Gene annotation
Transcriptome id Sobic.001G023100.1
Synonym ACBP4, Sb01g002200
Functional annotation ACBP4, putative, expressed
UniProt C5WTY5
Pfam PF00887 PF01344 PF13415
Panther DB PTHR23244 PTHR23244:SF315
NCBI CDD KOG0379; Kelch repeat-containing proteins
KEGG Orthology -
Gene Ontology GO:0000062; fatty-acyl-CoA binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G05420 : acyl-CoA binding protein 4
RAP-DB (Rice) LOC_Os03g61930.1 : ACBP4, putative, expressed
MaizeGDB (Corn) Zm00025a016374 , Zm00025a051226 , Zm00025a008937 , Zm00025a008936
Brachypodium KQK12274
Barley HORVU5Hr1G117970.18 , HORVU5Hr1G117970.16 , HORVU5Hr1G117970.17 , HORVU5Hr1G117970.14 , HORVU5Hr1G117970.15 , HORVU5Hr1G117970.12 , HORVU5Hr1G117970.13 , HORVU5Hr1G117970.10 , HORVU5Hr1G117970.11 , HORVU5Hr1G117970.8 , HORVU5Hr1G117970.9 , HORVU5Hr1G117970.4 , HORVU5Hr1G117970.5 , HORVU5Hr1G117970.6 , HORVU5Hr1G117970.7 , HORVU5Hr1G117970.1 , HORVU5Hr1G117970.2 , HORVU5Hr1G117970.3
Wheat TraesCS4A02G356400 , TraesCS4A02G356400 , TraesCS5B02G515800 , TraesCS5D02G515900 , TraesCS5D02G515900
Populus -


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cDNA sequences
Sobic.001G023100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
2 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
3 Sobic.009G226400 dynamin family protein, putative, expressed -
4 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
5 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
6 Sobic.008G072200 coatomer subunit delta, putative, expressed -
7 Sobic.001G193100 expressed protein -
8 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
9 Sobic.008G085700 exocyst complex component 5, putative, expressed -
10 Sobic.004G000100 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
11 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
12 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
13 Sobic.002G141700 unc-50, putative, expressed -
14 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
15 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
16 Sobic.005G110499 - K14006: protein transport protein SEC23
17 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
18 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
19 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
20 Sobic.001G061200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22


