Gene annotation
Transcriptome id Sobic.006G044600.2,Sobic.006G044600.3
Synonym Sb06g011300, TIF3H1
Functional annotation eukaryotic translation initiation factor 3 subunit H, putative, expressed
UniProt A0A1Z5RC59 , A0A1Z5RCM7
Pfam PF01398
Panther DB PTHR10410 PTHR10410:SF3
NCBI CDD KOG1560; Translation initiation factor 3, subunit h (eIF-3h)
KEGG Orthology K03247; translation initiation factor 3 subunit H
Gene Ontology GO:0005852; eukaryotic translation initiation factor 3 complex GO:0005737cytoplasm GO:0003743translation initiation factor activity GO:0005515protein binding GO:0005852eukaryotic translation initiation factor 3 complex GO:0005737cytoplasm GO:0003743translation initiation factor activity


Orthologs (automatic annotation)
TAIR AT1G10840 : translation initiation factor 3 subunit H1
RAP-DB (Rice) LOC_Os04g30780.1 : eukaryotic translation initiation factor 3 subunit H, putative, expressed
MaizeGDB (Corn) Zm00025a055846 , Zm00025a055842
Brachypodium KQJ82192 , KQJ82193
Barley HORVU2Hr1G068360.9 , HORVU2Hr1G068360.8 , HORVU2Hr1G068360.7 , HORVU2Hr1G068360.6 , HORVU2Hr1G068360.5 , HORVU2Hr1G068360.4 , HORVU2Hr1G068360.3 , HORVU2Hr1G068360.2 , HORVU2Hr1G068360.1
Wheat TraesCS2A02G279200 , TraesCS2B02G296700 , TraesCS2B02G296700 , TraesCS2B02G296700 , TraesCS2D02G278200 , TraesCS2D02G278200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
2 Sobic.004G194900 expressed protein -
3 Sobic.002G394600 peptidase, T1 family, putative, expressed K02727: 20S proteasome subunit alpha 7
4 Sobic.007G184500 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
5 Sobic.007G166400 mediator of RNA polymerase II transcription subunit 31, putative, expressed K15153: MED31, mediator of RNA polymerase II transcription subunit 31
6 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
7 Sobic.002G077900 eukaryotic translation initiation factor 3 subunit E, putative, expressed K03250: EIF3E, translation initiation factor 3 subunit E
8 Sobic.009G058500 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
9 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
10 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
11 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
12 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
13 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -
14 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
15 Sobic.001G360200 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
16 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
17 Sobic.002G300700 peptidyl-prolyl cis-trans isomerase, putative, expressed -
18 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
19 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
20 Sobic.010G073100 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -


