Gene annotation
Transcriptome id Sobic.001G220900.1,Sobic.001G220900.2
Synonym ATNAP4, NAP4, Sb01g019420
Functional annotation adaptin ear-binding coat-associated protein 2, putative, expressed
UniProt C5WYH0
Pfam PF07933
Panther DB PTHR12847 PTHR12847:SF3
NCBI CDD KOG2500; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006897endocytosis


Orthologs (automatic annotation)
TAIR AT1G03900 : non-intrinsic ABC protein 4
RAP-DB (Rice) LOC_Os10g33630.2,LOC_Os10g33630.1 : adaptin ear-binding coat-associated protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a017643
Brachypodium KQJ97078
Barley HORVU1Hr1G040850.48 , HORVU1Hr1G040850.43 , HORVU1Hr1G040850.44 , HORVU1Hr1G040850.9 , HORVU1Hr1G040850.12 , HORVU1Hr1G040850.10 , HORVU1Hr1G040850.18 , HORVU1Hr1G040850.50 , HORVU1Hr1G040850.51
Wheat TraesCS1D02G151800 , TraesCS1A02G153300 , TraesCS1B02G171600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G490500 conserved oligomeric Golgi complex component 4, related, putative, expressed -
2 Sobic.002G141700 unc-50, putative, expressed -
3 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
4 Sobic.008G151500 EXS family protein, putative, expressed -
5 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
6 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
7 Sobic.003G134800 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
8 Sobic.003G009300 methyltransferase domain containing protein, putative, expressed K06127: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
9 Sobic.001G077900 SSA2 - 2S albumin seed storage family protein precursor, putative, expressed -
10 Sobic.001G444300 expressed protein -
11 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
12 Sobic.001G542900 uncharacterized Cys-rich domain containing protein, putative, expressed -
13 Sobic.003G161600 dephospho-CoA kinase, putative, expressed K00859: dephospho-CoA kinase
14 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
15 Sobic.002G087000 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
16 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
17 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
18 Sobic.003G261800 expressed protein -
19 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
20 Sobic.001G109300 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein


