Gene annotation
Transcriptome id Sobic.010G192600.2,Sobic.010G192600.1
Synonym Sb10g024210
Functional annotation tubulin binding cofactor C, putative, expressed
UniProt A0A194YK89 , A0A194YL93
Pfam PF07986
Panther DB PTHR16052 PTHR16052:SF1
NCBI CDD KOG4416; Uncharacterized conserved protein
KEGG Orthology K16810; TBCC domain-containing protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57890 : Tubulin binding cofactor C domain-containing protein
RAP-DB (Rice) LOC_Os06g41110.1 : tubulin binding cofactor C, putative, expressed
MaizeGDB (Corn) Zm00025a042118 , Zm00025a019653 , Zm00025a034665
Brachypodium KQK17664 , KQJ93841
Barley HORVU6Hr1G033580.3 , HORVU6Hr1G033580.2 , HORVU6Hr1G033580.1 , HORVU6Hr1G033580.7 , HORVU6Hr1G033580.6 , HORVU6Hr1G033580.5 , HORVU6Hr1G033580.4 , HORVU7Hr1G094510.6 , HORVU7Hr1G094510.7 , HORVU7Hr1G094510.4 , HORVU7Hr1G094510.5 , HORVU7Hr1G094510.2 , HORVU7Hr1G094510.3 , HORVU7Hr1G094510.1
Wheat TraesCS6B02G193300 , TraesCS6B02G193300 , TraesCS7D02G396800 , TraesCS7A02G403300 , TraesCS6D02G154500 , TraesCS6D02G154500 , TraesCS6D02G154500 , TraesCS7A02G403300 , TraesCS7A02G403300 , TraesCS7A02G403300 , TraesCS7D02G396800 , TraesCS7D02G396800 , TraesCS6A02G165900 , TraesCS6A02G165900 , TraesCS6A02G165900 , TraesCS6A02G165900 , TraesCS7B02G302800 , TraesCS7B02G302800 , TraesCS7B02G302800
Populus -


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cDNA sequences
Sobic.010G192600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G097900 expressed protein -
2 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
3 Sobic.001G358500 GA20734-PA, putative, expressed -
4 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
5 Sobic.008G085700 exocyst complex component 5, putative, expressed -
6 Sobic.005G110499 - K14006: protein transport protein SEC23
7 Sobic.002G364900 PPR repeat domain containing protein, putative, expressed -
8 Sobic.001G115700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K03934: NADH dehydrogenase (ubiquinone) Fe-S protein 1
9 Sobic.003G304400 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50
10 Sobic.008G019532 - -
11 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
12 Sobic.006G282200 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
13 Sobic.005G059500 expressed protein -
14 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
15 Sobic.004G060300 DNA binding protein, putative, expressed -
16 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
17 Sobic.006G128100 lipase, putative, expressed -
18 Sobic.003G397900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed K12667: SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)
19 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
20 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein


