Gene annotation
Transcriptome id Sobic.004G244000.1
Synonym E1ALPHA, AT-E1ALPHA, Sb04g028450
Functional annotation dehydrogenase E1 component domain containing protein, expressed
UniProt C5XZ73
Pfam PF00676
Panther DB PTHR11516 PTHR11516:SF38
NCBI CDD -
KEGG Orthology K00161; PDHA, pyruvate dehydrogenase E1 component alpha subunit
Gene Ontology GO:0016624; oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G59900 : pyruvate dehydrogenase complex E1 alpha subunit
RAP-DB (Rice) LOC_Os02g50620.1 : dehydrogenase E1 component domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049391 , Zm00025a021979 , Zm00025a033240
Brachypodium KQK18751 , KQK02000
Barley HORVU7Hr1G040460.8 , HORVU6Hr1G076810.2 , HORVU6Hr1G076810.3 , HORVU6Hr1G076810.1 , HORVU7Hr1G040460.13 , HORVU7Hr1G040460.12 , HORVU7Hr1G040460.11 , HORVU7Hr1G040460.10 , HORVU7Hr1G040460.15 , HORVU7Hr1G040460.14 , HORVU7Hr1G040460.2 , HORVU7Hr1G040460.1 , HORVU7Hr1G040460.4
Wheat TraesCS6D02G291100 , TraesCS7A02G238900 , TraesCS7A02G238900 , TraesCS6B02G342000 , TraesCS7B02G103800 , TraesCS7B02G103800 , TraesCS7D02G199900 , TraesCS6A02G311800
Populus PNT14565 , PNT14566 , PNT14567 , PNT25583


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cDNA sequences
Sobic.004G244000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G297700 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
2 Sobic.002G186300 serine/threonine-protein kinase 16, putative, expressed K08856: serine/threonine kinase 16
3 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
4 Sobic.007G171500 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed K00413: CYC1, CYT1, ubiquinol-cytochrome c reductase cytochrome c1 subunit
5 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
6 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
7 Sobic.001G457000 ATP synthase gamma chain, putative, expressed K02136: ATPeF1G, ATP5C1, F-type H+-transporting ATPase subunit gamma
8 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
9 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
10 Sobic.006G012700 expressed protein -
11 Sobic.001G115700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K03934: NADH dehydrogenase (ubiquinone) Fe-S protein 1
12 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
13 Sobic.007G023400 succinate dehydrogenase iron-sulfur subunit 2,mitochondrial precursor, putative, expressed K00235: SDHB, succinate dehydrogenase (ubiquinone) iron-sulfur subunit
14 Sobic.009G259200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
15 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
16 Sobic.008G171400 phosphonate metabolism protein-related, putative, expressed -
17 Sobic.002G079700 ribosomal protein L22, putative, expressed K02890: RP-L22, MRPL22, large subunit ribosomal protein L22
18 Sobic.009G209900 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
19 Sobic.004G202100 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
20 Sobic.001G304000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase


