Gene annotation
Transcriptome id Sobic.001G512300.1
Synonym VDAC4, ATVDAC4, Sb01g047800
Functional annotation outer mitochondrial membrane porin, putative, expressed
UniProt Q1KSB8 , C5WYZ2
Pfam PF01459
Panther DB PTHR11743 PTHR11743:SF27
NCBI CDD KOG3126; Porin/voltage-dependent anion-selective channel protein
KEGG Orthology K15040; voltage-dependent anion channel protein 2
Gene Ontology GO:0005741; mitochondrial outer membrane


Orthologs (automatic annotation)
TAIR AT5G57490 : voltage dependent anion channel 4
RAP-DB (Rice) LOC_Os03g04460.1 : outer mitochondrial membrane porin, putative, expressed
MaizeGDB (Corn) Zm00025a053385 , Zm00025a000528
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G512300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G091300 HTH DNA-binding protein, putative, expressed -
2 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
3 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
4 Sobic.001G085100 expressed protein -
5 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
6 Sobic.001G360200 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
7 Sobic.009G123600 tungus CG8253-PA, putative, expressed -
8 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
9 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
10 Sobic.001G388200 ELMO/CED-12 family protein, putative, expressed -
11 Sobic.010G000900 spotted leaf 11, putative, expressed -
12 Sobic.004G356900 - K13025: EIF4A3, ATP-dependent RNA helicase
13 Sobic.003G261400 DUF292 domain containing protein, expressed -
14 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
15 Sobic.004G212200 enhancer of rudimentary protein, putative, expressed -
16 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
17 Sobic.009G228800 dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed K09658: dolichol phosphate-mannose biosynthesis regulatory protein
18 Sobic.004G194900 expressed protein -
19 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
20 Sobic.009G228700 expressed protein -