Gene co-expression network
sample Sobic006G044600 Sobic006G044600 Sobic002G341800 Sobic002G341800 Sobic006G044600--Sobic002G341800 Sobic004G194900 Sobic004G194900 Sobic006G044600--Sobic004G194900 Sobic002G394600 Sobic002G394600 Sobic006G044600--Sobic002G394600 Sobic007G184500 Sobic007G184500 Sobic006G044600--Sobic007G184500 Sobic007G166400 Sobic007G166400 Sobic006G044600--Sobic007G166400 Sobic001G458700 Sobic001G458700 Sobic006G044600--Sobic001G458700 Sobic002G077900 Sobic002G077900 Sobic006G044600--Sobic002G077900 Sobic009G058500 Sobic009G058500 Sobic006G044600--Sobic009G058500 Sobic008G055900 Sobic008G055900 Sobic006G044600--Sobic008G055900 Sobic002G341800--Sobic001G458700 Sobic001G404100 Sobic001G404100 Sobic002G341800--Sobic001G404100 Sobic001G481700 Sobic001G481700 Sobic002G341800--Sobic001G481700 Sobic007G176200 Sobic007G176200 Sobic002G341800--Sobic007G176200 Sobic002G341800--Sobic006G044600 Sobic002G341800--Sobic002G394600 Sobic005G105500 Sobic005G105500 Sobic002G341800--Sobic005G105500 Sobic008G137600 Sobic008G137600 Sobic002G341800--Sobic008G137600 Sobic004G081800 Sobic004G081800 Sobic002G341800--Sobic004G081800 Sobic010G205300 Sobic010G205300 Sobic004G194900--Sobic010G205300 Sobic002G281300 Sobic002G281300 Sobic004G194900--Sobic002G281300 Sobic004G194900--Sobic006G044600 Sobic003G349300 Sobic003G349300 Sobic004G194900--Sobic003G349300 Sobic009G225000 Sobic009G225000 Sobic004G194900--Sobic009G225000 Sobic004G310500 Sobic004G310500 Sobic004G194900--Sobic004G310500 Sobic004G194900--Sobic001G458700 Sobic001G085100 Sobic001G085100 Sobic004G194900--Sobic001G085100 Sobic005G111900 Sobic005G111900 Sobic004G194900--Sobic005G111900 Sobic002G394600--Sobic002G341800 Sobic002G394600--Sobic006G044600 Sobic002G014400 Sobic002G014400 Sobic002G394600--Sobic002G014400 Sobic001G251600 Sobic001G251600 Sobic002G394600--Sobic001G251600 Sobic009G190300 Sobic009G190300 Sobic002G394600--Sobic009G190300 Sobic002G394600--Sobic004G194900 Sobic002G394600--Sobic001G404100 Sobic007G177300 Sobic007G177300 Sobic002G394600--Sobic007G177300 Sobic002G394600--Sobic004G310500 Sobic001G360200 Sobic001G360200 Sobic007G184500--Sobic001G360200 Sobic001G033500 Sobic001G033500 Sobic007G184500--Sobic001G033500 Sobic007G077400 Sobic007G077400 Sobic007G184500--Sobic007G077400 Sobic007G184500--Sobic006G044600 Sobic007G184500--Sobic009G058500 Sobic006G278700 Sobic006G278700 Sobic007G184500--Sobic006G278700 Sobic004G353000 Sobic004G353000 Sobic007G184500--Sobic004G353000 Sobic004G178200 Sobic004G178200 Sobic007G184500--Sobic004G178200 Sobic010G073100 Sobic010G073100 Sobic007G184500--Sobic010G073100 Sobic006G101700 Sobic006G101700 Sobic007G166400--Sobic006G101700 Sobic003G264200 Sobic003G264200 Sobic007G166400--Sobic003G264200 Sobic009G222500 Sobic009G222500 Sobic007G166400--Sobic009G222500 Sobic006G049700 Sobic006G049700 Sobic007G166400--Sobic006G049700 Sobic007G167900 Sobic007G167900 Sobic007G166400--Sobic007G167900 Sobic004G066200 Sobic004G066200 Sobic007G166400--Sobic004G066200 Sobic007G166400--Sobic006G044600 Sobic008G153500 Sobic008G153500 Sobic007G166400--Sobic008G153500 Sobic001G114500 Sobic001G114500 Sobic007G166400--Sobic001G114500 Sobic001G458700--Sobic007G176200 Sobic006G252200 Sobic006G252200 Sobic001G458700--Sobic006G252200 Sobic001G010700 Sobic001G010700 Sobic001G458700--Sobic001G010700 Sobic001G458700--Sobic002G341800 Sobic004G224900 Sobic004G224900 Sobic001G458700--Sobic004G224900 Sobic003G330500 Sobic003G330500 Sobic001G458700--Sobic003G330500 Sobic001G283200 Sobic001G283200 Sobic001G458700--Sobic001G283200 Sobic001G502200 Sobic001G502200 Sobic001G458700--Sobic001G502200 Sobic001G458700--Sobic004G081800 Sobic001G168900 Sobic001G168900 Sobic002G077900--Sobic001G168900 Sobic001G226000 Sobic001G226000 Sobic002G077900--Sobic001G226000 Sobic001G370300 Sobic001G370300 Sobic002G077900--Sobic001G370300 Sobic003G420700 Sobic003G420700 Sobic002G077900--Sobic003G420700 Sobic004G307500 Sobic004G307500 Sobic002G077900--Sobic004G307500 Sobic002G077900--Sobic009G058500 Sobic009G258400 Sobic009G258400 Sobic002G077900--Sobic009G258400 Sobic002G077900--Sobic006G044600 Sobic010G193800 Sobic010G193800 Sobic002G077900--Sobic010G193800 Sobic009G058500--Sobic001G360200 Sobic009G058500--Sobic007G184500 Sobic010G018700 Sobic010G018700 Sobic009G058500--Sobic010G018700 Sobic009G058500--Sobic002G077900 Sobic003G439800 Sobic003G439800 Sobic009G058500--Sobic003G439800 Sobic003G074400 Sobic003G074400 Sobic009G058500--Sobic003G074400 Sobic009G058500--Sobic006G278700 Sobic009G058500--Sobic006G044600 Sobic004G346100 Sobic004G346100 Sobic009G058500--Sobic004G346100 Sobic002G020700 Sobic002G020700 Sobic008G055900--Sobic002G020700 Sobic010G223300 Sobic010G223300 Sobic008G055900--Sobic010G223300 Sobic008G103300 Sobic008G103300 Sobic008G055900--Sobic008G103300 Sobic010G020400 Sobic010G020400 Sobic008G055900--Sobic010G020400 Sobic006G136400 Sobic006G136400 Sobic008G055900--Sobic006G136400 Sobic001G447300 Sobic001G447300 Sobic008G055900--Sobic001G447300 Sobic008G085700 Sobic008G085700 Sobic008G055900--Sobic008G085700 Sobic006G056200 Sobic006G056200 Sobic008G055900--Sobic006G056200 Sobic008G129600 Sobic008G129600 Sobic008G055900--Sobic008G129600
Octagon: transcription factors


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