Gene co-expression network
sample Sobic001G220900 Sobic001G220900 Sobic001G490500 Sobic001G490500 Sobic001G220900--Sobic001G490500 Sobic002G141700 Sobic002G141700 Sobic001G220900--Sobic002G141700 Sobic001G281900 Sobic001G281900 Sobic001G220900--Sobic001G281900 Sobic008G151500 Sobic008G151500 Sobic001G220900--Sobic008G151500 Sobic001G145500 Sobic001G145500 Sobic001G220900--Sobic001G145500 Sobic001G443200 Sobic001G443200 Sobic001G220900--Sobic001G443200 Sobic003G134800 Sobic003G134800 Sobic001G220900--Sobic003G134800 Sobic003G009300 Sobic003G009300 Sobic001G220900--Sobic003G009300 Sobic001G077900 Sobic001G077900 Sobic001G220900--Sobic001G077900 Sobic001G161700 Sobic001G161700 Sobic001G490500--Sobic001G161700 Sobic001G490500--Sobic001G220900 Sobic001G117800 Sobic001G117800 Sobic001G490500--Sobic001G117800 Sobic002G070600 Sobic002G070600 Sobic001G490500--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic001G490500--Sobic008G072200 Sobic001G490500--Sobic001G077900 Sobic001G522000 Sobic001G522000 Sobic001G490500--Sobic001G522000 Sobic001G338400 Sobic001G338400 Sobic001G490500--Sobic001G338400 Sobic003G029600 Sobic003G029600 Sobic001G490500--Sobic003G029600 Sobic003G261800 Sobic003G261800 Sobic002G141700--Sobic003G261800 Sobic002G141700--Sobic001G443200 Sobic002G141700--Sobic001G077900 Sobic002G087000 Sobic002G087000 Sobic002G141700--Sobic002G087000 Sobic002G141700--Sobic001G220900 Sobic007G173700 Sobic007G173700 Sobic002G141700--Sobic007G173700 Sobic002G029300 Sobic002G029300 Sobic002G141700--Sobic002G029300 Sobic002G141700--Sobic003G134800 Sobic001G542900 Sobic001G542900 Sobic002G141700--Sobic001G542900 Sobic003G330500 Sobic003G330500 Sobic001G281900--Sobic003G330500 Sobic005G105500 Sobic005G105500 Sobic001G281900--Sobic005G105500 Sobic008G150300 Sobic008G150300 Sobic001G281900--Sobic008G150300 Sobic006G252200 Sobic006G252200 Sobic001G281900--Sobic006G252200 Sobic001G196100 Sobic001G196100 Sobic001G281900--Sobic001G196100 Sobic001G458700 Sobic001G458700 Sobic001G281900--Sobic001G458700 Sobic007G176200 Sobic007G176200 Sobic001G281900--Sobic007G176200 Sobic001G281900--Sobic001G338400 Sobic001G096100 Sobic001G096100 Sobic001G281900--Sobic001G096100 Sobic008G151500--Sobic001G443200 Sobic008G151500--Sobic001G220900 SobicK043400 SobicK043400 Sobic008G151500--SobicK043400 Sobic006G259401 Sobic006G259401 Sobic008G151500--Sobic006G259401 Sobic004G000100 Sobic004G000100 Sobic008G151500--Sobic004G000100 Sobic001G458800 Sobic001G458800 Sobic008G151500--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic008G151500--Sobic003G034900 Sobic002G070300 Sobic002G070300 Sobic008G151500--Sobic002G070300 Sobic002G295700 Sobic002G295700 Sobic008G151500--Sobic002G295700 Sobic001G444300 Sobic001G444300 Sobic001G145500--Sobic001G444300 Sobic001G145500--Sobic005G105500 Sobic001G145500--Sobic001G338400 Sobic001G145500--Sobic001G281900 Sobic001G145500--Sobic007G176200 Sobic004G010900 Sobic004G010900 Sobic001G145500--Sobic004G010900 Sobic001G145500--Sobic006G252200 Sobic001G145500--Sobic003G330500 Sobic001G145500--Sobic002G029300 Sobic008G102600 Sobic008G102600 Sobic001G443200--Sobic008G102600 Sobic001G443200--Sobic004G000100 Sobic004G039400 Sobic004G039400 Sobic001G443200--Sobic004G039400 Sobic001G112400 Sobic001G112400 Sobic001G443200--Sobic001G112400 Sobic004G344800 Sobic004G344800 Sobic001G443200--Sobic004G344800 Sobic001G443200--Sobic002G141700 Sobic010G040900 Sobic010G040900 Sobic001G443200--Sobic010G040900 Sobic001G073600 Sobic001G073600 Sobic001G443200--Sobic001G073600 Sobic002G262200 Sobic002G262200 Sobic001G443200--Sobic002G262200 Sobic003G134800--Sobic002G070600 Sobic003G134800--Sobic008G072200 Sobic003G134800--Sobic002G141700 Sobic010G178600 Sobic010G178600 Sobic003G134800--Sobic010G178600 Sobic003G134800--Sobic001G117800 Sobic002G423500 Sobic002G423500 Sobic003G134800--Sobic002G423500 Sobic003G134800--Sobic001G220900 Sobic001G151600 Sobic001G151600 Sobic003G134800--Sobic001G151600 Sobic003G143700 Sobic003G143700 Sobic003G134800--Sobic003G143700 Sobic006G114400 Sobic006G114400 Sobic003G009300--Sobic006G114400 Sobic003G009300--Sobic001G077900 Sobic006G232000 Sobic006G232000 Sobic003G009300--Sobic006G232000 Sobic003G009300--Sobic001G220900 Sobic003G009300--Sobic001G443200 Sobic003G009300--Sobic007G176200 Sobic001G109300 Sobic001G109300 Sobic003G009300--Sobic001G109300 Sobic003G009300--Sobic002G141700 Sobic003G009300--Sobic001G444300 Sobic001G077900--Sobic001G443200 Sobic001G077900--Sobic002G141700 Sobic003G196200 Sobic003G196200 Sobic001G077900--Sobic003G196200 Sobic001G077900--Sobic001G161700 Sobic001G077900--Sobic003G009300 Sobic001G077900--Sobic001G490500 Sobic006G029000 Sobic006G029000 Sobic001G077900--Sobic006G029000 Sobic001G077900--Sobic004G000100 Sobic001G077900--Sobic006G232000
Octagon: transcription factors


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