Gene annotation
Transcriptome id Sobic.004G194900.1
Synonym Sb04g024210
Functional annotation expressed protein
UniProt C5XWB9
Pfam -
Panther DB PTHR37221
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07640 : -
RAP-DB (Rice) LOC_Os02g37150.1 : expressed protein
MaizeGDB (Corn) Zm00025a021386
Brachypodium KQK00070
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G194900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G205300 secreted salivary protein, putative, expressed -
2 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
3 Sobic.006G044600 eukaryotic translation initiation factor 3 subunit H, putative, expressed K03247: translation initiation factor 3 subunit H
4 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
5 Sobic.009G225000 transmembrane protein 93, putative, expressed -
6 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -
7 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
8 Sobic.001G085100 expressed protein -
9 Sobic.005G111900 uncharacterized protein family UPF0016 domain containing protein, expressed -
10 Sobic.001G461900 vesicle transport protein GOT1B, putative, expressed -
11 Sobic.004G206700 vesicle transport protein GOT1B, putative, expressed -
12 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
13 Sobic.004G181900 expressed protein -
14 Sobic.007G142500 EF hand family protein, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
15 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
16 Sobic.001G512300 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
17 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
18 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
19 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
20 Sobic.009G149500 coiled-coil domain-containing protein 47 precursor, putative, expressed -


Gene co-expression network
sample Sobic004G194900 Sobic004G194900 Sobic010G205300 Sobic010G205300 Sobic004G194900--Sobic010G205300 Sobic002G281300 Sobic002G281300 Sobic004G194900--Sobic002G281300 Sobic006G044600 Sobic006G044600 Sobic004G194900--Sobic006G044600 Sobic003G349300 Sobic003G349300 Sobic004G194900--Sobic003G349300 Sobic009G225000 Sobic009G225000 Sobic004G194900--Sobic009G225000 Sobic004G310500 Sobic004G310500 Sobic004G194900--Sobic004G310500 Sobic001G458700 Sobic001G458700 Sobic004G194900--Sobic001G458700 Sobic001G085100 Sobic001G085100 Sobic004G194900--Sobic001G085100 Sobic005G111900 Sobic005G111900 Sobic004G194900--Sobic005G111900 Sobic004G232800 Sobic004G232800 Sobic010G205300--Sobic004G232800 Sobic010G205300--Sobic003G349300 Sobic007G168600 Sobic007G168600 Sobic010G205300--Sobic007G168600 Sobic001G502200 Sobic001G502200 Sobic010G205300--Sobic001G502200 Sobic010G205300--Sobic002G281300 Sobic004G356900 Sobic004G356900 Sobic010G205300--Sobic004G356900 Sobic003G261400 Sobic003G261400 Sobic010G205300--Sobic003G261400 Sobic010G205300--Sobic004G194900 Sobic001G067900 Sobic001G067900 Sobic010G205300--Sobic001G067900 Sobic002G281300--Sobic003G261400 Sobic006G250900 Sobic006G250900 Sobic002G281300--Sobic006G250900 Sobic003G007500 Sobic003G007500 Sobic002G281300--Sobic003G007500 Sobic002G281300--Sobic001G067900 Sobic002G281300--Sobic010G205300 Sobic001G388200 Sobic001G388200 Sobic002G281300--Sobic001G388200 Sobic002G281300--Sobic004G194900 Sobic001G054200 Sobic001G054200 Sobic002G281300--Sobic001G054200 Sobic002G281300--Sobic003G349300 Sobic002G341800 Sobic002G341800 Sobic006G044600--Sobic002G341800 Sobic006G044600--Sobic004G194900 