Gene annotation
Transcriptome id Sobic.008G085700.1
Synonym Sb08g008650, SEC10
Functional annotation exocyst complex component 5, putative, expressed
UniProt C5YU26
Pfam PF07393
Panther DB PTHR12100 PTHR12100:SF0
NCBI CDD KOG3745; Exocyst subunit - Sec10p
KEGG Orthology -
Gene Ontology GO:0006887; exocytosis GO:0005737cytoplasm


Orthologs (automatic annotation)
TAIR AT5G12370 : exocyst complex component sec10
RAP-DB (Rice) LOC_Os12g13590.1 : exocyst complex component 5, putative, expressed
MaizeGDB (Corn) Zm00025a024991
Brachypodium KQJ91752 , KQJ91753 , PNT65273
Barley HORVU5Hr1G035100.10 , HORVU5Hr1G035100.11 , HORVU5Hr1G035100.12 , HORVU5Hr1G035100.13 , HORVU5Hr1G035100.14 , HORVU5Hr1G035100.15 , HORVU5Hr1G035100.16 , HORVU5Hr1G035100.17 , HORVU5Hr1G035100.32 , HORVU5Hr1G035100.19 , HORVU5Hr1G035100.30 , HORVU5Hr1G035100.31 , HORVU5Hr1G035100.34 , HORVU5Hr1G035100.35 , HORVU5Hr1G035100.2 , HORVU5Hr1G035100.3 , HORVU5Hr1G035100.6 , HORVU5Hr1G035100.7 , HORVU5Hr1G035100.4 , HORVU5Hr1G035100.5 , HORVU5Hr1G035100.8 , HORVU5Hr1G035100.9 , HORVU5Hr1G035100.25 , HORVU5Hr1G035100.24 , HORVU5Hr1G035100.27 , HORVU5Hr1G035100.26 , HORVU5Hr1G035100.21 , HORVU5Hr1G035100.20 , HORVU5Hr1G035100.23 , HORVU5Hr1G035100.22 , HORVU5Hr1G035100.29 , HORVU5Hr1G035100.28 , HORVU5Hr1G035100.18 , HORVU5Hr1G035100.33
Wheat TraesCS5B02G111300 , TraesCS5B02G111300 , TraesCS5D02G117200 , TraesCS5D02G117200 , TraesCS5A02G106300
Populus PNT03809 , PNT03810 , PNT03811


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
2 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
3 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
4 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
5 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
6 Sobic.005G110499 - K14006: protein transport protein SEC23
7 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
8 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
9 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
10 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
11 Sobic.007G005500 ECT protein, putative, expressed -
12 Sobic.008G072200 coatomer subunit delta, putative, expressed -
13 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
14 Sobic.006G260500 expressed protein -
15 Sobic.001G358500 GA20734-PA, putative, expressed -
16 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
17 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
18 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
19 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
20 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B