Gene co-expression network
sample Sobic001G512300 Sobic001G512300 Sobic001G091300 Sobic001G091300 Sobic001G512300--Sobic001G091300 Sobic006G101700 Sobic006G101700 Sobic001G512300--Sobic006G101700 Sobic002G281300 Sobic002G281300 Sobic001G512300--Sobic002G281300 Sobic001G085100 Sobic001G085100 Sobic001G512300--Sobic001G085100 Sobic009G207000 Sobic009G207000 Sobic001G512300--Sobic009G207000 Sobic001G360200 Sobic001G360200 Sobic001G512300--Sobic001G360200 Sobic009G123600 Sobic009G123600 Sobic001G512300--Sobic009G123600 Sobic004G066200 Sobic004G066200 Sobic001G512300--Sobic004G066200 Sobic003G007500 Sobic003G007500 Sobic001G512300--Sobic003G007500 Sobic009G228700 Sobic009G228700 Sobic001G091300--Sobic009G228700 Sobic003G312200 Sobic003G312200 Sobic001G091300--Sobic003G312200 Sobic004G275700 Sobic004G275700 Sobic001G091300--Sobic004G275700 Sobic001G091300--Sobic004G066200 Sobic001G091300--Sobic001G085100 Sobic001G091300--Sobic001G512300 Sobic001G261436 Sobic001G261436 Sobic001G091300--Sobic001G261436 Sobic001G199100 Sobic001G199100 Sobic001G091300--Sobic001G199100 Sobic002G303600 Sobic002G303600 Sobic001G091300--Sobic002G303600 Sobic006G101700--Sobic004G066200 Sobic007G166400 Sobic007G166400 Sobic006G101700--Sobic007G166400 Sobic006G101700--Sobic001G085100 Sobic001G080700 Sobic001G080700 Sobic006G101700--Sobic001G080700 Sobic009G222500 Sobic009G222500 Sobic006G101700--Sobic009G222500 Sobic009G165800 Sobic009G165800 Sobic006G101700--Sobic009G165800 Sobic002G192200 Sobic002G192200 Sobic006G101700--Sobic002G192200 Sobic006G049700 Sobic006G049700 Sobic006G101700--Sobic006G049700 Sobic006G101700--Sobic001G512300 Sobic003G261400 Sobic003G261400 Sobic002G281300--Sobic003G261400 Sobic006G250900 Sobic006G250900 Sobic002G281300--Sobic006G250900 Sobic002G281300--Sobic003G007500 Sobic001G067900 Sobic001G067900 Sobic002G281300--Sobic001G067900 Sobic010G205300 Sobic010G205300 Sobic002G281300--Sobic010G205300 Sobic001G388200 Sobic001G388200 Sobic002G281300--Sobic001G388200 Sobic004G194900 Sobic004G194900 Sobic002G281300--Sobic004G194900 Sobic001G054200 Sobic001G054200 Sobic002G281300--Sobic001G054200 Sobic003G349300 Sobic003G349300 Sobic002G281300--Sobic003G349300 Sobic001G085100--Sobic006G101700 Sobic001G085100--Sobic001G261436 Sobic006G148200 Sobic006G148200 Sobic001G085100--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G085100--Sobic007G167900 Sobic001G206900 Sobic001G206900 Sobic001G085100--Sobic001G206900 Sobic001G047400 Sobic001G047400 Sobic001G085100--Sobic001G047400 Sobic001G085100--Sobic004G066200 Sobic001G085100--Sobic001G091300 Sobic003G012200 Sobic003G012200 Sobic001G085100--Sobic003G012200 Sobic009G207000--Sobic009G228700 Sobic009G207000--Sobic004G066200 Sobic009G207000--Sobic001G199100 Sobic001G323000 Sobic001G323000 Sobic009G207000--Sobic001G323000 Sobic009G207000--Sobic001G085100 Sobic006G249700 Sobic006G249700 Sobic009G207000--Sobic006G249700 Sobic009G207000--Sobic006G148200 Sobic010G000900 Sobic010G000900 Sobic009G207000--Sobic010G000900 Sobic009G207000--Sobic003G012200 Sobic006G278700 Sobic006G278700 Sobic001G360200--Sobic006G278700 Sobic001G360200--Sobic004G066200 Sobic007G184500 Sobic007G184500 Sobic001G360200--Sobic007G184500 Sobic006G252700 Sobic006G252700 Sobic001G360200--Sobic006G252700 Sobic002G300700 Sobic002G300700 Sobic001G360200--Sobic002G300700 Sobic001G143500 Sobic001G143500 Sobic001G360200--Sobic001G143500 Sobic009G058500 Sobic009G058500 Sobic001G360200--Sobic009G058500 Sobic001G360200--Sobic009G228700 Sobic001G360200--Sobic006G101700 Sobic002G059300 Sobic002G059300 Sobic009G123600--Sobic002G059300 Sobic009G123600--Sobic009G222500 Sobic009G123600--Sobic001G085100 Sobic003G099100 Sobic003G099100 Sobic009G123600--Sobic003G099100 Sobic009G123600--Sobic001G199100 Sobic009G123600--Sobic001G512300 Sobic004G206700 Sobic004G206700 Sobic009G123600--Sobic004G206700 Sobic009G123600--Sobic003G012200 Sobic007G166100 Sobic007G166100 Sobic009G123600--Sobic007G166100 Sobic001G356600 Sobic001G356600 Sobic004G066200--Sobic001G356600 Sobic004G066200--Sobic009G228700 Sobic004G066200--Sobic006G101700 Sobic004G066200--Sobic001G080700 Sobic001G392300 Sobic001G392300 Sobic004G066200--Sobic001G392300 Sobic003G352200 Sobic003G352200 Sobic004G066200--Sobic003G352200 Sobic003G248200 Sobic003G248200 Sobic004G066200--Sobic003G248200 Sobic004G353200 Sobic004G353200 Sobic004G066200--Sobic004G353200 Sobic004G066200--Sobic001G091300 Sobic007G186300 Sobic007G186300 Sobic003G007500--Sobic007G186300 Sobic010G083700 Sobic010G083700 Sobic003G007500--Sobic010G083700 Sobic010G168600 Sobic010G168600 Sobic003G007500--Sobic010G168600 Sobic001G078500 Sobic001G078500 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic001G051200 Sobic001G051200 Sobic003G007500--Sobic001G051200 Sobic004G072800 Sobic004G072800 Sobic003G007500--Sobic004G072800 Sobic004G104900 Sobic004G104900 Sobic003G007500--Sobic004G104900 Sobic003G007500--Sobic002G281300
Octagon: transcription factors


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