Gene annotation
Transcriptome id Sobic.004G093600.1
Synonym Sb04g007700
Functional annotation 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed
UniProt C5XY37
Pfam PF02817 PF00364 PF00198
Panther DB PTHR23151 PTHR23151:SF59
NCBI CDD -
KEGG Orthology K00627; DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G54220 : Dihydrolipoamide acetyltransferase, long form protein
RAP-DB (Rice) LOC_Os07g22720.2 : 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020188 , Zm00025a034560
Brachypodium KQJ92814 , KQK20069 , KQK20068 , PNT76728 , KQK20072 , KQK20073 , KQK20071 , KQK20074 , KQJ92815 , KQJ92812 , KQK20070
Barley HORVU6Hr1G003770.13 , HORVU6Hr1G003770.12 , HORVU6Hr1G003770.11 , HORVU6Hr1G003770.10 , HORVU6Hr1G003770.5 , HORVU6Hr1G003770.4 , HORVU6Hr1G003770.3 , HORVU6Hr1G003770.2 , HORVU6Hr1G003770.1 , HORVU6Hr1G003770.6 , HORVU6Hr1G003770.9 , HORVU6Hr1G003770.8
Wheat TraesCS6D02G024400 , TraesCS6A02G022600 , TraesCS6A02G022600 , TraesCS6B02G028600
Populus PNT43601 , PNT43600


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cDNA sequences
Sobic.004G093600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
2 Sobic.001G387200 expressed protein -
3 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
4 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
5 Sobic.001G457000 ATP synthase gamma chain, putative, expressed K02136: ATPeF1G, ATP5C1, F-type H+-transporting ATPase subunit gamma
6 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
7 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
8 Sobic.006G012700 expressed protein -
9 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
10 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
11 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1
12 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
13 Sobic.003G201500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
14 Sobic.004G256700 ZAC, putative, expressed K12486: stromal membrane-associated protein
15 Sobic.007G171500 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed K00413: CYC1, CYT1, ubiquinol-cytochrome c reductase cytochrome c1 subunit
16 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
18 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
19 Sobic.003G058500 expressed protein -
20 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2