Gene co-expression network
sample Sobic004G244000 Sobic004G244000 Sobic004G297700 Sobic004G297700 Sobic004G244000--Sobic004G297700 Sobic002G186300 Sobic002G186300 Sobic004G244000--Sobic002G186300 Sobic003G034900 Sobic003G034900 Sobic004G244000--Sobic003G034900 Sobic007G171500 Sobic007G171500 Sobic004G244000--Sobic007G171500 Sobic007G119600 Sobic007G119600 Sobic004G244000--Sobic007G119600 Sobic001G458800 Sobic001G458800 Sobic004G244000--Sobic001G458800 Sobic001G457000 Sobic001G457000 Sobic004G244000--Sobic001G457000 Sobic009G224400 Sobic009G224400 Sobic004G244000--Sobic009G224400 Sobic006G058900 Sobic006G058900 Sobic004G244000--Sobic006G058900 Sobic004G297700--Sobic007G171500 Sobic010G032600 Sobic010G032600 Sobic004G297700--Sobic010G032600 Sobic006G276700 Sobic006G276700 Sobic004G297700--Sobic006G276700 Sobic004G297700--Sobic002G186300 Sobic004G297700--Sobic004G244000 Sobic007G023400 Sobic007G023400 Sobic004G297700--Sobic007G023400 Sobic004G297700--Sobic001G457000 Sobic004G202100 Sobic004G202100 Sobic004G297700--Sobic004G202100 Sobic004G297700--Sobic003G034900 Sobic002G186300--Sobic001G458800 Sobic002G186300--Sobic003G034900 Sobic002G186300--Sobic007G119600 Sobic002G186300--Sobic004G297700 Sobic002G186300--Sobic004G244000 Sobic001G115700 Sobic001G115700 Sobic002G186300--Sobic001G115700 Sobic002G186300--Sobic009G224400 Sobic002G186300--Sobic001G457000 Sobic008G057900 Sobic008G057900 Sobic002G186300--Sobic008G057900 Sobic003G034900--Sobic001G458800 Sobic001G465400 Sobic001G465400 Sobic003G034900--Sobic001G465400 Sobic004G093600 Sobic004G093600 Sobic003G034900--Sobic004G093600 Sobic003G034900--Sobic001G115700 Sobic001G047600 Sobic001G047600 Sobic003G034900--Sobic001G047600 Sobic003G034900--Sobic007G171500 Sobic003G034900--Sobic009G224400 Sobic004G347600 Sobic004G347600 Sobic003G034900--Sobic004G347600 Sobic003G034900--Sobic001G457000 Sobic007G171500--Sobic004G297700 Sobic007G171500--Sobic003G034900 Sobic007G171500--Sobic001G458800 Sobic007G171500--Sobic009G224400 Sobic007G171500--Sobic010G032600 Sobic002G395000 Sobic002G395000 Sobic007G171500--Sobic002G395000 Sobic007G171500--Sobic006G058900 Sobic009G191400 Sobic009G191400 Sobic007G171500--Sobic009G191400 Sobic007G171500--Sobic001G457000 Sobic007G119600--Sobic009G224400 Sobic007G119600--Sobic009G191400 Sobic006G041800 Sobic006G041800 Sobic007G119600--Sobic006G041800 Sobic007G119600--Sobic001G457000 Sobic001G073600 Sobic001G073600 Sobic007G119600--Sobic001G073600 Sobic002G255400 Sobic002G255400 Sobic007G119600--Sobic002G255400 Sobic003G028200 Sobic003G028200 Sobic007G119600--Sobic003G028200 Sobic003G388700 Sobic003G388700 Sobic007G119600--Sobic003G388700 Sobic003G260600 Sobic003G260600 Sobic007G119600--Sobic003G260600 Sobic001G458800--Sobic003G034900 Sobic001G458800--Sobic009G224400 Sobic001G458800--Sobic006G058900 Sobic001G458800--Sobic001G115700 Sobic001G458800--Sobic007G171500 Sobic001G458800--Sobic001G073600 Sobic001G458800--Sobic002G186300 Sobic001G458800--Sobic002G395000 Sobic001G031900 Sobic001G031900 Sobic001G458800--Sobic001G031900 Sobic001G457000--Sobic007G119600 Sobic001G457000--Sobic004G093600 Sobic004G218600 Sobic004G218600 Sobic001G457000--Sobic004G218600 Sobic009G259200 Sobic009G259200 Sobic001G457000--Sobic009G259200 Sobic001G457000--Sobic009G224400 Sobic001G457000--Sobic003G034900 Sobic001G387200 Sobic001G387200 Sobic001G457000--Sobic001G387200 Sobic001G457000--Sobic010G032600 Sobic001G457000--Sobic007G171500 Sobic009G224400--Sobic001G073600 Sobic009G224400--Sobic009G191400 Sobic009G224400--Sobic002G395000 Sobic009G224400--Sobic007G119600 Sobic003G135600 Sobic003G135600 Sobic009G224400--Sobic003G135600 Sobic009G224400--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic009G224400--Sobic004G155100 Sobic009G224400--Sobic003G034900 Sobic002G262200 Sobic002G262200 Sobic009G224400--Sobic002G262200 Sobic006G058900--Sobic001G031900 Sobic006G058900--Sobic001G458800 Sobic006G058900--Sobic004G202100 Sobic006G058900--Sobic002G395000 Sobic006G058900--Sobic007G171500 Sobic002G309500 Sobic002G309500 Sobic006G058900--Sobic002G309500 Sobic004G344800 Sobic004G344800 Sobic006G058900--Sobic004G344800 Sobic006G058900--Sobic003G034900 Sobic003G185500 Sobic003G185500 Sobic006G058900--Sobic003G185500
Octagon: transcription factors


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