Gene annotation
Transcriptome id Sobic.003G034900.2
Synonym Sb03g003160, MPPalpha
Functional annotation mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed
UniProt A0A1B6Q140
Pfam PF05193 PF00675
Panther DB PTHR11851 PTHR11851:SF138
NCBI CDD KOG2067; Mitochondrial processing peptidase, alpha subunit
KEGG Orthology K01412; PMPCA, mitochondrial-processing peptidase subunit alpha
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G51980 : Insulinase (Peptidase family M16) protein
RAP-DB (Rice) LOC_Os01g09560.1 : mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a023050
Brachypodium KQK03125
Barley HORVU3Hr1G019540.5 , HORVU3Hr1G019540.2 , HORVU3Hr1G019540.3 , HORVU3Hr1G019540.1
Wheat TraesCS3A02G107500 , TraesCS3A02G107500 , TraesCS3B02G126300 , TraesCS3B02G126300 , TraesCS3B02G126300 , TraesCS3B02G126300
Populus -


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cDNA sequences
Sobic.003G034900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
2 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
3 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
4 Sobic.001G115700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K03934: NADH dehydrogenase (ubiquinone) Fe-S protein 1
5 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
6 Sobic.007G171500 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed K00413: CYC1, CYT1, ubiquinol-cytochrome c reductase cytochrome c1 subunit
7 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
8 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
9 Sobic.001G457000 ATP synthase gamma chain, putative, expressed K02136: ATPeF1G, ATP5C1, F-type H+-transporting ATPase subunit gamma
10 Sobic.002G186300 serine/threonine-protein kinase 16, putative, expressed K08856: serine/threonine kinase 16
11 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
12 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
13 Sobic.006G012700 expressed protein -
14 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
15 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
16 Sobic.004G244000 dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
17 Sobic.001G387200 expressed protein -
18 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
19 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
20 Sobic.004G297700 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A


