Gene annotation
Transcriptome id Sobic.001G109300.1
Synonym ATCAP1, CAP1, Sb01g009760
Functional annotation adenylyl cyclase-associated protein, putative, expressed
UniProt A0A1B6QID9
Pfam PF08603 PF01213
Panther DB PTHR10652
NCBI CDD KOG2675; Adenylate cyclase-associated protein (CAP/Srv2p)
KEGG Orthology K17261; CAP1_2, adenylyl cyclase-associated protein
Gene Ontology GO:0007010; cytoskeleton organization GO:0003779actin binding


Orthologs (automatic annotation)
TAIR AT4G34490 : cyclase associated protein 1
RAP-DB (Rice) LOC_Os03g51250.1 : adenylyl cyclase-associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a016917 , Zm00025a007946
Brachypodium KQK13468
Barley HORVU4Hr1G008940.3 , HORVU4Hr1G008940.2 , HORVU4Hr1G008940.1 , HORVU4Hr1G008940.4
Wheat TraesCS4A02G260800 , TraesCS4B02G053800 , TraesCS4D02G053800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
2 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
3 Sobic.006G252200 MEE34, putative, expressed K03038: PSMD7, 26S proteasome regulatory subunit N8
4 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
5 Sobic.003G428200 MEMO1, putative, expressed K06990: MEMO1 family protein
6 Sobic.003G330500 peptidase, T1 family, putative, expressed -
7 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
8 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
9 Sobic.009G067000 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
10 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
11 Sobic.003G009300 methyltransferase domain containing protein, putative, expressed K06127: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
12 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
13 Sobic.001G220900 adaptin ear-binding coat-associated protein 2, putative, expressed -
14 Sobic.002G187300 calmodulin-binding protein, putative, expressed -
15 Sobic.001G007600 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
16 Sobic.001G444300 expressed protein -
17 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
18 Sobic.003G348800 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
19 Sobic.001G236300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
20 Sobic.004G335000 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5


