Gene annotation
Transcriptome id Sobic.001G115700.1
Synonym EMB1467, Sb01g010210, CI76
Functional annotation 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed
UniProt C5WN22
Pfam PF09326 PF10588 PF13510 PF00384
Panther DB PTHR11615 PTHR11615:SF115
NCBI CDD -
KEGG Orthology K03934; NADH dehydrogenase (ubiquinone) Fe-S protein 1
Gene Ontology GO:0016651; oxidoreductase activity, acting on NAD(P)H GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G37510 : NADH-ubiquinone dehydrogenase, mitochondrial, putative
RAP-DB (Rice) LOC_Os03g50540.1 : 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016962 , Zm00025a007874
Brachypodium KQK13636
Barley HORVU4Hr1G007850.1 , HORVU4Hr1G007850.2
Wheat TraesCS4B02G047900 , TraesCS4A02G266400 , TraesCS4D02G047800
Populus PNS93285 , PNS96755


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cDNA sequences
Sobic.001G115700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
2 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
3 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
4 Sobic.008G072200 coatomer subunit delta, putative, expressed -
5 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
6 Sobic.005G018800 expressed protein -
7 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
8 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d
9 Sobic.002G186300 serine/threonine-protein kinase 16, putative, expressed K08856: serine/threonine kinase 16
10 Sobic.002G396700 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed K03942: NADH dehydrogenase (ubiquinone) flavoprotein 1
11 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
12 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
13 Sobic.007G171500 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed K00413: CYC1, CYT1, ubiquinol-cytochrome c reductase cytochrome c1 subunit
14 Sobic.007G161200 expressed protein -
15 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
16 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
17 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
18 Sobic.001G387800 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
19 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
20 Sobic.008G171400 phosphonate metabolism protein-related, putative, expressed -