Sobic002G394600 Sobic002G394600 Sobic006G044600--Sobic002G394600 Sobic007G184500 Sobic007G184500 Sobic006G044600--Sobic007G184500 Sobic007G166400 Sobic007G166400 Sobic006G044600--Sobic007G166400 Sobic006G044600--Sobic001G458700 Sobic002G077900 Sobic002G077900 Sobic006G044600--Sobic002G077900 Sobic009G058500 Sobic009G058500 Sobic006G044600--Sobic009G058500 Sobic008G055900 Sobic008G055900 Sobic006G044600--Sobic008G055900 Sobic003G349300--Sobic010G205300 Sobic001G294900 Sobic001G294900 Sobic003G349300--Sobic001G294900 Sobic009G135600 Sobic009G135600 Sobic003G349300--Sobic009G135600 Sobic003G349300--Sobic001G388200 Sobic004G181900 Sobic004G181900 Sobic003G349300--Sobic004G181900 Sobic009G192000 Sobic009G192000 Sobic003G349300--Sobic009G192000 Sobic001G283200 Sobic001G283200 Sobic003G349300--Sobic001G283200 Sobic003G349300--Sobic003G261400 Sobic003G349300--Sobic007G168600 Sobic006G281800 Sobic006G281800 Sobic009G225000--Sobic006G281800 Sobic009G225000--Sobic001G283200 Sobic009G225000--Sobic004G194900 Sobic009G225000--Sobic004G181900 Sobic001G461900 Sobic001G461900 Sobic009G225000--Sobic001G461900 Sobic007G142500 Sobic007G142500 Sobic009G225000--Sobic007G142500 Sobic001G460600 Sobic001G460600 Sobic009G225000--Sobic001G460600 Sobic004G206700 Sobic004G206700 Sobic009G225000--Sobic004G206700 Sobic009G225000--Sobic003G349300 Sobic004G310500--Sobic004G194900 Sobic009G075800 Sobic009G075800 Sobic004G310500--Sobic009G075800 Sobic004G310500--Sobic006G044600 Sobic004G310500--Sobic001G283200 Sobic009G257600 Sobic009G257600 Sobic004G310500--Sobic009G257600 Sobic008G156700 Sobic008G156700 Sobic004G310500--Sobic008G156700 Sobic001G512300 Sobic001G512300 Sobic004G310500--Sobic001G512300 Sobic004G310500--Sobic002G394600 Sobic009G222500 Sobic009G222500 Sobic004G310500--Sobic009G222500 Sobic007G176200 Sobic007G176200 Sobic001G458700--Sobic007G176200 Sobic006G252200 Sobic006G252200 Sobic001G458700--Sobic006G252200 Sobic001G010700 Sobic001G010700 Sobic001G458700--Sobic001G010700 Sobic001G458700--Sobic002G341800 Sobic004G224900 Sobic004G224900 Sobic001G458700--Sobic004G224900 Sobic003G330500 Sobic003G330500 Sobic001G458700--Sobic003G330500 Sobic001G458700--Sobic001G283200 Sobic001G458700--Sobic001G502200 Sobic004G081800 Sobic004G081800 Sobic001G458700--Sobic004G081800 Sobic006G101700 Sobic006G101700 Sobic001G085100--Sobic006G101700 Sobic001G261436 Sobic001G261436 Sobic001G085100--Sobic001G261436 Sobic006G148200 Sobic006G148200 Sobic001G085100--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G085100--Sobic007G167900 Sobic001G206900 Sobic001G206900 Sobic001G085100--Sobic001G206900 Sobic001G047400 Sobic001G047400 Sobic001G085100--Sobic001G047400 Sobic004G066200 Sobic004G066200 Sobic001G085100--Sobic004G066200 Sobic001G091300 Sobic001G091300 Sobic001G085100--Sobic001G091300 Sobic003G012200 Sobic003G012200 Sobic001G085100--Sobic003G012200 Sobic007G061400 Sobic007G061400 Sobic005G111900--Sobic007G061400 Sobic001G014800 Sobic001G014800 Sobic005G111900--Sobic001G014800 Sobic006G029000 Sobic006G029000 Sobic005G111900--Sobic006G029000 Sobic006G002201 Sobic006G002201 Sobic005G111900--Sobic006G002201 Sobic005G111900--Sobic004G194900 Sobic005G111900--Sobic003G349300 Sobic005G111900--Sobic010G205300 Sobic001G473800 Sobic001G473800 Sobic005G111900--Sobic001G473800 Sobic009G149500 Sobic009G149500 Sobic005G111900--Sobic009G149500
Octagon: transcription factors


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