Gene annotation
Transcriptome id Sobic.007G176200.1
Synonym EMB2719, Sb07g024800, HAP15
Functional annotation 26S proteasome non-ATPase regulatory subunit 3, putative, expressed
UniProt C5YH21
Pfam PF01399 PF08375
Panther DB PTHR10758 PTHR10758:SF3
NCBI CDD -
KEGG Orthology K03033; PSMD3, 26S proteasome regulatory subunit N3
Gene Ontology GO:0005515; protein binding GO:0000502proteasome complex


Orthologs (automatic annotation)
TAIR AT1G20200 : PAM domain (PCI/PINT associated module) protein
RAP-DB (Rice) LOC_Os08g43640.1 : 26S proteasome non-ATPase regulatory subunit 3, putative, expressed
MaizeGDB (Corn) Zm00025a034228 , Zm00025a005672
Brachypodium KQJ89396 , KQJ91265 , KQK23163 , KQK23162
Barley HORVU4Hr1G071480.8 , HORVU4Hr1G071480.6 , HORVU4Hr1G071480.7 , HORVU4Hr1G071480.4 , HORVU4Hr1G071480.5 , HORVU4Hr1G071480.2 , HORVU4Hr1G071480.3 , HORVU4Hr1G071480.1
Wheat TraesCS4B02G265700 , TraesCS4B02G265800 , TraesCS4A02G044600 , TraesCS4D02G265700 , TraesCS5D02G340000
Populus -


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cDNA sequences
Sobic.007G176200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
2 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
3 Sobic.006G252200 MEE34, putative, expressed K03038: PSMD7, 26S proteasome regulatory subunit N8
4 Sobic.003G330500 peptidase, T1 family, putative, expressed -
5 Sobic.004G224900 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
6 Sobic.002G428200 26S protease regulatory subunit 4, putative, expressed K03062: PSMC1, 26S proteasome regulatory subunit T2
7 Sobic.004G335000 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
8 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
9 Sobic.009G067000 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
10 Sobic.001G481700 eukaryotic translation initiation factor 3 subunit K, putative, expressed K15028: translation initiation factor 3 subunit K
11 Sobic.006G211800 coatomer subunit epsilon, putative, expressed K17268: coatomer subunit epsilon
12 Sobic.001G502200 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
13 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
14 Sobic.001G109300 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
15 Sobic.007G045600 MSP domain containing protein, expressed -
16 Sobic.007G076300 26S proteasome non-ATPase regulatory subunit 8, putative, expressed K03031: PSMD8, 26S proteasome regulatory subunit N12
17 Sobic.007G142500 EF hand family protein, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
18 Sobic.001G236300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
19 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
20 Sobic.004G081800 Ubiquitin family domain containing protein, expressed K11885: DNA damage-inducible protein 1


