic007G184500 Sobic006G252700 Sobic006G252700 Sobic001G360200--Sobic006G252700 Sobic002G300700 Sobic002G300700 Sobic001G360200--Sobic002G300700 Sobic001G143500 Sobic001G143500 Sobic001G360200--Sobic001G143500 Sobic001G360200--Sobic009G058500 Sobic009G228700 Sobic009G228700 Sobic001G360200--Sobic009G228700 Sobic006G101700 Sobic006G101700 Sobic001G360200--Sobic006G101700 Sobic001G283200 Sobic001G283200 Sobic001G033500--Sobic001G283200 Sobic001G033500--Sobic007G184500 Sobic006G148200 Sobic006G148200 Sobic001G033500--Sobic006G148200 Sobic007G118000 Sobic007G118000 Sobic001G033500--Sobic007G118000 Sobic001G085100 Sobic001G085100 Sobic001G033500--Sobic001G085100 Sobic001G033500--Sobic010G073100 Sobic001G458700 Sobic001G458700 Sobic001G033500--Sobic001G458700 Sobic002G113800 Sobic002G113800 Sobic001G033500--Sobic002G113800 Sobic003G012200 Sobic003G012200 Sobic001G033500--Sobic003G012200 Sobic007G077400--Sobic007G184500 Sobic006G182200 Sobic006G182200 Sobic007G077400--Sobic006G182200 Sobic007G077400--Sobic001G033500 Sobic003G051200 Sobic003G051200 Sobic007G077400--Sobic003G051200 Sobic007G077400--Sobic004G353000 Sobic002G418700 Sobic002G418700 Sobic007G077400--Sobic002G418700 Sobic001G323000 Sobic001G323000 Sobic007G077400--Sobic001G323000 Sobic010G130000 Sobic010G130000 Sobic007G077400--Sobic010G130000 Sobic001G466700 Sobic001G466700 Sobic007G077400--Sobic001G466700 Sobic002G341800 Sobic002G341800 Sobic006G044600--Sobic002G341800 Sobic004G194900 Sobic004G194900 Sobic006G044600--Sobic004G194900 Sobic002G394600 Sobic002G394600 Sobic006G044600--Sobic002G394600 Sobic006G044600--Sobic007G184500 Sobic007G166400 Sobic007G166400 Sobic006G044600--Sobic007G166400 Sobic006G044600--Sobic001G458700 Sobic002G077900 Sobic002G077900 Sobic006G044600--Sobic002G077900 Sobic006G044600--Sobic009G058500 Sobic008G055900 Sobic008G055900 Sobic006G044600--Sobic008G055900 Sobic009G058500--Sobic001G360200 Sobic009G058500--Sobic007G184500 Sobic010G018700 Sobic010G018700 Sobic009G058500--Sobic010G018700 Sobic009G058500--Sobic002G077900 Sobic003G439800 Sobic003G439800 Sobic009G058500--Sobic003G439800 Sobic003G074400 Sobic003G074400 Sobic009G058500--Sobic003G074400 Sobic009G058500--Sobic006G278700 Sobic009G058500--Sobic006G044600 Sobic004G346100 Sobic004G346100 Sobic009G058500--Sobic004G346100 Sobic002G378200 Sobic002G378200 Sobic006G278700--Sobic002G378200 Sobic006G278700--Sobic006G252700 Sobic007G205000 Sobic007G205000 Sobic006G278700--Sobic007G205000 Sobic006G278700--Sobic001G360200 Sobic003G401100 Sobic003G401100 Sobic006G278700--Sobic003G401100 Sobic006G278700--Sobic001G143500 Sobic001G226000 Sobic001G226000 Sobic006G278700--Sobic001G226000 Sobic007G118200 Sobic007G118200 Sobic006G278700--Sobic007G118200 Sobic008G004400 Sobic008G004400 Sobic006G278700--Sobic008G004400 Sobic006G200700 Sobic006G200700 Sobic004G353000--Sobic006G200700 Sobic009G143800 Sobic009G143800 Sobic004G353000--Sobic009G143800 Sobic010G116600 Sobic010G116600 Sobic004G353000--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic004G353000--Sobic007G183900 Sobic002G371300 Sobic002G371300 Sobic004G353000--Sobic002G371300 Sobic002G371700 Sobic002G371700 Sobic004G353000--Sobic002G371700 Sobic009G044800 Sobic009G044800 Sobic004G353000--Sobic009G044800 Sobic001G473600 Sobic001G473600 Sobic004G353000--Sobic001G473600 Sobic001G291800 Sobic001G291800 Sobic004G353000--Sobic001G291800 Sobic007G132100 Sobic007G132100 Sobic004G178200--Sobic007G132100 Sobic007G218000 Sobic007G218000 Sobic004G178200--Sobic007G218000 Sobic006G136400 Sobic006G136400 Sobic004G178200--Sobic006G136400 Sobic006G131000 Sobic006G131000 Sobic004G178200--Sobic006G131000 Sobic006G126100 Sobic006G126100 Sobic004G178200--Sobic006G126100 Sobic006G012500 Sobic006G012500 Sobic004G178200--Sobic006G012500 Sobic004G178200--Sobic010G116600 Sobic002G303600 Sobic002G303600 Sobic004G178200--Sobic002G303600 Sobic004G039600 Sobic004G039600 Sobic004G178200--Sobic004G039600 Sobic010G073100--Sobic002G113800 Sobic008G145100 Sobic008G145100 Sobic010G073100--Sobic008G145100 Sobic010G073100--Sobic007G184500 Sobic010G073100--Sobic001G033500 Sobic006G203100 Sobic006G203100 Sobic010G073100--Sobic006G203100 Sobic004G010900 Sobic004G010900 Sobic010G073100--Sobic004G010900 Sobic002G281300 Sobic002G281300 Sobic010G073100--Sobic002G281300 Sobic010G073100--Sobic006G044600 Sobic001G010700 Sobic001G010700 Sobic010G073100--Sobic001G010700
Octagon: transcription factors


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