Gene co-expression network
sample Sobic004G093600 Sobic004G093600 Sobic003G129900 Sobic003G129900 Sobic004G093600--Sobic003G129900 Sobic001G387200 Sobic001G387200 Sobic004G093600--Sobic001G387200 Sobic001G047600 Sobic001G047600 Sobic004G093600--Sobic001G047600 Sobic003G034900 Sobic003G034900 Sobic004G093600--Sobic003G034900 Sobic001G457000 Sobic001G457000 Sobic004G093600--Sobic001G457000 Sobic006G120900 Sobic006G120900 Sobic004G093600--Sobic006G120900 Sobic001G378800 Sobic001G378800 Sobic004G093600--Sobic001G378800 Sobic006G012700 Sobic006G012700 Sobic004G093600--Sobic006G012700 Sobic003G260600 Sobic003G260600 Sobic004G093600--Sobic003G260600 Sobic003G129900--Sobic001G387200 Sobic003G129900--Sobic004G093600 Sobic003G129900--Sobic006G120900 Sobic005G019100 Sobic005G019100 Sobic003G129900--Sobic005G019100 Sobic004G173700 Sobic004G173700 Sobic003G129900--Sobic004G173700 Sobic004G256700 Sobic004G256700 Sobic003G129900--Sobic004G256700 Sobic002G420600 Sobic002G420600 Sobic003G129900--Sobic002G420600 Sobic003G129900--Sobic003G034900 Sobic001G518500 Sobic001G518500 Sobic003G129900--Sobic001G518500 Sobic001G387200--Sobic003G129900 Sobic001G387200--Sobic004G093600 Sobic001G387200--Sobic006G120900 Sobic001G387200--Sobic004G173700 Sobic008G018300 Sobic008G018300 Sobic001G387200--Sobic008G018300 Sobic001G387200--Sobic004G256700 Sobic002G255400 Sobic002G255400 Sobic001G387200--Sobic002G255400 Sobic001G387200--Sobic002G420600 Sobic001G387200--Sobic005G019100 Sobic001G047600--Sobic004G093600 Sobic001G047600--Sobic001G378800 Sobic003G058500 Sobic003G058500 Sobic001G047600--Sobic003G058500 Sobic001G047600--Sobic003G034900 Sobic001G047600--Sobic006G012700 SobicK043400 SobicK043400 Sobic001G047600--SobicK043400 Sobic003G156400 Sobic003G156400 Sobic001G047600--Sobic003G156400 Sobic001G465400 Sobic001G465400 Sobic001G047600--Sobic001G465400 Sobic007G118500 Sobic007G118500 Sobic001G047600--Sobic007G118500 Sobic001G458800 Sobic001G458800 Sobic003G034900--Sobic001G458800 Sobic003G034900--Sobic001G465400 Sobic003G034900--Sobic004G093600 Sobic001G115700 Sobic001G115700 Sobic003G034900--Sobic001G115700 Sobic003G034900--Sobic001G047600 Sobic007G171500 Sobic007G171500 Sobic003G034900--Sobic007G171500 Sobic009G224400 Sobic009G224400 Sobic003G034900--Sobic009G224400 Sobic004G347600 Sobic004G347600 Sobic003G034900--Sobic004G347600 Sobic003G034900--Sobic001G457000 Sobic007G119600 Sobic007G119600 Sobic001G457000--Sobic007G119600 Sobic001G457000--Sobic004G093600 Sobic004G218600 Sobic004G218600 Sobic001G457000--Sobic004G218600 Sobic009G259200 Sobic009G259200 Sobic001G457000--Sobic009G259200 Sobic001G457000--Sobic009G224400 Sobic001G457000--Sobic003G034900 Sobic001G457000--Sobic001G387200 Sobic010G032600 Sobic010G032600 Sobic001G457000--Sobic010G032600 Sobic001G457000--Sobic007G171500 Sobic006G120900--Sobic004G173700 Sobic003G234500 Sobic003G234500 Sobic006G120900--Sobic003G234500 Sobic003G089100 Sobic003G089100 Sobic006G120900--Sobic003G089100 Sobic006G120900--Sobic003G129900 Sobic003G380300 Sobic003G380300 Sobic006G120900--Sobic003G380300 Sobic003G212000 Sobic003G212000 Sobic006G120900--Sobic003G212000 Sobic006G120900--Sobic001G387200 Sobic006G120900--Sobic002G420600 Sobic003G137600 Sobic003G137600 Sobic006G120900--Sobic003G137600 Sobic006G232800 Sobic006G232800 Sobic001G378800--Sobic006G232800 Sobic003G394500 Sobic003G394500 Sobic001G378800--Sobic003G394500 Sobic001G378800--Sobic001G047600 Sobic004G077300 Sobic004G077300 Sobic001G378800--Sobic004G077300 Sobic001G356200 Sobic001G356200 Sobic001G378800--Sobic001G356200 Sobic003G372200 Sobic003G372200 Sobic001G378800--Sobic003G372200 Sobic001G424800 Sobic001G424800 Sobic001G378800--Sobic001G424800 Sobic001G378800--Sobic003G260600 Sobic004G350700 Sobic004G350700 Sobic001G378800--Sobic004G350700 Sobic006G012700--Sobic001G465400 Sobic006G012700--Sobic001G378800 Sobic006G012700--Sobic004G093600 Sobic006G012700--Sobic001G047600 Sobic006G012700--Sobic003G156400 Sobic001G378200 Sobic001G378200 Sobic006G012700--Sobic001G378200 Sobic006G012700--Sobic003G034900 Sobic002G395500 Sobic002G395500 Sobic006G012700--Sobic002G395500 Sobic001G389200 Sobic001G389200 Sobic006G012700--Sobic001G389200 Sobic003G260600--Sobic002G255400 Sobic003G201500 Sobic003G201500 Sobic003G260600--Sobic003G201500 Sobic003G260600--Sobic003G089100 Sobic008G132200 Sobic008G132200 Sobic003G260600--Sobic008G132200 Sobic003G260600--Sobic001G378800 Sobic003G260600--Sobic003G372200 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic007G014700 Sobic007G014700 Sobic003G260600--Sobic007G014700
Octagon: transcription factors


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