Gene co-expression network
sample Sobic007G176200 Sobic007G176200 Sobic001G458700 Sobic001G458700 Sobic007G176200--Sobic001G458700 Sobic001G010700 Sobic001G010700 Sobic007G176200--Sobic001G010700 Sobic006G252200 Sobic006G252200 Sobic007G176200--Sobic006G252200 Sobic003G330500 Sobic003G330500 Sobic007G176200--Sobic003G330500 Sobic004G224900 Sobic004G224900 Sobic007G176200--Sobic004G224900 Sobic002G428200 Sobic002G428200 Sobic007G176200--Sobic002G428200 Sobic004G335000 Sobic004G335000 Sobic007G176200--Sobic004G335000 Sobic002G341800 Sobic002G341800 Sobic007G176200--Sobic002G341800 Sobic009G067000 Sobic009G067000 Sobic007G176200--Sobic009G067000 Sobic001G458700--Sobic007G176200 Sobic001G458700--Sobic006G252200 Sobic001G458700--Sobic001G010700 Sobic001G458700--Sobic002G341800 Sobic001G458700--Sobic004G224900 Sobic001G458700--Sobic003G330500 Sobic001G283200 Sobic001G283200 Sobic001G458700--Sobic001G283200 Sobic001G502200 Sobic001G502200 Sobic001G458700--Sobic001G502200 Sobic004G081800 Sobic004G081800 Sobic001G458700--Sobic004G081800 Sobic001G010700--Sobic007G176200 Sobic001G010700--Sobic006G252200 Sobic001G010700--Sobic001G458700 Sobic001G010700--Sobic003G330500 Sobic001G010700--Sobic004G335000 Sobic001G010700--Sobic002G428200 Sobic001G010700--Sobic004G224900 Sobic003G043400 Sobic003G043400 Sobic001G010700--Sobic003G043400 Sobic002G423800 Sobic002G423800 Sobic001G010700--Sobic002G423800 Sobic006G252200--Sobic007G176200 Sobic006G252200--Sobic001G458700 Sobic006G252200--Sobic004G224900 Sobic006G252200--Sobic001G010700 Sobic006G252200--Sobic003G330500 Sobic006G252200--Sobic002G428200 Sobic004G138800 Sobic004G138800 Sobic006G252200--Sobic004G138800 Sobic006G252200--Sobic001G283200 Sobic001G096100 Sobic001G096100 Sobic006G252200--Sobic001G096100 Sobic003G330500--Sobic004G224900 Sobic003G330500--Sobic007G176200 Sobic007G076300 Sobic007G076300 Sobic003G330500--Sobic007G076300 Sobic003G330500--Sobic006G252200 Sobic003G330500--Sobic001G458700 Sobic003G330500--Sobic001G010700 Sobic003G330500--Sobic001G502200 Sobic003G330500--Sobic004G138800 Sobic003G330500--Sobic001G096100 Sobic004G224900--Sobic003G330500 Sobic004G224900--Sobic006G252200 Sobic004G224900--Sobic007G176200 Sobic004G224900--Sobic004G138800 Sobic004G224900--Sobic007G076300 Sobic001G481700 Sobic001G481700 Sobic004G224900--Sobic001G481700 Sobic004G224900--Sobic001G502200 Sobic004G224900--Sobic001G458700 Sobic001G236300 Sobic001G236300 Sobic004G224900--Sobic001G236300 Sobic002G428200--Sobic004G335000 Sobic002G428200--Sobic007G176200 Sobic006G211800 Sobic006G211800 Sobic002G428200--Sobic006G211800 Sobic002G428200--Sobic004G224900 Sobic002G428200--Sobic006G252200 Sobic002G428200--Sobic001G502200 Sobic008G137600 Sobic008G137600 Sobic002G428200--Sobic008G137600 Sobic002G428200--Sobic001G010700 Sobic003G104700 Sobic003G104700 Sobic002G428200--Sobic003G104700 Sobic004G335000--Sobic002G428200 Sobic004G335000--Sobic007G176200 Sobic004G335000--Sobic001G010700 Sobic002G257400 Sobic002G257400 Sobic004G335000--Sobic002G257400 Sobic004G335000--Sobic006G252200 Sobic004G335000--Sobic001G236300 Sobic001G461900 Sobic001G461900 Sobic004G335000--Sobic001G461900 Sobic001G058100 Sobic001G058100 Sobic004G335000--Sobic001G058100 Sobic007G045600 Sobic007G045600 Sobic004G335000--Sobic007G045600 Sobic002G341800--Sobic001G458700 Sobic001G404100 Sobic001G404100 Sobic002G341800--Sobic001G404100 Sobic002G341800--Sobic001G481700 Sobic002G341800--Sobic007G176200 Sobic006G044600 Sobic006G044600 Sobic002G341800--Sobic006G044600 Sobic002G394600 Sobic002G394600 Sobic002G341800--Sobic002G394600 Sobic005G105500 Sobic005G105500 Sobic002G341800--Sobic005G105500 Sobic002G341800--Sobic008G137600 Sobic002G341800--Sobic004G081800 Sobic009G067000--Sobic007G176200 Sobic009G067000--Sobic006G252200 Sobic009G067000--Sobic001G458700 Sobic001G007600 Sobic001G007600 Sobic009G067000--Sobic001G007600 Sobic009G067000--Sobic002G428200 Sobic009G067000--Sobic001G010700 Sobic007G114200 Sobic007G114200 Sobic009G067000--Sobic007G114200 Sobic009G067000--Sobic004G224900 Sobic009G067000--Sobic001G283200
Octagon: transcription factors


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