Gene annotation
Transcriptome id Sobic.007G120800.1,Sobic.007G120800.2
Synonym APM1, ATAPM1, Sb07g019810
Functional annotation puromycin-sensitive aminopeptidase, putative, expressed
UniProt A0A1B6PHL2 , A0A1B6PHE0
Pfam PF11838 PF01433
Panther DB PTHR11533 PTHR11533:SF183
NCBI CDD -
KEGG Orthology K08776; puromycin-sensitive aminopeptidase
Gene Ontology GO:0008270; zinc ion binding GO:0008237metallopeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT4G33090 : aminopeptidase M1
RAP-DB (Rice) LOC_Os08g30810.1 : puromycin-sensitive aminopeptidase, putative, expressed
MaizeGDB (Corn) Zm00025a006037 , Zm00025a046663 , Zm00025a006031 , Zm00025a006034
Brachypodium KQJ89934 , KQJ98189
Barley HORVU5Hr1G057330.19 , HORVU5Hr1G057330.18 , HORVU5Hr1G057330.10 , HORVU5Hr1G057330.13 , HORVU5Hr1G057330.12 , HORVU5Hr1G057330.15 , HORVU5Hr1G057330.14 , HORVU5Hr1G057330.17 , HORVU4Hr1G003100.4 , HORVU4Hr1G003100.2 , HORVU4Hr1G003100.3 , HORVU4Hr1G003100.6 , HORVU4Hr1G003100.7 , HORVU4Hr1G003100.5 , HORVU5Hr1G057330.9 , HORVU5Hr1G057330.8 , HORVU4Hr1G003100.1 , HORVU5Hr1G057330.5 , HORVU5Hr1G057330.4 , HORVU5Hr1G057330.7 , HORVU5Hr1G057330.1 , HORVU5Hr1G057330.3 , HORVU5Hr1G057330.2 , HORVU4Hr1G003100.8 , HORVU4Hr1G003100.9 , HORVU5Hr1G057330.24 , HORVU5Hr1G057330.20 , HORVU5Hr1G057330.21 , HORVU5Hr1G057330.22 , HORVU5Hr1G057330.23 , HORVU4Hr1G003100.10 , HORVU4Hr1G003100.11 , HORVU4Hr1G003100.12
Wheat TraesCS5D02G196600 , TraesCS4D02G017700 , TraesCS4D02G017700 , TraesCS4B02G020000 , TraesCS5A02G194300 , TraesCS4A02G294100 , TraesCS4A02G294100 , TraesCS4A02G294100 , TraesCS5D02G196500 , TraesCS5D02G196500 , TraesCS5A02G194200 , TraesCS4B02G020000 , TraesCS4B02G020000 , TraesCS4B02G020000 , TraesCS5B02G189600 , TraesCS5A02G194100 , TraesCS5A02G194100 , TraesCS5A02G194100 , TraesCS5B02G189500
Populus -


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cDNA sequences
Sobic.007G120800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G408800 protein kinase family protein, putative, expressed K08819: cyclin-dependent kinase 12/13
2 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
3 Sobic.002G194800 expressed protein -
4 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
5 Sobic.008G156300 kinase, pfkB family, putative, expressed K00868: pdxK, pyridoxine kinase
6 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
7 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
8 Sobic.006G259401 - K06130: lysophospholipase II
9 Sobic.007G065500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
10 Sobic.009G105900 amino acid permease family protein, putative, expressed K14427: SLC12A4_6, solute carrier family 12 (potassium/chloride transporter), member 4/6
11 Sobic.008G072200 coatomer subunit delta, putative, expressed -
12 Sobic.006G203100 expressed protein -
13 Sobic.001G023100 ACBP4, putative, expressed -
14 Sobic.003G236800 -(PubMedID : 26976818)@bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
15 Sobic.003G169900 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
16 Sobic.007G208000 geranylgeranyl transferase type-2 subunit beta, putative, expressed K05956: geranylgeranyl transferase type-2 subunit beta
17 Sobic.008G150300 Lg106, putative, expressed -
18 Sobic.009G118900 expressed protein -
19 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
20 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase


