Gene annotation
| Transcriptome id | Sobic.008G072500.1 |
|---|---|
| Synonym | Sb08g006400 |
| Functional annotation | SAM-dependent methyltransferase, putative, expressed |
| UniProt | C5YTK7 |
| Pfam | PF08241 |
| Panther DB | PTHR13090 |
| NCBI CDD | KOG2940; Predicted methyltransferase |
| KEGG Orthology | K18162; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 |
| Gene Ontology | GO:0008168; methyltransferase activity GO:0008152metabolic process |
Orthologs (automatic annotation)
| TAIR | AT1G22800 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os12g10200.1 : SAM-dependent methyltransferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a054440 , Zm00025a001117 , Zm00025a058034 , Zm00025a058023 |
| Brachypodium | KQJ91898 |
| Barley | HORVU6Hr1G028940.9 , HORVU6Hr1G028940.8 , HORVU6Hr1G028940.7 , HORVU6Hr1G028940.6 , HORVU6Hr1G028940.5 , HORVU6Hr1G028940.4 , HORVU6Hr1G028940.3 , HORVU6Hr1G028940.2 , HORVU6Hr1G028940.1 , HORVU6Hr1G028910.4 , HORVU6Hr1G028910.1 , HORVU6Hr1G028910.2 , HORVU6Hr1G028940.14 , HORVU6Hr1G028940.13 , HORVU6Hr1G028940.12 , HORVU6Hr1G028940.11 , HORVU6Hr1G028940.10 |
| Wheat | TraesCS3D02G165700 , TraesCS6B02G175400 , TraesCS6A02G147200 , TraesCS6D02G136500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G049200 | NADH-cytochrome b5 reductase, putative, expressed | K00326: cytochrome-b5 reductase |
| 2 | Sobic.003G260600 | ATP synthase, putative, expressed | K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta |
| 3 | Sobic.010G133400 | pantothenate kinase 4, putative, expressed | - |
| 4 | Sobic.001G378800 | fumarate hydratase, mitochondrial precursor, putative, expressed | K01679: E4.2.1.2B, fumC, fumarate hydratase, class II |
| 5 | Sobic.002G193500 | malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed | K01578: malonyl-CoA decarboxylase |
| 6 | Sobic.006G232800 | expressed protein | K17785: IMMT, FCJ1, mitofilin |
| 7 | Sobic.003G048600 | OsGrx_S15.1 - glutaredoxin subgroup II, expressed | - |
| 8 | Sobic.007G118500 | galactosyltransferase family protein, putative, expressed | - |
| 9 | Sobic.010G086300 | chaperone protein dnaJ, putative, expressed | K03686: molecular chaperone DnaJ |
| 10 | Sobic.007G119600 | clathrin adaptor complex small chain domain containing protein, expressed | K12403: AP-4 complex subunit sigma-1 |
| 11 | Sobic.004G284800 | protein kinase, putative, expressed | K08867: WNK, WNK lysine deficient protein kinase |
| 12 | Sobic.002G255400 | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed | K09569: FK506-binding protein 2 |
| 13 | Sobic.003G372200 | AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed | K06276: 3-phosphoinositide dependent protein kinase-1 |
| 14 | Sobic.002G070300 | expressed protein | - |
| 15 | Sobic.001G203600 | PPR repeat domain containing protein, putative, expressed | - |
| 16 | Sobic.001G309200 | fatty acid hydroxylase, putative, expressed | K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase |
| 17 | Sobic.001G457000 | ATP synthase gamma chain, putative, expressed | K02136: ATPeF1G, ATP5C1, F-type H+-transporting ATPase subunit gamma |
| 18 | Sobic.003G166500 | NAD dependent epimerase/dehydratase family protein, putative, expressed | - |
| 19 | Sobic.004G218600 | succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed | K01900: succinyl-CoA synthetase beta subunit |
| 20 | Sobic.007G226800 | -(PubMedID : 26976818)@dicarboxylate transporter 5(PubMedID : 27016024)@citrate transporter, putative, expressed | K03319: divalent anion:Na+ symporter, DASS family |
Gene co-expression network
Octagon: transcription factors
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