Gene annotation
Transcriptome id Sobic.001G465400.3,Sobic.001G465400.1,Sobic.001G465400.2
Synonym Sb01g043660
Functional annotation dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed
UniProt A0A1Z5SAU3 , A0A1B6QPT2 , A0A1Z5SAV0
Pfam PF00364 PF00198
Panther DB PTHR23151 PTHR23151:SF8
NCBI CDD KOG0559; Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit)
KEGG Orthology K00658; DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT5G55070 : Dihydrolipoamide succinyltransferase
RAP-DB (Rice) LOC_Os04g32330.1 : dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a011715 , Zm00025a055915
Brachypodium KQK14116
Barley HORVU4Hr1G011850.3 , HORVU4Hr1G011850.2 , HORVU4Hr1G011850.1 , HORVU4Hr1G011850.7 , HORVU4Hr1G011850.6 , HORVU4Hr1G011850.5 , HORVU4Hr1G011850.4 , HORVU4Hr1G011850.9 , HORVU4Hr1G011850.8 , HORVU4Hr1G011850.12 , HORVU4Hr1G011850.11 , HORVU4Hr1G011850.10
Wheat TraesCS2B02G053600 , TraesCS4A02G243500 , TraesCS2A02G041100 , TraesCS2A02G041100 , TraesCS4B02G071300 , TraesCS4D02G070200 , TraesCS2D02G039500 , TraesCS2D02G039500 , TraesCS2D02G039500
Populus -


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cDNA sequences
Sobic.001G465400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
2 Sobic.006G012700 expressed protein -
3 Sobic.001G115700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K03934: NADH dehydrogenase (ubiquinone) Fe-S protein 1
4 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
5 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
6 Sobic.004G000100 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
7 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
8 Sobic.001G008100 expressed protein K17966: transmembrane protein 70, mitochondrial
9 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
10 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
11 Sobic.003G058500 expressed protein -
12 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
13 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
14 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
15 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
16 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
17 Sobic.004G186900 RNA recognition motif containing protein, putative, expressed -
18 Sobic.001G387800 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
19 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
20 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta


Gene co-expression network
sample Sobic001G465400 Sobic001G465400 Sobic003G034900 Sobic003G034900 Sobic001G465400--Sobic003G034900 Sobic006G012700 Sobic006G012700 Sobic001G465400--Sobic006G012700 Sobic001G115700 Sobic001G115700 Sobic001G465400--Sobic001G115700 Sobic001G378200 Sobic001G378200 Sobic001G465400--Sobic001G378200 Sobic004G078700 Sobic004G078700 Sobic001G465400--Sobic004G078700 Sobic004G000100 Sobic004G000100 Sobic001G465400--Sobic004G000100 Sobic001G047600 Sobic001G047600 Sobic001G465400--Sobic001G047600 Sobic001G008100 Sobic001G008100 Sobic001G465400--Sobic001G008100 Sobic004G347600 Sobic004G347600 Sobic001G465400--Sobic004G347600 Sobic001G458800 Sobic001G458800 Sobic003G034900--Sobic001G458800 Sobic003G034900--Sobic001G465400 Sobic004G093600 Sobic004G093600 Sobic003G034900--Sobic004G093600 Sobic003G034900--Sobic001G115700 Sobic003G034900--Sobic001G047600 Sobic007G171500 Sobic007G171500 Sobic003G034900--Sobic007G171500 Sobic009G224400 Sobic009G224400 Sobic003G034900--Sobic009G224400 Sobic003G034900--Sobic004G347600 Sobic001G457000 Sobic001G457000 Sobic003G034900--Sobic001G457000 Sobic006G012700--Sobic001G465400 Sobic001G378800 Sobic001G378800 Sobic006G012700--Sobic001G378800 Sobic006G012700--Sobic004G093600 Sobic006G012700--Sobic001G047600 Sobic003G156400 Sobic003G156400 Sobic006G012700--Sobic003G156400 Sobic006G012700--Sobic001G378200 Sobic006G012700--Sobic003G034900 Sobic002G395500 Sobic002G395500 Sobic006G012700--Sobic002G395500 Sobic001G389200 Sobic001G389200 Sobic006G012700--Sobic001G389200 Sobic001G115700--Sobic001G458800 Sobic001G115700--Sobic003G034900 Sobic001G115700--Sobic001G465400 Sobic008G072200 Sobic008G072200 Sobic001G115700--Sobic008G072200 Sobic001G115700--Sobic004G347600 Sobic005G018800 Sobic005G018800 Sobic001G115700--Sobic005G018800 Sobic009G191400 Sobic009G191400 Sobic001G115700--Sobic009G191400 Sobic003G200800 Sobic003G200800 Sobic001G115700--Sobic003G200800 Sobic002G186300 Sobic002G186300 Sobic001G115700--Sobic002G186300 Sobic001G378200--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic001G378200--Sobic001G112400 Sobic001G378200--Sobic006G012700 Sobic001G378200--Sobic004G078700 Sobic004G039400 Sobic004G039400 Sobic001G378200--Sobic004G039400 Sobic001G443200 Sobic001G443200 Sobic001G378200--Sobic001G443200 Sobic001G378200--Sobic001G008100 Sobic002G262200 Sobic002G262200 Sobic001G378200--Sobic002G262200 Sobic005G207400 Sobic005G207400 Sobic001G378200--Sobic005G207400 Sobic004G078700--Sobic001G389200 Sobic004G078700--Sobic001G465400 Sobic004G100200 Sobic004G100200 Sobic004G078700--Sobic004G100200 Sobic010G223400 Sobic010G223400 Sobic004G078700--Sobic010G223400 Sobic002G355800 Sobic002G355800 Sobic004G078700--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic004G078700--Sobic004G254800 Sobic007G118500 Sobic007G118500 Sobic004G078700--Sobic007G118500 Sobic004G078700--Sobic001G378200 Sobic003G316200 Sobic003G316200 Sobic004G078700--Sobic003G316200 Sobic007G173700 Sobic007G173700 Sobic004G000100--Sobic007G173700 Sobic004G000100--Sobic001G443200 Sobic004G000100--Sobic001G465400 Sobic001G161700 Sobic001G161700 Sobic004G000100--Sobic001G161700 Sobic008G102600 Sobic008G102600 Sobic004G000100--Sobic008G102600 Sobic004G000100--Sobic004G347600 Sobic001G077900 Sobic001G077900 Sobic004G000100--Sobic001G077900 Sobic001G023100 Sobic001G023100 Sobic004G000100--Sobic001G023100 Sobic002G029300 Sobic002G029300 Sobic004G000100--Sobic002G029300 Sobic001G047600--Sobic004G093600 Sobic001G047600--Sobic001G378800 Sobic003G058500 Sobic003G058500 Sobic001G047600--Sobic003G058500 Sobic001G047600--Sobic003G034900 Sobic001G047600--Sobic006G012700 SobicK043400 SobicK043400 Sobic001G047600--SobicK043400 Sobic001G047600--Sobic003G156400 Sobic001G047600--Sobic001G465400 Sobic001G047600--Sobic007G118500 Sobic001G008100--Sobic004G039400 Sobic006G041800 Sobic006G041800 Sobic001G008100--Sobic006G041800 Sobic001G008100--Sobic001G465400 Sobic010G040900 Sobic010G040900 Sobic001G008100--Sobic010G040900 Sobic001G387800 Sobic001G387800 Sobic001G008100--Sobic001G387800 Sobic003G276100 Sobic003G276100 Sobic001G008100--Sobic003G276100 Sobic002G079700 Sobic002G079700 Sobic001G008100--Sobic002G079700 Sobic001G008100--Sobic009G191400 Sobic002G276800 Sobic002G276800 Sobic001G008100--Sobic002G276800 Sobic004G347600--Sobic009G191400 Sobic001G073600 Sobic001G073600 Sobic004G347600--Sobic001G073600 Sobic004G347600--Sobic003G034900 Sobic004G347600--Sobic001G458800 Sobic004G347600--Sobic001G465400 Sobic004G347600--Sobic001G112400 Sobic004G347600--Sobic001G115700 Sobic007G161200 Sobic007G161200 Sobic004G347600--Sobic007G161200 Sobic004G347600--Sobic001G443200
Octagon: transcription factors


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