Gene co-expression network
sample Sobic007G120800 Sobic007G120800 Sobic002G408800 Sobic002G408800 Sobic007G120800--Sobic002G408800 Sobic002G029300 Sobic002G029300 Sobic007G120800--Sobic002G029300 Sobic002G194800 Sobic002G194800 Sobic007G120800--Sobic002G194800 Sobic006G056200 Sobic006G056200 Sobic007G120800--Sobic006G056200 Sobic008G156300 Sobic008G156300 Sobic007G120800--Sobic008G156300 Sobic007G173700 Sobic007G173700 Sobic007G120800--Sobic007G173700 Sobic001G161700 Sobic001G161700 Sobic007G120800--Sobic001G161700 Sobic006G259401 Sobic006G259401 Sobic007G120800--Sobic006G259401 Sobic007G065500 Sobic007G065500 Sobic007G120800--Sobic007G065500 Sobic002G408800--Sobic007G120800 Sobic003G029600 Sobic003G029600 Sobic002G408800--Sobic003G029600 Sobic002G408800--Sobic002G029300 Sobic009G049400 Sobic009G049400 Sobic002G408800--Sobic009G049400 Sobic005G074100 Sobic005G074100 Sobic002G408800--Sobic005G074100 Sobic001G322000 Sobic001G322000 Sobic002G408800--Sobic001G322000 Sobic002G408800--Sobic006G056200 Sobic009G231700 Sobic009G231700 Sobic002G408800--Sobic009G231700 Sobic010G216000 Sobic010G216000 Sobic002G408800--Sobic010G216000 Sobic001G023100 Sobic001G023100 Sobic002G029300--Sobic001G023100 Sobic002G029300--Sobic007G173700 Sobic004G031800 Sobic004G031800 Sobic002G029300--Sobic004G031800 Sobic008G072200 Sobic008G072200 Sobic002G029300--Sobic008G072200 Sobic001G010700 Sobic001G010700 Sobic002G029300--Sobic001G010700 Sobic009G226400 Sobic009G226400 Sobic002G029300--Sobic009G226400 Sobic002G029300--Sobic001G161700 Sobic002G141700 Sobic002G141700 Sobic002G029300--Sobic002G141700 Sobic002G029300--Sobic006G056200 Sobic002G194800--Sobic007G120800 Sobic002G194800--Sobic001G010700 Sobic003G428200 Sobic003G428200 Sobic002G194800--Sobic003G428200 Sobic009G105900 Sobic009G105900 Sobic002G194800--Sobic009G105900 Sobic002G194800--Sobic002G029300 Sobic002G194800--Sobic007G065500 Sobic009G139800 Sobic009G139800 Sobic002G194800--Sobic009G139800 Sobic001G432300 Sobic001G432300 Sobic002G194800--Sobic001G432300 Sobic003G092700 Sobic003G092700 Sobic002G194800--Sobic003G092700 Sobic004G039600 Sobic004G039600 Sobic006G056200--Sobic004G039600 Sobic008G055900 Sobic008G055900 Sobic006G056200--Sobic008G055900 Sobic008G129600 Sobic008G129600 Sobic006G056200--Sobic008G129600 Sobic003G099300 Sobic003G099300 Sobic006G056200--Sobic003G099300 Sobic006G056200--Sobic009G226400 Sobic008G103300 Sobic008G103300 Sobic006G056200--Sobic008G103300 Sobic001G369000 Sobic001G369000 Sobic006G056200--Sobic001G369000 SobicK004100 SobicK004100 Sobic006G056200--SobicK004100 Sobic006G056200--Sobic002G029300 Sobic008G156300--Sobic007G120800 Sobic006G203100 Sobic006G203100 Sobic008G156300--Sobic006G203100 Sobic008G156300--Sobic001G432300 Sobic010G274500 Sobic010G274500 Sobic008G156300--Sobic010G274500 Sobic005G229166 Sobic005G229166 Sobic008G156300--Sobic005G229166 Sobic010G050200 Sobic010G050200 Sobic008G156300--Sobic010G050200 Sobic002G114800 Sobic002G114800 Sobic008G156300--Sobic002G114800 Sobic002G306700 Sobic002G306700 Sobic008G156300--Sobic002G306700 Sobic001G540100 Sobic001G540100 Sobic008G156300--Sobic001G540100 Sobic007G173700--Sobic002G029300 Sobic004G000100 Sobic004G000100 Sobic007G173700--Sobic004G000100 Sobic007G173700--Sobic001G023100 Sobic001G193100 Sobic001G193100 Sobic007G173700--Sobic001G193100 Sobic007G173700--Sobic001G161700 Sobic001G061200 Sobic001G061200 Sobic007G173700--Sobic001G061200 Sobic007G173700--Sobic002G141700 Sobic001G049400 Sobic001G049400 Sobic007G173700--Sobic001G049400 Sobic003G394200 Sobic003G394200 Sobic007G173700--Sobic003G394200 Sobic002G070600 Sobic002G070600 Sobic001G161700--Sobic002G070600 Sobic001G161700--Sobic008G072200 Sobic001G490500 Sobic001G490500 Sobic001G161700--Sobic001G490500 Sobic001G012900 Sobic001G012900 Sobic001G161700--Sobic001G012900 Sobic001G161700--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic001G161700--Sobic003G346400 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic008G085700 Sobic008G085700 Sobic001G161700--Sobic008G085700 Sobic003G045600 Sobic003G045600 Sobic006G259401--Sobic003G045600 Sobic008G151500 Sobic008G151500 Sobic006G259401--Sobic008G151500 Sobic003G236800 Sobic003G236800 Sobic006G259401--Sobic003G236800 Sobic002G101300 Sobic002G101300 Sobic006G259401--Sobic002G101300 Sobic006G259401--Sobic007G120800 Sobic001G140000 Sobic001G140000 Sobic006G259401--Sobic001G140000 Sobic002G283100 Sobic002G283100 Sobic006G259401--Sobic002G283100 Sobic001G392200 Sobic001G392200 Sobic006G259401--Sobic001G392200 Sobic007G179900 Sobic007G179900 Sobic006G259401--Sobic007G179900 Sobic006G220500 Sobic006G220500 Sobic007G065500--Sobic006G220500 Sobic007G065500--Sobic007G120800 Sobic007G065500--Sobic002G194800 Sobic007G065500--Sobic006G259401 Sobic007G065500--Sobic009G139800 Sobic003G432100 Sobic003G432100 Sobic007G065500--Sobic003G432100 Sobic009G234800 Sobic009G234800 Sobic007G065500--Sobic009G234800 Sobic007G065500--Sobic003G428200 Sobic001G000400 Sobic001G000400 Sobic007G065500--Sobic001G000400
Octagon: transcription factors


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