Gene co-expression network
sample Sobic001G109300 Sobic001G109300 Sobic007G176200 Sobic007G176200 Sobic001G109300--Sobic007G176200 Sobic009G139800 Sobic009G139800 Sobic001G109300--Sobic009G139800 Sobic006G252200 Sobic006G252200 Sobic001G109300--Sobic006G252200 Sobic001G010700 Sobic001G010700 Sobic001G109300--Sobic001G010700 Sobic003G428200 Sobic003G428200 Sobic001G109300--Sobic003G428200 Sobic003G330500 Sobic003G330500 Sobic001G109300--Sobic003G330500 Sobic001G281900 Sobic001G281900 Sobic001G109300--Sobic001G281900 Sobic001G458700 Sobic001G458700 Sobic001G109300--Sobic001G458700 Sobic009G067000 Sobic009G067000 Sobic001G109300--Sobic009G067000 Sobic007G176200--Sobic001G458700 Sobic007G176200--Sobic001G010700 Sobic007G176200--Sobic006G252200 Sobic007G176200--Sobic003G330500 Sobic004G224900 Sobic004G224900 Sobic007G176200--Sobic004G224900 Sobic002G428200 Sobic002G428200 Sobic007G176200--Sobic002G428200 Sobic004G335000 Sobic004G335000 Sobic007G176200--Sobic004G335000 Sobic002G341800 Sobic002G341800 Sobic007G176200--Sobic002G341800 Sobic007G176200--Sobic009G067000 Sobic006G114400 Sobic006G114400 Sobic009G139800--Sobic006G114400 Sobic009G139800--Sobic001G109300 Sobic008G113600 Sobic008G113600 Sobic009G139800--Sobic008G113600 Sobic009G139800--Sobic003G428200 Sobic002G141700 Sobic002G141700 Sobic009G139800--Sobic002G141700 Sobic001G058100 Sobic001G058100 Sobic009G139800--Sobic001G058100 Sobic003G087000 Sobic003G087000 Sobic009G139800--Sobic003G087000 Sobic003G280300 Sobic003G280300 Sobic009G139800--Sobic003G280300 Sobic009G139800--Sobic001G010700 Sobic006G252200--Sobic007G176200 Sobic006G252200--Sobic001G458700 Sobic006G252200--Sobic004G224900 Sobic006G252200--Sobic001G010700 Sobic006G252200--Sobic003G330500 Sobic006G252200--Sobic002G428200 Sobic004G138800 Sobic004G138800 Sobic006G252200--Sobic004G138800 Sobic001G283200 Sobic001G283200 Sobic006G252200--Sobic001G283200 Sobic001G096100 Sobic001G096100 Sobic006G252200--Sobic001G096100 Sobic001G010700--Sobic007G176200 Sobic001G010700--Sobic006G252200 Sobic001G010700--Sobic001G458700 Sobic001G010700--Sobic003G330500 Sobic001G010700--Sobic004G335000 Sobic001G010700--Sobic002G428200 Sobic001G010700--Sobic004G224900 Sobic003G043400 Sobic003G043400 Sobic001G010700--Sobic003G043400 Sobic002G423800 Sobic002G423800 Sobic001G010700--Sobic002G423800 Sobic009G117200 Sobic009G117200 Sobic003G428200--Sobic009G117200 Sobic004G204800 Sobic004G204800 Sobic003G428200--Sobic004G204800 Sobic003G428200--Sobic001G010700 Sobic003G428200--Sobic009G139800 Sobic007G076300 Sobic007G076300 Sobic003G428200--Sobic007G076300 Sobic003G428200--Sobic001G109300 Sobic009G093200 Sobic009G093200 Sobic003G428200--Sobic009G093200 Sobic002G257400 Sobic002G257400 Sobic003G428200--Sobic002G257400 Sobic003G428200--Sobic007G176200 Sobic003G330500--Sobic004G224900 Sobic003G330500--Sobic007G176200 Sobic003G330500--Sobic007G076300 Sobic003G330500--Sobic006G252200 Sobic003G330500--Sobic001G458700 Sobic003G330500--Sobic001G010700 Sobic001G502200 Sobic001G502200 Sobic003G330500--Sobic001G502200 Sobic003G330500--Sobic004G138800 Sobic003G330500--Sobic001G096100 Sobic001G281900--Sobic003G330500 Sobic005G105500 Sobic005G105500 Sobic001G281900--Sobic005G105500 Sobic008G150300 Sobic008G150300 Sobic001G281900--Sobic008G150300 Sobic001G281900--Sobic006G252200 Sobic001G196100 Sobic001G196100 Sobic001G281900--Sobic001G196100 Sobic001G281900--Sobic001G458700 Sobic001G281900--Sobic007G176200 Sobic001G338400 Sobic001G338400 Sobic001G281900--Sobic001G338400 Sobic001G281900--Sobic001G096100 Sobic001G458700--Sobic007G176200 Sobic001G458700--Sobic006G252200 Sobic001G458700--Sobic001G010700 Sobic001G458700--Sobic002G341800 Sobic001G458700--Sobic004G224900 Sobic001G458700--Sobic003G330500 Sobic001G458700--Sobic001G283200 Sobic001G458700--Sobic001G502200 Sobic004G081800 Sobic004G081800 Sobic001G458700--Sobic004G081800 Sobic009G067000--Sobic007G176200 Sobic009G067000--Sobic006G252200 Sobic009G067000--Sobic001G458700 Sobic001G007600 Sobic001G007600 Sobic009G067000--Sobic001G007600 Sobic009G067000--Sobic002G428200 Sobic009G067000--Sobic001G010700 Sobic007G114200 Sobic007G114200 Sobic009G067000--Sobic007G114200 Sobic009G067000--Sobic004G224900 Sobic009G067000--Sobic001G283200
Octagon: transcription factors


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