Gene co-expression network
sample Sobic008G085700 Sobic008G085700 Sobic002G020700 Sobic002G020700 Sobic008G085700--Sobic002G020700 Sobic001G449900 Sobic001G449900 Sobic008G085700--Sobic001G449900 Sobic002G070600 Sobic002G070600 Sobic008G085700--Sobic002G070600 Sobic010G020400 Sobic010G020400 Sobic008G085700--Sobic010G020400 Sobic008G055900 Sobic008G055900 Sobic008G085700--Sobic008G055900 Sobic005G110499 Sobic005G110499 Sobic008G085700--Sobic005G110499 Sobic001G049400 Sobic001G049400 Sobic008G085700--Sobic001G049400 Sobic001G161700 Sobic001G161700 Sobic008G085700--Sobic001G161700 Sobic010G192600 Sobic010G192600 Sobic008G085700--Sobic010G192600 Sobic002G020700--Sobic010G020400 Sobic002G020700--Sobic008G085700 Sobic002G020700--Sobic008G055900 Sobic001G333100 Sobic001G333100 Sobic002G020700--Sobic001G333100 Sobic010G223300 Sobic010G223300 Sobic002G020700--Sobic010G223300 Sobic002G020700--Sobic001G449900 Sobic004G039600 Sobic004G039600 Sobic002G020700--Sobic004G039600 Sobic008G082500 Sobic008G082500 Sobic002G020700--Sobic008G082500 Sobic007G054800 Sobic007G054800 Sobic002G020700--Sobic007G054800 Sobic001G449900--Sobic010G223300 Sobic001G449900--Sobic002G020700 Sobic001G449900--Sobic008G085700 Sobic001G301200 Sobic001G301200 Sobic001G449900--Sobic001G301200 Sobic003G189600 Sobic003G189600 Sobic001G449900--Sobic003G189600 Sobic001G428800 Sobic001G428800 Sobic001G449900--Sobic001G428800 Sobic003G029600 Sobic003G029600 Sobic001G449900--Sobic003G029600 Sobic001G449900--Sobic010G020400 Sobic007G005500 Sobic007G005500 Sobic001G449900--Sobic007G005500 Sobic008G072200 Sobic008G072200 Sobic002G070600--Sobic008G072200 Sobic001G117800 Sobic001G117800 Sobic002G070600--Sobic001G117800 Sobic002G070600--Sobic001G161700 Sobic002G070600--Sobic008G085700 Sobic004G336300 Sobic004G336300 Sobic002G070600--Sobic004G336300 Sobic002G070600--Sobic003G029600 Sobic006G021700 Sobic006G021700 Sobic002G070600--Sobic006G021700 Sobic009G118900 Sobic009G118900 Sobic002G070600--Sobic009G118900 Sobic010G178600 Sobic010G178600 Sobic002G070600--Sobic010G178600 Sobic010G020400--Sobic002G020700 Sobic010G020400--Sobic001G049400 Sobic003G338500 Sobic003G338500 Sobic010G020400--Sobic003G338500 Sobic001G014800 Sobic001G014800 Sobic010G020400--Sobic001G014800 Sobic002G008800 Sobic002G008800 Sobic010G020400--Sobic002G008800 Sobic010G020400--Sobic008G055900 Sobic008G033500 Sobic008G033500 Sobic010G020400--Sobic008G033500 Sobic010G020400--Sobic001G333100 Sobic010G020400--Sobic010G223300 Sobic008G055900--Sobic002G020700 Sobic008G055900--Sobic010G223300 Sobic008G103300 Sobic008G103300 Sobic008G055900--Sobic008G103300 Sobic008G055900--Sobic010G020400 Sobic006G136400 Sobic006G136400 Sobic008G055900--Sobic006G136400 Sobic001G447300 Sobic001G447300 Sobic008G055900--Sobic001G447300 Sobic008G055900--Sobic008G085700 Sobic006G056200 Sobic006G056200 Sobic008G055900--Sobic006G056200 Sobic008G129600 Sobic008G129600 Sobic008G055900--Sobic008G129600 Sobic005G110499--Sobic003G189600 Sobic001G474400 Sobic001G474400 Sobic005G110499--Sobic001G474400 Sobic001G308400 Sobic001G308400 Sobic005G110499--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic005G110499--Sobic003G394200 Sobic004G053500 Sobic004G053500 Sobic005G110499--Sobic004G053500 Sobic002G401500 Sobic002G401500 Sobic005G110499--Sobic002G401500 Sobic005G110499--Sobic006G021700 Sobic002G371700 Sobic002G371700 Sobic005G110499--Sobic002G371700 Sobic003G209200 Sobic003G209200 Sobic005G110499--Sobic003G209200 Sobic001G049400--Sobic010G020400 Sobic001G465400 Sobic001G465400 Sobic001G049400--Sobic001G465400 Sobic001G049400--Sobic008G085700 Sobic004G078700 Sobic004G078700 Sobic001G049400--Sobic004G078700 Sobic001G211900 Sobic001G211900 Sobic001G049400--Sobic001G211900 Sobic003G302200 Sobic003G302200 Sobic001G049400--Sobic003G302200 Sobic001G049400--Sobic008G055900 Sobic001G049400--Sobic003G338500 Sobic007G173700 Sobic007G173700 Sobic001G049400--Sobic007G173700 Sobic001G161700--Sobic002G070600 Sobic001G161700--Sobic008G072200 Sobic001G490500 Sobic001G490500 Sobic001G161700--Sobic001G490500 Sobic001G012900 Sobic001G012900 Sobic001G161700--Sobic001G012900 Sobic001G023100 Sobic001G023100 Sobic001G161700--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic001G161700--Sobic003G346400 Sobic004G000100 Sobic004G000100 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic001G161700--Sobic008G085700 Sobic001G097900 Sobic001G097900 Sobic010G192600--Sobic001G097900 Sobic010G192600--Sobic001G474400 Sobic001G358500 Sobic001G358500 Sobic010G192600--Sobic001G358500 Sobic007G118500 Sobic007G118500 Sobic010G192600--Sobic007G118500 Sobic010G192600--Sobic008G085700 Sobic010G192600--Sobic005G110499 Sobic002G364900 Sobic002G364900 Sobic010G192600--Sobic002G364900 Sobic001G115700 Sobic001G115700 Sobic010G192600--Sobic001G115700 Sobic003G304400 Sobic003G304400 Sobic010G192600--Sobic003G304400
Octagon: transcription factors


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