Gene annotation
Transcriptome id Sobic.002G029300.1
Synonym Sb02g002610
Functional annotation pleckstrin homology domain-containing protein, putative, expressed
UniProt A0A1B6Q8Y1
Pfam PF00169
Panther DB PTHR24356 PTHR24356:SF215
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30880 : Pleckstrin homology (PH) domain-containing protein
RAP-DB (Rice) LOC_Os07g04550.1 : pleckstrin homology domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a016185 , Zm00025a044983
Brachypodium KQK20997 , KQK20996 , KQK20998
Barley HORVU2Hr1G060900.22 , HORVU2Hr1G060900.23 , HORVU2Hr1G060900.20 , HORVU2Hr1G060900.21 , HORVU2Hr1G060900.26 , HORVU2Hr1G060900.27 , HORVU2Hr1G060900.24 , HORVU2Hr1G060900.25 , HORVU2Hr1G060900.28 , HORVU2Hr1G060900.9 , HORVU2Hr1G060900.8 , HORVU2Hr1G060900.3 , HORVU2Hr1G060900.2 , HORVU2Hr1G060900.1 , HORVU2Hr1G060900.7 , HORVU2Hr1G060900.6 , HORVU2Hr1G060900.5 , HORVU2Hr1G060900.4 , HORVU2Hr1G060900.19 , HORVU2Hr1G060900.18 , HORVU2Hr1G060900.13 , HORVU2Hr1G060900.12 , HORVU2Hr1G060900.11 , HORVU2Hr1G060900.10 , HORVU2Hr1G060900.17 , HORVU2Hr1G060900.16 , HORVU2Hr1G060900.15 , HORVU2Hr1G060900.14
Wheat TraesCS2B02G267300 , TraesCS2B02G267300 , TraesCS2B02G267300 , TraesCS2B02G267300 , TraesCS2A02G254800 , TraesCS2A02G254800 , TraesCS2A02G254800 , TraesCS2D02G255300 , TraesCS2D02G255300 , TraesCS2D02G255300 , TraesCS2D02G255300
Populus -


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cDNA sequences
Sobic.002G029300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G023100 ACBP4, putative, expressed -
2 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
3 Sobic.004G031800 expressed protein -
4 Sobic.008G072200 coatomer subunit delta, putative, expressed -
5 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
6 Sobic.009G226400 dynamin family protein, putative, expressed -
7 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
8 Sobic.002G141700 unc-50, putative, expressed -
9 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
10 Sobic.004G000100 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
11 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
12 Sobic.009G207200 ER lumen protein retaining receptor, putative, expressed K10949: ER lumen protein retaining receptor
13 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
14 Sobic.008G145100 glycosyl transferase, group 1 domain containing protein, expressed K03844: alpha-1,2-mannosyltransferase
15 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
16 Sobic.007G120800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
17 Sobic.004G010900 OsFBK2 - F-box domain and kelch repeat containing protein, expressed -
18 Sobic.001G061200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
19 Sobic.005G184200 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
20 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase


