Gene annotation
Transcriptome id Sobic.009G191400.1
Synonym Sb09g025020
Functional annotation NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed
UniProt A0A1B6P999
Pfam PF01257
Panther DB PTHR10371 PTHR10371:SF3
NCBI CDD KOG3196; NADH:ubiquinone oxidoreductase, NDUFV2/24 kD subunit
KEGG Orthology K03943; NADH dehydrogenase (ubiquinone) flavoprotein 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02580 : NADH-ubiquinone oxidoreductase 24 kDa subunit, putative
RAP-DB (Rice) LOC_Os05g43360.1 : NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a044174
Brachypodium KQK05496
Barley HORVU1Hr1G077910.16 , HORVU1Hr1G077910.15 , HORVU1Hr1G077910.14 , HORVU1Hr1G077910.13 , HORVU1Hr1G077910.12 , HORVU1Hr1G077910.11 , HORVU1Hr1G077910.10 , HORVU1Hr1G077910.9 , HORVU1Hr1G077910.8 , HORVU1Hr1G077910.7 , HORVU1Hr1G077910.6 , HORVU1Hr1G077910.5 , HORVU1Hr1G077910.4 , HORVU1Hr1G077910.3 , HORVU1Hr1G077910.2
Wheat TraesCS1A02G326900 , TraesCS1A02G326900 , TraesCS1B02G340300 , TraesCS1B02G340300 , TraesCS1D02G329000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G191400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
2 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
3 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
4 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
5 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
6 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
7 Sobic.002G262200 expressed protein -
8 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
9 Sobic.002G396700 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed K03942: NADH dehydrogenase (ubiquinone) flavoprotein 1
10 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
11 Sobic.001G206700 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
12 Sobic.003G028200 expressed protein -
13 Sobic.007G171500 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed K00413: CYC1, CYT1, ubiquinol-cytochrome c reductase cytochrome c1 subunit
14 Sobic.010G040900 trafficking protein particle complex subunit 4, putative, expressed -
15 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
16 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
17 Sobic.004G155100 uncharacterized protein MJ0304, putative, expressed -
18 Sobic.001G457000 ATP synthase gamma chain, putative, expressed K02136: ATPeF1G, ATP5C1, F-type H+-transporting ATPase subunit gamma
19 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
20 Sobic.001G115700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K03934: NADH dehydrogenase (ubiquinone) Fe-S protein 1


Gene co-expression network
sample Sobic009G191400 Sobic009G191400 Sobic001G073600 Sobic001G073600 Sobic009G191400--Sobic001G073600 Sobic009G224400 Sobic009G224400 Sobic009G191400--Sobic009G224400 Sobic004G347600 Sobic004G347600 Sobic009G191400--Sobic004G347600 Sobic007G119600 Sobic007G119600 Sobic009G191400--Sobic007G119600 Sobic003G135600 Sobic003G135600 Sobic009G191400--Sobic003G135600 Sobic004G344800 Sobic004G344800 Sobic009G191400--Sobic004G344800 Sobic002G262200 Sobic002G262200 Sobic009G191400--Sobic002G262200 Sobic001G458800 Sobic001G458800 Sobic009G191400--Sobic001G458800 Sobic002G396700 Sobic002G396700 Sobic009G191400--Sobic002G396700 Sobic001G073600--Sobic009G191400 Sobic001G073600--Sobic009G224400 Sobic001G073600--Sobic003G135600 Sobic002G395000 Sobic002G395000 Sobic001G073600--Sobic002G395000 Sobic001G073600--Sobic004G344800 