Gene co-expression network
sample Sobic001G023100 Sobic001G023100 Sobic002G029300 Sobic002G029300 Sobic001G023100--Sobic002G029300 Sobic007G173700 Sobic007G173700 Sobic001G023100--Sobic007G173700 Sobic009G226400 Sobic009G226400 Sobic001G023100--Sobic009G226400 Sobic008G055900 Sobic008G055900 Sobic001G023100--Sobic008G055900 Sobic001G161700 Sobic001G161700 Sobic001G023100--Sobic001G161700 Sobic008G072200 Sobic008G072200 Sobic001G023100--Sobic008G072200 Sobic001G193100 Sobic001G193100 Sobic001G023100--Sobic001G193100 Sobic003G270600 Sobic003G270600 Sobic001G023100--Sobic003G270600 Sobic008G085700 Sobic008G085700 Sobic001G023100--Sobic008G085700 Sobic002G029300--Sobic001G023100 Sobic002G029300--Sobic007G173700 Sobic004G031800 Sobic004G031800 Sobic002G029300--Sobic004G031800 Sobic002G029300--Sobic008G072200 Sobic001G010700 Sobic001G010700 Sobic002G029300--Sobic001G010700 Sobic002G029300--Sobic009G226400 Sobic002G029300--Sobic001G161700 Sobic002G141700 Sobic002G141700 Sobic002G029300--Sobic002G141700 Sobic006G056200 Sobic006G056200 Sobic002G029300--Sobic006G056200 Sobic007G173700--Sobic002G029300 Sobic004G000100 Sobic004G000100 Sobic007G173700--Sobic004G000100 Sobic007G173700--Sobic001G023100 Sobic007G173700--Sobic001G193100 Sobic007G173700--Sobic001G161700 Sobic001G061200 Sobic001G061200 Sobic007G173700--Sobic001G061200 Sobic007G173700--Sobic002G141700 Sobic001G049400 Sobic001G049400 Sobic007G173700--Sobic001G049400 Sobic003G394200 Sobic003G394200 Sobic007G173700--Sobic003G394200 Sobic009G226400--Sobic001G023100 Sobic009G226400--Sobic003G270600 SobicK004100 SobicK004100 Sobic009G226400--SobicK004100 Sobic001G369000 Sobic001G369000 Sobic009G226400--Sobic001G369000 Sobic009G226400--Sobic002G029300 Sobic001G335900 Sobic001G335900 Sobic009G226400--Sobic001G335900 Sobic009G226400--Sobic006G056200 Sobic004G039600 Sobic004G039600 Sobic009G226400--Sobic004G039600 Sobic001G420800 Sobic001G420800 Sobic009G226400--Sobic001G420800 Sobic002G020700 Sobic002G020700 Sobic008G055900--Sobic002G020700 Sobic010G223300 Sobic010G223300 Sobic008G055900--Sobic010G223300 Sobic008G103300 Sobic008G103300 Sobic008G055900--Sobic008G103300 Sobic010G020400 Sobic010G020400 Sobic008G055900--Sobic010G020400 Sobic006G136400 Sobic006G136400 Sobic008G055900--Sobic006G136400 Sobic001G447300 Sobic001G447300 Sobic008G055900--Sobic001G447300 Sobic008G055900--Sobic008G085700 Sobic008G055900--Sobic006G056200 Sobic008G129600 Sobic008G129600 Sobic008G055900--Sobic008G129600 Sobic002G070600 Sobic002G070600 Sobic001G161700--Sobic002G070600 Sobic001G161700--Sobic008G072200 Sobic001G490500 Sobic001G490500 Sobic001G161700--Sobic001G490500 Sobic001G012900 Sobic001G012900 Sobic001G161700--Sobic001G012900 Sobic001G161700--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic001G161700--Sobic003G346400 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic001G161700--Sobic008G085700 Sobic008G072200--Sobic002G070600 Sobic008G072200--Sobic001G161700 Sobic004G336300 Sobic004G336300 Sobic008G072200--Sobic004G336300 Sobic001G115700 Sobic001G115700 Sobic008G072200--Sobic001G115700 Sobic001G117800 Sobic001G117800 Sobic008G072200--Sobic001G117800 Sobic008G072200--Sobic002G029300 Sobic008G072200--Sobic001G490500 Sobic003G134800 Sobic003G134800 Sobic008G072200--Sobic003G134800 Sobic008G072200--Sobic008G085700 Sobic010G223400 Sobic010G223400 Sobic001G193100--Sobic010G223400 Sobic001G193100--Sobic003G394200 Sobic001G193100--Sobic001G012900 Sobic001G193100--Sobic001G061200 Sobic001G193100--Sobic007G173700 Sobic004G084500 Sobic004G084500 Sobic001G193100--Sobic004G084500 Sobic004G060300 Sobic004G060300 Sobic001G193100--Sobic004G060300 Sobic004G078700 Sobic004G078700 Sobic001G193100--Sobic004G078700 Sobic010G074900 Sobic010G074900 Sobic001G193100--Sobic010G074900 Sobic004G236200 Sobic004G236200 Sobic003G270600--Sobic004G236200 Sobic003G270600--Sobic003G394200 Sobic009G229600 Sobic009G229600 Sobic003G270600--Sobic009G229600 Sobic003G427600 Sobic003G427600 Sobic003G270600--Sobic003G427600 Sobic003G270600--Sobic009G226400 Sobic003G270600--Sobic004G039600 Sobic003G270600--Sobic001G369000 Sobic009G049400 Sobic009G049400 Sobic003G270600--Sobic009G049400 Sobic004G228800 Sobic004G228800 Sobic003G270600--Sobic004G228800 Sobic008G085700--Sobic002G020700 Sobic001G449900 Sobic001G449900 Sobic008G085700--Sobic001G449900 Sobic008G085700--Sobic002G070600 Sobic008G085700--Sobic010G020400 Sobic008G085700--Sobic008G055900 Sobic005G110499 Sobic005G110499 Sobic008G085700--Sobic005G110499 Sobic008G085700--Sobic001G049400 Sobic008G085700--Sobic001G161700 Sobic010G192600 Sobic010G192600 Sobic008G085700--Sobic010G192600
Octagon: transcription factors


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