Gene co-expression network
sample Sobic001G115700 Sobic001G115700 Sobic001G458800 Sobic001G458800 Sobic001G115700--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic001G115700--Sobic003G034900 Sobic001G465400 Sobic001G465400 Sobic001G115700--Sobic001G465400 Sobic008G072200 Sobic008G072200 Sobic001G115700--Sobic008G072200 Sobic004G347600 Sobic004G347600 Sobic001G115700--Sobic004G347600 Sobic005G018800 Sobic005G018800 Sobic001G115700--Sobic005G018800 Sobic009G191400 Sobic009G191400 Sobic001G115700--Sobic009G191400 Sobic003G200800 Sobic003G200800 Sobic001G115700--Sobic003G200800 Sobic002G186300 Sobic002G186300 Sobic001G115700--Sobic002G186300 Sobic001G458800--Sobic003G034900 Sobic009G224400 Sobic009G224400 Sobic001G458800--Sobic009G224400 Sobic006G058900 Sobic006G058900 Sobic001G458800--Sobic006G058900 Sobic001G458800--Sobic001G115700 Sobic007G171500 Sobic007G171500 Sobic001G458800--Sobic007G171500 Sobic001G073600 Sobic001G073600 Sobic001G458800--Sobic001G073600 Sobic001G458800--Sobic002G186300 Sobic002G395000 Sobic002G395000 Sobic001G458800--Sobic002G395000 Sobic001G031900 Sobic001G031900 Sobic001G458800--Sobic001G031900 Sobic003G034900--Sobic001G458800 Sobic003G034900--Sobic001G465400 Sobic004G093600 Sobic004G093600 Sobic003G034900--Sobic004G093600 Sobic003G034900--Sobic001G115700 Sobic001G047600 Sobic001G047600 Sobic003G034900--Sobic001G047600 Sobic003G034900--Sobic007G171500 Sobic003G034900--Sobic009G224400 Sobic003G034900--Sobic004G347600 Sobic001G457000 Sobic001G457000 Sobic003G034900--Sobic001G457000 Sobic001G465400--Sobic003G034900 Sobic006G012700 Sobic006G012700 Sobic001G465400--Sobic006G012700 Sobic001G465400--Sobic001G115700 Sobic001G378200 Sobic001G378200 Sobic001G465400--Sobic001G378200 Sobic004G078700 Sobic004G078700 Sobic001G465400--Sobic004G078700 Sobic004G000100 Sobic004G000100 Sobic001G465400--Sobic004G000100 Sobic001G465400--Sobic001G047600 Sobic001G008100 Sobic001G008100 Sobic001G465400--Sobic001G008100 Sobic001G465400--Sobic004G347600 Sobic002G070600 Sobic002G070600 Sobic008G072200--Sobic002G070600 Sobic001G161700 Sobic001G161700 Sobic008G072200--Sobic001G161700 Sobic004G336300 Sobic004G336300 Sobic008G072200--Sobic004G336300 Sobic008G072200--Sobic001G115700 Sobic001G117800 Sobic001G117800 Sobic008G072200--Sobic001G117800 Sobic002G029300 Sobic002G029300 Sobic008G072200--Sobic002G029300 Sobic001G490500 Sobic001G490500 Sobic008G072200--Sobic001G490500 Sobic003G134800 Sobic003G134800 Sobic008G072200--Sobic003G134800 Sobic008G085700 Sobic008G085700 Sobic008G072200--Sobic008G085700 Sobic004G347600--Sobic009G191400 Sobic004G347600--Sobic001G073600 Sobic004G347600--Sobic003G034900 Sobic004G347600--Sobic001G458800 Sobic004G347600--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic004G347600--Sobic001G112400 Sobic004G347600--Sobic001G115700 Sobic007G161200 Sobic007G161200 Sobic004G347600--Sobic007G161200 Sobic001G443200 Sobic001G443200 Sobic004G347600--Sobic001G443200 Sobic005G018800--Sobic003G200800 Sobic008G021200 Sobic008G021200 Sobic005G018800--Sobic008G021200 Sobic004G060100 Sobic004G060100 Sobic005G018800--Sobic004G060100 Sobic005G018800--Sobic007G161200 Sobic009G256000 Sobic009G256000 Sobic005G018800--Sobic009G256000 Sobic005G018800--Sobic001G115700 Sobic004G283600 Sobic004G283600 Sobic005G018800--Sobic004G283600 Sobic001G304000 Sobic001G304000 Sobic005G018800--Sobic001G304000 Sobic005G004100 Sobic005G004100 Sobic005G018800--Sobic005G004100 Sobic009G191400--Sobic001G073600 Sobic009G191400--Sobic009G224400 Sobic009G191400--Sobic004G347600 Sobic007G119600 Sobic007G119600 Sobic009G191400--Sobic007G119600 Sobic003G135600 Sobic003G135600 Sobic009G191400--Sobic003G135600 Sobic004G344800 Sobic004G344800 Sobic009G191400--Sobic004G344800 Sobic002G262200 Sobic002G262200 Sobic009G191400--Sobic002G262200 Sobic009G191400--Sobic001G458800 Sobic002G396700 Sobic002G396700 Sobic009G191400--Sobic002G396700 Sobic003G200800--Sobic005G018800 Sobic003G200800--Sobic007G161200 Sobic003G200800--Sobic008G021200 Sobic003G200800--Sobic004G060100 Sobic003G200800--Sobic001G115700 Sobic003G200800--Sobic009G256000 Sobic003G200800--Sobic004G283600 Sobic001G428800 Sobic001G428800 Sobic003G200800--Sobic001G428800 Sobic003G200800--Sobic004G347600 Sobic002G186300--Sobic001G458800 Sobic002G186300--Sobic003G034900 Sobic002G186300--Sobic007G119600 Sobic004G297700 Sobic004G297700 Sobic002G186300--Sobic004G297700 Sobic004G244000 Sobic004G244000 Sobic002G186300--Sobic004G244000 Sobic002G186300--Sobic001G115700 Sobic002G186300--Sobic009G224400 Sobic002G186300--Sobic001G457000 Sobic008G057900 Sobic008G057900 Sobic002G186300--Sobic008G057900
Octagon: transcription factors


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