Sobic001G073600--Sobic007G119600 Sobic001G073600--Sobic004G347600 Sobic001G073600--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic001G073600--Sobic004G155100 Sobic009G224400--Sobic001G073600 Sobic009G224400--Sobic009G191400 Sobic009G224400--Sobic002G395000 Sobic009G224400--Sobic007G119600 Sobic009G224400--Sobic003G135600 Sobic009G224400--Sobic001G458800 Sobic009G224400--Sobic004G155100 Sobic003G034900 Sobic003G034900 Sobic009G224400--Sobic003G034900 Sobic009G224400--Sobic002G262200 Sobic004G347600--Sobic009G191400 Sobic004G347600--Sobic001G073600 Sobic004G347600--Sobic003G034900 Sobic004G347600--Sobic001G458800 Sobic001G465400 Sobic001G465400 Sobic004G347600--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic004G347600--Sobic001G112400 Sobic001G115700 Sobic001G115700 Sobic004G347600--Sobic001G115700 Sobic007G161200 Sobic007G161200 Sobic004G347600--Sobic007G161200 Sobic001G443200 Sobic001G443200 Sobic004G347600--Sobic001G443200 Sobic007G119600--Sobic009G224400 Sobic007G119600--Sobic009G191400 Sobic006G041800 Sobic006G041800 Sobic007G119600--Sobic006G041800 Sobic001G457000 Sobic001G457000 Sobic007G119600--Sobic001G457000 Sobic007G119600--Sobic001G073600 Sobic002G255400 Sobic002G255400 Sobic007G119600--Sobic002G255400 Sobic003G028200 Sobic003G028200 Sobic007G119600--Sobic003G028200 Sobic003G388700 Sobic003G388700 Sobic007G119600--Sobic003G388700 Sobic003G260600 Sobic003G260600 Sobic007G119600--Sobic003G260600 Sobic003G135600--Sobic004G155100 Sobic003G135600--Sobic002G395000 Sobic003G135600--Sobic001G073600 Sobic003G135600--Sobic009G224400 Sobic002G309700 Sobic002G309700 Sobic003G135600--Sobic002G309700 Sobic003G135600--Sobic009G191400 Sobic001G181500 Sobic001G181500 Sobic003G135600--Sobic001G181500 Sobic009G211900 Sobic009G211900 Sobic003G135600--Sobic009G211900 Sobic004G260200 Sobic004G260200 Sobic003G135600--Sobic004G260200 Sobic004G344800--Sobic001G073600 Sobic004G344800--Sobic003G135600 Sobic004G159000 Sobic004G159000 Sobic004G344800--Sobic004G159000 Sobic001G035400 Sobic001G035400 Sobic004G344800--Sobic001G035400 Sobic004G344800--Sobic009G191400 Sobic004G030000 Sobic004G030000 Sobic004G344800--Sobic004G030000 Sobic004G344800--Sobic002G262200 Sobic004G344800--Sobic002G396700 Sobic001G031900 Sobic001G031900 Sobic004G344800--Sobic001G031900 Sobic002G262200--Sobic004G159000 Sobic002G262200--Sobic009G224400 Sobic002G262200--Sobic002G395000 Sobic002G262200--Sobic003G135600 Sobic002G262200--Sobic004G344800 Sobic002G262200--Sobic001G073600 Sobic002G262200--Sobic001G112400 Sobic007G013900 Sobic007G013900 Sobic002G262200--Sobic007G013900 Sobic002G262200--Sobic009G191400 Sobic001G458800--Sobic003G034900 Sobic001G458800--Sobic009G224400 Sobic006G058900 Sobic006G058900 Sobic001G458800--Sobic006G058900 Sobic001G458800--Sobic001G115700 Sobic007G171500 Sobic007G171500 Sobic001G458800--Sobic007G171500 Sobic001G458800--Sobic001G073600 Sobic002G186300 Sobic002G186300 Sobic001G458800--Sobic002G186300 Sobic001G458800--Sobic002G395000 Sobic001G458800--Sobic001G031900 Sobic002G396700--Sobic004G344800 Sobic002G396700--Sobic009G191400 Sobic002G396700--Sobic007G171500 Sobic002G396700--Sobic001G112400 Sobic002G396700--Sobic001G115700 Sobic009G089700 Sobic009G089700 Sobic002G396700--Sobic009G089700 Sobic002G396700--Sobic001G458800 Sobic002G396700--Sobic002G262200 Sobic002G396700--Sobic001G465400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.