Gene co-expression network
sample Sobic010G192600 Sobic010G192600 Sobic001G097900 Sobic001G097900 Sobic010G192600--Sobic001G097900 Sobic001G474400 Sobic001G474400 Sobic010G192600--Sobic001G474400 Sobic001G358500 Sobic001G358500 Sobic010G192600--Sobic001G358500 Sobic007G118500 Sobic007G118500 Sobic010G192600--Sobic007G118500 Sobic008G085700 Sobic008G085700 Sobic010G192600--Sobic008G085700 Sobic005G110499 Sobic005G110499 Sobic010G192600--Sobic005G110499 Sobic002G364900 Sobic002G364900 Sobic010G192600--Sobic002G364900 Sobic001G115700 Sobic001G115700 Sobic010G192600--Sobic001G115700 Sobic003G304400 Sobic003G304400 Sobic010G192600--Sobic003G304400 Sobic001G097900--Sobic010G192600 Sobic001G097900--Sobic001G474400 Sobic001G445500 Sobic001G445500 Sobic001G097900--Sobic001G445500 Sobic006G106300 Sobic006G106300 Sobic001G097900--Sobic006G106300 Sobic001G097900--Sobic005G110499 Sobic002G227500 Sobic002G227500 Sobic001G097900--Sobic002G227500 Sobic001G308400 Sobic001G308400 Sobic001G097900--Sobic001G308400 Sobic009G040250 Sobic009G040250 Sobic001G097900--Sobic009G040250 Sobic005G114500 Sobic005G114500 Sobic001G097900--Sobic005G114500 Sobic001G474400--Sobic005G110499 Sobic003G397900 Sobic003G397900 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G474400--Sobic001G097900 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic010G223400 Sobic010G223400 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic006G265600 Sobic006G265600 Sobic001G474400--Sobic006G265600 Sobic001G428800 Sobic001G428800 Sobic001G358500--Sobic001G428800 Sobic001G358500--Sobic010G192600 Sobic008G018500 Sobic008G018500 Sobic001G358500--Sobic008G018500 Sobic001G358500--Sobic008G085700 Sobic001G358500--Sobic001G467100 Sobic003G182300 Sobic003G182300 Sobic001G358500--Sobic003G182300 Sobic006G039400 Sobic006G039400 Sobic001G358500--Sobic006G039400 Sobic001G049400 Sobic001G049400 Sobic001G358500--Sobic001G049400 Sobic001G211900 Sobic001G211900 Sobic001G358500--Sobic001G211900 Sobic003G394500 Sobic003G394500 Sobic007G118500--Sobic003G394500 Sobic004G060300 Sobic004G060300 Sobic007G118500--Sobic004G060300 Sobic002G070300 Sobic002G070300 Sobic007G118500--Sobic002G070300 Sobic010G133400 Sobic010G133400 Sobic007G118500--Sobic010G133400 Sobic001G378800 Sobic001G378800 Sobic007G118500--Sobic001G378800 Sobic006G232800 Sobic006G232800 Sobic007G118500--Sobic006G232800 Sobic001G455000 Sobic001G455000 Sobic007G118500--Sobic001G455000 Sobic001G356100 Sobic001G356100 Sobic007G118500--Sobic001G356100 Sobic008G171400 Sobic008G171400 Sobic007G118500--Sobic008G171400 Sobic002G020700 Sobic002G020700 Sobic008G085700--Sobic002G020700 Sobic001G449900 Sobic001G449900 Sobic008G085700--Sobic001G449900 Sobic002G070600 Sobic002G070600 Sobic008G085700--Sobic002G070600 Sobic010G020400 Sobic010G020400 Sobic008G085700--Sobic010G020400 Sobic008G055900 Sobic008G055900 Sobic008G085700--Sobic008G055900 Sobic008G085700--Sobic005G110499 Sobic008G085700--Sobic001G049400 Sobic001G161700 Sobic001G161700 Sobic008G085700--Sobic001G161700 Sobic008G085700--Sobic010G192600 Sobic003G189600 Sobic003G189600 Sobic005G110499--Sobic003G189600 Sobic005G110499--Sobic001G474400 Sobic005G110499--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic005G110499--Sobic003G394200 Sobic004G053500 Sobic004G053500 Sobic005G110499--Sobic004G053500 Sobic002G401500 Sobic002G401500 Sobic005G110499--Sobic002G401500 Sobic006G021700 Sobic006G021700 Sobic005G110499--Sobic006G021700 Sobic002G371700 Sobic002G371700 Sobic005G110499--Sobic002G371700 Sobic003G209200 Sobic003G209200 Sobic005G110499--Sobic003G209200 Sobic002G364900--Sobic003G304400 Sobic002G364900--Sobic010G192600 Sobic002G364900--Sobic006G265600 Sobic001G015400 Sobic001G015400 Sobic002G364900--Sobic001G015400 Sobic002G364900--Sobic002G227500 Sobic002G364900--Sobic006G106300 Sobic001G099900 Sobic001G099900 Sobic002G364900--Sobic001G099900 Sobic001G085800 Sobic001G085800 Sobic002G364900--Sobic001G085800 Sobic002G364900--Sobic001G474400 Sobic001G458800 Sobic001G458800 Sobic001G115700--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic001G115700--Sobic003G034900 Sobic001G465400 Sobic001G465400 Sobic001G115700--Sobic001G465400 Sobic008G072200 Sobic008G072200 Sobic001G115700--Sobic008G072200 Sobic004G347600 Sobic004G347600 Sobic001G115700--Sobic004G347600 Sobic005G018800 Sobic005G018800 Sobic001G115700--Sobic005G018800 Sobic009G191400 Sobic009G191400 Sobic001G115700--Sobic009G191400 Sobic003G200800 Sobic003G200800 Sobic001G115700--Sobic003G200800 Sobic002G186300 Sobic002G186300 Sobic001G115700--Sobic002G186300 Sobic003G304400--Sobic002G364900 Sobic003G304400--Sobic003G397900 Sobic002G398700 Sobic002G398700 Sobic003G304400--Sobic002G398700 Sobic003G304400--Sobic001G474400 Sobic002G150700 Sobic002G150700 Sobic003G304400--Sobic002G150700 Sobic003G304400--Sobic010G192600 Sobic003G202100 Sobic003G202100 Sobic003G304400--Sobic003G202100 Sobic003G304400--Sobic001G015400 Sobic003G304400--Sobic006G265600
Octagon: transcription factors


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