Gene annotation
Transcriptome id Sobic.003G028200.1
Synonym Sb03g002650
Functional annotation expressed protein
UniProt C5XLT2
Pfam -
Panther DB PTHR15853
NCBI CDD KOG0914; Thioredoxin-like protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11640 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os01g10340.1 : expressed protein
MaizeGDB (Corn) Zm00025a035852
Brachypodium KQK03194
Barley HORVU3Hr1G026990.26 , HORVU3Hr1G026990.25 , HORVU3Hr1G026990.15 , HORVU3Hr1G026990.14 , HORVU3Hr1G026990.13 , HORVU3Hr1G026990.12 , HORVU3Hr1G026990.10 , HORVU3Hr1G026990.19 , HORVU3Hr1G026990.18 , HORVU3Hr1G026990.8 , HORVU3Hr1G026990.4
Wheat TraesCS3A02G312900 , TraesCS3B02G159000 , TraesCS3B02G159000 , TraesCS3B02G159000
Populus -


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cDNA sequences
Sobic.003G028200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
2 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
3 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
4 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
5 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
6 Sobic.001G457000 ATP synthase gamma chain, putative, expressed K02136: ATPeF1G, ATP5C1, F-type H+-transporting ATPase subunit gamma
7 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
8 Sobic.009G259200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
9 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
10 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
11 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
12 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
13 Sobic.003G048600 OsGrx_S15.1 - glutaredoxin subgroup II, expressed -
14 Sobic.008G072500 SAM-dependent methyltransferase, putative, expressed K18162: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5
15 Sobic.008G132200 tetratricopeptide repeat domain containing protein, expressed -
16 Sobic.001G282200 ribosomal protein L35, putative, expressed -
17 Sobic.003G049200 NADH-cytochrome b5 reductase, putative, expressed K00326: cytochrome-b5 reductase
18 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
19 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
20 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13


Gene co-expression network
sample Sobic003G028200 Sobic003G028200 Sobic009G224400 Sobic009G224400 Sobic003G028200--Sobic009G224400 Sobic002G255400 Sobic002G255400 Sobic003G028200--Sobic002G255400 Sobic003G260600 Sobic003G260600 Sobic003G028200--Sobic003G260600 Sobic007G119600 Sobic007G119600 Sobic003G028200--Sobic007G119600 Sobic009G191400 Sobic009G191400 Sobic003G028200--Sobic009G191400 Sobic001G457000 Sobic001G457000 Sobic003G028200--Sobic001G457000 Sobic001G073600 Sobic001G073600 Sobic003G028200--Sobic001G073600 Sobic009G259200 Sobic009G259200 Sobic003G028200--Sobic009G259200 Sobic002G352200 Sobic002G352200 Sobic003G028200--Sobic002G352200 Sobic009G224400--Sobic001G073600 Sobic009G224400--Sobic009G191400 Sobic002G395000 Sobic002G395000 Sobic009G224400--Sobic002G395000 Sobic009G224400--Sobic007G119600 Sobic003G135600 Sobic003G135600 Sobic009G224400--Sobic003G135600 Sobic001G458800 Sobic001G458800 Sobic009G224400--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic009G224400--Sobic004G155100 Sobic003G034900 Sobic003G034900 Sobic009G224400--Sobic003G034900 Sobic002G262200 Sobic002G262200 Sobic009G224400--Sobic002G262200 Sobic002G255400--Sobic003G260600 Sobic003G089100 Sobic003G089100 Sobic002G255400--Sobic003G089100 Sobic007G014700 Sobic007G014700 Sobic002G255400--Sobic007G014700 Sobic008G018300 Sobic008G018300 Sobic002G255400--Sobic008G018300 Sobic002G420600 Sobic002G420600 Sobic002G255400--Sobic002G420600 Sobic003G201500 Sobic003G201500 Sobic002G255400--Sobic003G201500 Sobic003G013700 Sobic003G013700 Sobic002G255400--Sobic003G013700 Sobic002G255400--Sobic002G352200 Sobic001G387200 Sobic001G387200 Sobic002G255400--Sobic001G387200 Sobic003G260600--Sobic002G255400 Sobic003G260600--Sobic003G201500 Sobic003G260600--Sobic003G089100 Sobic008G132200 Sobic008G132200 Sobic003G260600--Sobic008G132200 Sobic001G378800 Sobic001G378800 Sobic003G260600--Sobic001G378800 Sobic003G372200 Sobic003G372200 Sobic003G260600--Sobic003G372200 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic003G260600--Sobic007G014700 Sobic007G119600--Sobic009G224400 Sobic007G119600--Sobic009G191400 Sobic006G041800 Sobic006G041800 Sobic007G119600--Sobic006G041800 Sobic007G119600--Sobic001G457000 Sobic007G119600--Sobic001G073600 Sobic007G119600--Sobic002G255400 Sobic007G119600--Sobic003G028200 Sobic003G388700 Sobic003G388700 Sobic007G119600--Sobic003G388700 Sobic007G119600--Sobic003G260600 Sobic009G191400--Sobic001G073600 Sobic009G191400--Sobic009G224400 Sobic004G347600 Sobic004G347600 Sobic009G191400--Sobic004G347600 Sobic009G191400--Sobic007G119600 Sobic009G191400--Sobic003G135600 Sobic004G344800 Sobic004G344800 Sobic009G191400--Sobic004G344800 Sobic009G191400--Sobic002G262200 Sobic009G191400--Sobic001G458800 Sobic002G396700 Sobic002G396700 Sobic009G191400--Sobic002G396700 Sobic001G457000--Sobic007G119600 Sobic004G093600 Sobic004G093600 Sobic001G457000--Sobic004G093600 Sobic004G218600 Sobic004G218600 Sobic001G457000--Sobic004G218600 Sobic001G457000--Sobic009G259200 Sobic001G457000--Sobic009G224400 Sobic001G457000--Sobic003G034900 Sobic001G457000--Sobic001G387200 Sobic010G032600 Sobic010G032600 Sobic001G457000--Sobic010G032600 Sobic007G171500 Sobic007G171500 Sobic001G457000--Sobic007G171500 Sobic001G073600--Sobic009G191400 Sobic001G073600--Sobic009G224400 Sobic001G073600--Sobic003G135600 Sobic001G073600--Sobic002G395000 Sobic001G073600--Sobic004G344800 Sobic001G073600--Sobic007G119600 Sobic001G073600--Sobic004G347600 Sobic001G073600--Sobic001G458800 Sobic001G073600--Sobic004G155100 Sobic009G259200--Sobic001G457000 Sobic009G259200--Sobic009G224400 Sobic009G259200--Sobic003G260600 Sobic009G259200--Sobic007G119600 Sobic009G259200--Sobic003G028200 Sobic009G259200--Sobic002G255400 Sobic009G259200--Sobic003G201500 Sobic004G173700 Sobic004G173700 Sobic009G259200--Sobic004G173700 Sobic009G259200--Sobic003G089100 Sobic002G352200--Sobic002G420600 Sobic003G016300 Sobic003G016300 Sobic002G352200--Sobic003G016300 Sobic002G352200--Sobic008G018300 Sobic002G352200--Sobic002G255400 Sobic002G352200--Sobic004G173700 Sobic002G352200--Sobic003G260600 Sobic002G352200--Sobic009G224400 Sobic002G124900 Sobic002G124900 Sobic002G352200--Sobic002G124900 Sobic002G352200--Sobic001G073600
Octagon: transcription factors


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