Gene co-expression network
sample Sobic002G029300 Sobic002G029300 Sobic001G023100 Sobic001G023100 Sobic002G029300--Sobic001G023100 Sobic007G173700 Sobic007G173700 Sobic002G029300--Sobic007G173700 Sobic004G031800 Sobic004G031800 Sobic002G029300--Sobic004G031800 Sobic008G072200 Sobic008G072200 Sobic002G029300--Sobic008G072200 Sobic001G010700 Sobic001G010700 Sobic002G029300--Sobic001G010700 Sobic009G226400 Sobic009G226400 Sobic002G029300--Sobic009G226400 Sobic001G161700 Sobic001G161700 Sobic002G029300--Sobic001G161700 Sobic002G141700 Sobic002G141700 Sobic002G029300--Sobic002G141700 Sobic006G056200 Sobic006G056200 Sobic002G029300--Sobic006G056200 Sobic001G023100--Sobic002G029300 Sobic001G023100--Sobic007G173700 Sobic001G023100--Sobic009G226400 Sobic008G055900 Sobic008G055900 Sobic001G023100--Sobic008G055900 Sobic001G023100--Sobic001G161700 Sobic001G023100--Sobic008G072200 Sobic001G193100 Sobic001G193100 Sobic001G023100--Sobic001G193100 Sobic003G270600 Sobic003G270600 Sobic001G023100--Sobic003G270600 Sobic008G085700 Sobic008G085700 Sobic001G023100--Sobic008G085700 Sobic007G173700--Sobic002G029300 Sobic004G000100 Sobic004G000100 Sobic007G173700--Sobic004G000100 Sobic007G173700--Sobic001G023100 Sobic007G173700--Sobic001G193100 Sobic007G173700--Sobic001G161700 Sobic001G061200 Sobic001G061200 Sobic007G173700--Sobic001G061200 Sobic007G173700--Sobic002G141700 Sobic001G049400 Sobic001G049400 Sobic007G173700--Sobic001G049400 Sobic003G394200 Sobic003G394200 Sobic007G173700--Sobic003G394200 Sobic004G031800--Sobic002G029300 Sobic001G035400 Sobic001G035400 Sobic004G031800--Sobic001G035400 Sobic001G116000 Sobic001G116000 Sobic004G031800--Sobic001G116000 Sobic010G105600 Sobic010G105600 Sobic004G031800--Sobic010G105600 Sobic009G207200 Sobic009G207200 Sobic004G031800--Sobic009G207200 Sobic001G013200 Sobic001G013200 Sobic004G031800--Sobic001G013200 Sobic004G031800--Sobic001G010700 Sobic001G196100 Sobic001G196100 Sobic004G031800--Sobic001G196100 Sobic006G222400 Sobic006G222400 Sobic004G031800--Sobic006G222400 Sobic002G070600 Sobic002G070600 Sobic008G072200--Sobic002G070600 Sobic008G072200--Sobic001G161700 Sobic004G336300 Sobic004G336300 Sobic008G072200--Sobic004G336300 Sobic001G115700 Sobic001G115700 Sobic008G072200--Sobic001G115700 Sobic001G117800 Sobic001G117800 Sobic008G072200--Sobic001G117800 Sobic008G072200--Sobic002G029300 Sobic001G490500 Sobic001G490500 Sobic008G072200--Sobic001G490500 Sobic003G134800 Sobic003G134800 Sobic008G072200--Sobic003G134800 Sobic008G072200--Sobic008G085700 Sobic007G176200 Sobic007G176200 Sobic001G010700--Sobic007G176200 Sobic006G252200 Sobic006G252200 Sobic001G010700--Sobic006G252200 Sobic001G458700 Sobic001G458700 Sobic001G010700--Sobic001G458700 Sobic003G330500 Sobic003G330500 Sobic001G010700--Sobic003G330500 Sobic004G335000 Sobic004G335000 Sobic001G010700--Sobic004G335000 Sobic002G428200 Sobic002G428200 Sobic001G010700--Sobic002G428200 Sobic004G224900 Sobic004G224900 Sobic001G010700--Sobic004G224900 Sobic003G043400 Sobic003G043400 Sobic001G010700--Sobic003G043400 Sobic002G423800 Sobic002G423800 Sobic001G010700--Sobic002G423800 Sobic009G226400--Sobic001G023100 Sobic009G226400--Sobic003G270600 SobicK004100 SobicK004100 Sobic009G226400--SobicK004100 Sobic001G369000 Sobic001G369000 Sobic009G226400--Sobic001G369000 Sobic009G226400--Sobic002G029300 Sobic001G335900 Sobic001G335900 Sobic009G226400--Sobic001G335900 Sobic009G226400--Sobic006G056200 Sobic004G039600 Sobic004G039600 Sobic009G226400--Sobic004G039600 Sobic001G420800 Sobic001G420800 Sobic009G226400--Sobic001G420800 Sobic001G161700--Sobic002G070600 Sobic001G161700--Sobic008G072200 Sobic001G161700--Sobic001G490500 Sobic001G012900 Sobic001G012900 Sobic001G161700--Sobic001G012900 Sobic001G161700--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic001G161700--Sobic003G346400 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic001G161700--Sobic008G085700 Sobic003G261800 Sobic003G261800 Sobic002G141700--Sobic003G261800 Sobic001G443200 Sobic001G443200 Sobic002G141700--Sobic001G443200 Sobic001G077900 Sobic001G077900 Sobic002G141700--Sobic001G077900 Sobic002G087000 Sobic002G087000 Sobic002G141700--Sobic002G087000 Sobic001G220900 Sobic001G220900 Sobic002G141700--Sobic001G220900 Sobic002G141700--Sobic007G173700 Sobic002G141700--Sobic002G029300 Sobic002G141700--Sobic003G134800 Sobic001G542900 Sobic001G542900 Sobic002G141700--Sobic001G542900 Sobic006G056200--Sobic004G039600 Sobic006G056200--Sobic008G055900 Sobic008G129600 Sobic008G129600 Sobic006G056200--Sobic008G129600 Sobic003G099300 Sobic003G099300 Sobic006G056200--Sobic003G099300 Sobic006G056200--Sobic009G226400 Sobic008G103300 Sobic008G103300 Sobic006G056200--Sobic008G103300 Sobic006G056200--Sobic001G369000 Sobic006G056200--SobicK004100 Sobic006G056200--Sobic002G029300
Octagon: transcription factors


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