Gene co-expression network
sample Sobic003G034900 Sobic003G034900 Sobic001G458800 Sobic001G458800 Sobic003G034900--Sobic001G458800 Sobic001G465400 Sobic001G465400 Sobic003G034900--Sobic001G465400 Sobic004G093600 Sobic004G093600 Sobic003G034900--Sobic004G093600 Sobic001G115700 Sobic001G115700 Sobic003G034900--Sobic001G115700 Sobic001G047600 Sobic001G047600 Sobic003G034900--Sobic001G047600 Sobic007G171500 Sobic007G171500 Sobic003G034900--Sobic007G171500 Sobic009G224400 Sobic009G224400 Sobic003G034900--Sobic009G224400 Sobic004G347600 Sobic004G347600 Sobic003G034900--Sobic004G347600 Sobic001G457000 Sobic001G457000 Sobic003G034900--Sobic001G457000 Sobic001G458800--Sobic003G034900 Sobic001G458800--Sobic009G224400 Sobic006G058900 Sobic006G058900 Sobic001G458800--Sobic006G058900 Sobic001G458800--Sobic001G115700 Sobic001G458800--Sobic007G171500 Sobic001G073600 Sobic001G073600 Sobic001G458800--Sobic001G073600 Sobic002G186300 Sobic002G186300 Sobic001G458800--Sobic002G186300 Sobic002G395000 Sobic002G395000 Sobic001G458800--Sobic002G395000 Sobic001G031900 Sobic001G031900 Sobic001G458800--Sobic001G031900 Sobic001G465400--Sobic003G034900 Sobic006G012700 Sobic006G012700 Sobic001G465400--Sobic006G012700 Sobic001G465400--Sobic001G115700 Sobic001G378200 Sobic001G378200 Sobic001G465400--Sobic001G378200 Sobic004G078700 Sobic004G078700 Sobic001G465400--Sobic004G078700 Sobic004G000100 Sobic004G000100 Sobic001G465400--Sobic004G000100 Sobic001G465400--Sobic001G047600 Sobic001G008100 Sobic001G008100 Sobic001G465400--Sobic001G008100 Sobic001G465400--Sobic004G347600 Sobic003G129900 Sobic003G129900 Sobic004G093600--Sobic003G129900 Sobic001G387200 Sobic001G387200 Sobic004G093600--Sobic001G387200 Sobic004G093600--Sobic001G047600 Sobic004G093600--Sobic003G034900 Sobic004G093600--Sobic001G457000 Sobic006G120900 Sobic006G120900 Sobic004G093600--Sobic006G120900 Sobic001G378800 Sobic001G378800 Sobic004G093600--Sobic001G378800 Sobic004G093600--Sobic006G012700 Sobic003G260600 Sobic003G260600 Sobic004G093600--Sobic003G260600 Sobic001G115700--Sobic001G458800 Sobic001G115700--Sobic003G034900 Sobic001G115700--Sobic001G465400 Sobic008G072200 Sobic008G072200 Sobic001G115700--Sobic008G072200 Sobic001G115700--Sobic004G347600 Sobic005G018800 Sobic005G018800 Sobic001G115700--Sobic005G018800 Sobic009G191400 Sobic009G191400 Sobic001G115700--Sobic009G191400 Sobic003G200800 Sobic003G200800 Sobic001G115700--Sobic003G200800 Sobic001G115700--Sobic002G186300 Sobic001G047600--Sobic004G093600 Sobic001G047600--Sobic001G378800 Sobic003G058500 Sobic003G058500 Sobic001G047600--Sobic003G058500 Sobic001G047600--Sobic003G034900 Sobic001G047600--Sobic006G012700 SobicK043400 SobicK043400 Sobic001G047600--SobicK043400 Sobic003G156400 Sobic003G156400 Sobic001G047600--Sobic003G156400 Sobic001G047600--Sobic001G465400 Sobic007G118500 Sobic007G118500 Sobic001G047600--Sobic007G118500 Sobic004G297700 Sobic004G297700 Sobic007G171500--Sobic004G297700 Sobic007G171500--Sobic003G034900 Sobic007G171500--Sobic001G458800 Sobic007G171500--Sobic009G224400 Sobic010G032600 Sobic010G032600 Sobic007G171500--Sobic010G032600 Sobic007G171500--Sobic002G395000 Sobic007G171500--Sobic006G058900 Sobic007G171500--Sobic009G191400 Sobic007G171500--Sobic001G457000 Sobic009G224400--Sobic001G073600 Sobic009G224400--Sobic009G191400 Sobic009G224400--Sobic002G395000 Sobic007G119600 Sobic007G119600 Sobic009G224400--Sobic007G119600 Sobic003G135600 Sobic003G135600 Sobic009G224400--Sobic003G135600 Sobic009G224400--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic009G224400--Sobic004G155100 Sobic009G224400--Sobic003G034900 Sobic002G262200 Sobic002G262200 Sobic009G224400--Sobic002G262200 Sobic004G347600--Sobic009G191400 Sobic004G347600--Sobic001G073600 Sobic004G347600--Sobic003G034900 Sobic004G347600--Sobic001G458800 Sobic004G347600--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic004G347600--Sobic001G112400 Sobic004G347600--Sobic001G115700 Sobic007G161200 Sobic007G161200 Sobic004G347600--Sobic007G161200 Sobic001G443200 Sobic001G443200 Sobic004G347600--Sobic001G443200 Sobic001G457000--Sobic007G119600 Sobic001G457000--Sobic004G093600 Sobic004G218600 Sobic004G218600 Sobic001G457000--Sobic004G218600 Sobic009G259200 Sobic009G259200 Sobic001G457000--Sobic009G259200 Sobic001G457000--Sobic009G224400 Sobic001G457000--Sobic003G034900 Sobic001G457000--Sobic001G387200 Sobic001G457000--Sobic010G032600 Sobic001G457000--Sobic007G171500
Octagon: transcription factors


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