Gene annotation
Transcriptome id Sobic.001G458800.1
Synonym Sb01g043060, MPPBETA
Functional annotation mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed
UniProt C5WSU8
Pfam PF05193 PF00675
Panther DB PTHR11851 PTHR11851:SF133
NCBI CDD -
KEGG Orthology K17732; PMPCB, mitochondrial-processing peptidase subunit beta
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02090 : Insulinase (Peptidase family M16) protein
RAP-DB (Rice) LOC_Os03g11410.1 : mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a053094 , Zm00025a046308 , Zm00025a001275 , Zm00025a016178 , Zm00025a046236
Brachypodium KQK22931
Barley HORVU4Hr1G068460.3 , HORVU4Hr1G068460.1 , HORVU4Hr1G068460.4 , HORVU0Hr1G008980.1
Wheat TraesCS4D02G248100 , TraesCS4D02G248100 , TraesCS4A02G056200 , TraesCS4A02G056200 , TraesCS4A02G056200 , TraesCS4B02G248700 , TraesCS4B02G248700
Populus -


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cDNA sequences
Sobic.001G458800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
2 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
3 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
4 Sobic.001G115700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K03934: NADH dehydrogenase (ubiquinone) Fe-S protein 1
5 Sobic.007G171500 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed K00413: CYC1, CYT1, ubiquinol-cytochrome c reductase cytochrome c1 subunit
6 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
7 Sobic.002G186300 serine/threonine-protein kinase 16, putative, expressed K08856: serine/threonine kinase 16
8 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
9 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
10 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
11 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
12 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
13 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
14 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
15 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
16 Sobic.007G159700 expressed protein K02138: ATPeF0D, ATP5H, F-type H+-transporting ATPase subunit d
17 Sobic.004G244000 dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
18 Sobic.002G262200 expressed protein -
19 Sobic.003G028200 expressed protein -
20 Sobic.008G150300 Lg106, putative, expressed -


Gene co-expression network
sample Sobic001G458800 Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic001G458800--Sobic003G034900 Sobic009G224400 Sobic009G224400 Sobic001G458800--Sobic009G224400 Sobic006G058900 Sobic006G058900 Sobic001G458800--Sobic006G058900 Sobic001G115700 Sobic001G115700 Sobic001G458800--Sobic001G115700 Sobic007G171500 Sobic007G171500 Sobic001G458800--Sobic007G171500 Sobic001G073600 Sobic001G073600 Sobic001G458800--Sobic001G073600 Sobic002G186300 Sobic002G186300 Sobic001G458800--Sobic002G186300 Sobic002G395000 Sobic002G395000 Sobic001G458800--Sobic002G395000 Sobic001G031900 Sobic001G031900 Sobic001G458800--Sobic001G031900 Sobic003G034900--Sobic001G458800 Sobic001G465400 Sobic001G465400 Sobic003G034900--Sobic001G465400 Sobic004G093600 Sobic004G093600 Sobic003G034900--Sobic004G093600 Sobic003G034900--Sobic001G115700 Sobic001G047600 Sobic001G047600 Sobic003G034900--Sobic001G047600 Sobic003G034900--Sobic007G171500 Sobic003G034900--Sobic009G224400 Sobic004G347600 Sobic004G347600 Sobic003G034900--Sobic004G347600 Sobic001G457000 Sobic001G457000 Sobic003G034900--Sobic001G457000 Sobic009G224400--Sobic001G073600 Sobic009G191400 Sobic009G191400 Sobic009G224400--Sobic009G191400 Sobic009G224400--Sobic002G395000 Sobic007G119600 Sobic007G119600 Sobic009G224400--Sobic007G119600 Sobic003G135600 Sobic003G135600 Sobic009G224400--Sobic003G135600 Sobic009G224400--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic009G224400--Sobic004G155100 Sobic009G224400--Sobic003G034900 Sobic002G262200 Sobic002G262200 Sobic009G224400--Sobic002G262200 Sobic006G058900--Sobic001G031900 Sobic006G058900--Sobic001G458800 Sobic004G202100 Sobic004G202100 Sobic006G058900--Sobic004G202100 Sobic006G058900--Sobic002G395000 Sobic006G058900--Sobic007G171500 Sobic002G309500 Sobic002G309500 Sobic006G058900--Sobic002G309500 Sobic004G344800 Sobic004G344800 Sobic006G058900--Sobic004G344800 Sobic006G058900--Sobic003G034900 Sobic003G185500 Sobic003G185500 Sobic006G058900--Sobic003G185500 Sobic001G115700--Sobic001G458800 Sobic001G115700--Sobic003G034900 Sobic001G115700--Sobic001G465400 Sobic008G072200 Sobic008G072200 Sobic001G115700--Sobic008G072200 Sobic001G115700--Sobic004G347600 Sobic005G018800 Sobic005G018800 Sobic001G115700--Sobic005G018800 Sobic001G115700--Sobic009G191400 Sobic003G200800 Sobic003G200800 Sobic001G115700--Sobic003G200800 Sobic001G115700--Sobic002G186300 Sobic004G297700 Sobic004G297700 Sobic007G171500--Sobic004G297700 Sobic007G171500--Sobic003G034900 Sobic007G171500--Sobic001G458800 Sobic007G171500--Sobic009G224400 Sobic010G032600 Sobic010G032600 Sobic007G171500--Sobic010G032600 Sobic007G171500--Sobic002G395000 Sobic007G171500--Sobic006G058900 Sobic007G171500--Sobic009G191400 Sobic007G171500--Sobic001G457000 Sobic001G073600--Sobic009G191400 Sobic001G073600--Sobic009G224400 Sobic001G073600--Sobic003G135600 Sobic001G073600--Sobic002G395000 Sobic001G073600--Sobic004G344800 Sobic001G073600--Sobic007G119600 Sobic001G073600--Sobic004G347600 Sobic001G073600--Sobic001G458800 Sobic001G073600--Sobic004G155100 Sobic002G186300--Sobic001G458800 Sobic002G186300--Sobic003G034900 Sobic002G186300--Sobic007G119600 Sobic002G186300--Sobic004G297700 Sobic004G244000 Sobic004G244000 Sobic002G186300--Sobic004G244000 Sobic002G186300--Sobic001G115700 Sobic002G186300--Sobic009G224400 Sobic002G186300--Sobic001G457000 Sobic008G057900 Sobic008G057900 Sobic002G186300--Sobic008G057900 Sobic004G260200 Sobic004G260200 Sobic002G395000--Sobic004G260200 Sobic002G395000--Sobic003G135600 Sobic002G395000--Sobic009G224400 Sobic003G238500 Sobic003G238500 Sobic002G395000--Sobic003G238500 Sobic002G309700 Sobic002G309700 Sobic002G395000--Sobic002G309700 Sobic002G395000--Sobic001G073600 Sobic002G395000--Sobic004G155100 Sobic007G023400 Sobic007G023400 Sobic002G395000--Sobic007G023400 Sobic002G078300 Sobic002G078300 Sobic002G395000--Sobic002G078300 Sobic001G031900--Sobic006G058900 Sobic001G031900--Sobic004G202100 Sobic001G031900--Sobic002G395000 Sobic001G350600 Sobic001G350600 Sobic001G031900--Sobic001G350600 Sobic001G031900--Sobic004G344800 Sobic003G152900 Sobic003G152900 Sobic001G031900--Sobic003G152900 Sobic004G170400 Sobic004G170400 Sobic001G031900--Sobic004G170400 Sobic001G031900--Sobic001G458800 Sobic004G030000 Sobic004G030000 Sobic001G031900--Sobic004G030000
Octagon: transcription factors


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