Gene annotation
Transcriptome id Sobic.010G133400.1
Synonym Sb10g012720
Functional annotation pantothenate kinase 4, putative, expressed
UniProt C5Z1R2
Pfam PF01937
Panther DB PTHR12280 PTHR12280:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35360 : Uncharacterised conserved protein (UCP030210)
RAP-DB (Rice) LOC_Os06g21980.1 : pantothenate kinase 4, putative, expressed
MaizeGDB (Corn) Zm00025a050656
Brachypodium KQK18462
Barley HORVU2Hr1G126290.3 , HORVU2Hr1G126290.1 , HORVU2Hr1G126290.6 , HORVU2Hr1G126290.4 , HORVU2Hr1G126290.5
Wheat TraesCS7B02G193200 , TraesCS7A02G226400 , TraesCS7D02G228000
Populus -


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cDNA sequences
Sobic.010G133400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G049200 NADH-cytochrome b5 reductase, putative, expressed K00326: cytochrome-b5 reductase
2 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
3 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
4 Sobic.008G072500 SAM-dependent methyltransferase, putative, expressed K18162: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5
5 Sobic.004G263500 DnaK family protein, putative, expressed K09486: hypoxia up-regulated 1
6 Sobic.001G356100 GPI-anchored wall transfer protein 1, putative, expressed K05283: glucosaminylphosphatidylinositol acyltransferase
7 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
8 Sobic.008G171400 phosphonate metabolism protein-related, putative, expressed -
9 Sobic.002G193500 malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed K01578: malonyl-CoA decarboxylase
10 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
11 Sobic.002G395500 ATP12 ATPase, putative, expressed K07556: ATPeAF2, ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2
12 Sobic.009G054600 -(PubMedID : 26976818)@dihydrolipoyl dehydrogenase, mitochondrial precursor, putative, expressed K00382: DLD, lpd, dihydrolipoamide dehydrogenase
13 Sobic.006G012700 expressed protein -
14 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
15 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1
16 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
17 Sobic.002G070300 expressed protein -
18 Sobic.010G065200 expressed protein -
19 Sobic.003G235100 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
20 Sobic.008G168200 expressed protein -


Gene co-expression network
sample Sobic010G133400 Sobic010G133400 Sobic003G049200 Sobic003G049200 Sobic010G133400--Sobic003G049200 Sobic007G118500 Sobic007G118500 Sobic010G133400--Sobic007G118500 Sobic001G378800 Sobic001G378800 Sobic010G133400--Sobic001G378800 Sobic008G072500 Sobic008G072500 Sobic010G133400--Sobic008G072500 Sobic004G263500 Sobic004G263500 Sobic010G133400--Sobic004G263500 Sobic001G356100 Sobic001G356100 Sobic010G133400--Sobic001G356100 Sobic003G394500 Sobic003G394500 Sobic010G133400--Sobic003G394500 Sobic008G171400 Sobic008G171400 Sobic010G133400--Sobic008G171400 Sobic002G193500 Sobic002G193500 Sobic010G133400--Sobic002G193500 Sobic003G049200--Sobic008G072500 Sobic003G049200--Sobic010G133400 Sobic003G049200--Sobic001G378800 Sobic003G260600 Sobic003G260600 Sobic003G049200--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic003G049200--Sobic002G255400 Sobic007G111300 Sobic007G111300 Sobic003G049200--Sobic007G111300 Sobic001G457000 Sobic001G457000 Sobic003G049200--Sobic001G457000 Sobic006G232800 Sobic006G232800 Sobic003G049200--Sobic006G232800 Sobic003G049200--Sobic007G118500 Sobic007G118500--Sobic003G394500 Sobic004G060300 Sobic004G060300 Sobic007G118500--Sobic004G060300 Sobic002G070300 Sobic002G070300 Sobic007G118500--Sobic002G070300 Sobic007G118500--Sobic010G133400 Sobic007G118500--Sobic001G378800 Sobic007G118500--Sobic006G232800 Sobic001G455000 Sobic001G455000 Sobic007G118500--Sobic001G455000 Sobic007G118500--Sobic001G356100 Sobic007G118500--Sobic008G171400 Sobic001G378800--Sobic006G232800 Sobic001G378800--Sobic003G394500 Sobic001G047600 Sobic001G047600 Sobic001G378800--Sobic001G047600 Sobic004G077300 Sobic004G077300 Sobic001G378800--Sobic004G077300 Sobic001G356200 Sobic001G356200 Sobic001G378800--Sobic001G356200 Sobic003G372200 Sobic003G372200 Sobic001G378800--Sobic003G372200 Sobic001G424800 Sobic001G424800 Sobic001G378800--Sobic001G424800 Sobic001G378800--Sobic003G260600 Sobic004G350700 Sobic004G350700 Sobic001G378800--Sobic004G350700 Sobic008G072500--Sobic003G049200 Sobic008G072500--Sobic003G260600 Sobic008G072500--Sobic010G133400 Sobic008G072500--Sobic001G378800 Sobic008G072500--Sobic002G193500 Sobic008G072500--Sobic006G232800 Sobic003G048600 Sobic003G048600 Sobic008G072500--Sobic003G048600 Sobic008G072500--Sobic007G118500 Sobic010G086300 Sobic010G086300 Sobic008G072500--Sobic010G086300 Sobic004G263500--Sobic001G356100 Sobic006G060000 Sobic006G060000 Sobic004G263500--Sobic006G060000 Sobic004G263500--Sobic003G394500 Sobic008G055500 Sobic008G055500 Sobic004G263500--Sobic008G055500 Sobic004G263500--Sobic001G378800 Sobic004G263500--Sobic010G133400 Sobic004G263500--Sobic004G350700 Sobic004G263500--Sobic007G118500 Sobic001G389200 Sobic001G389200 Sobic004G263500--Sobic001G389200 Sobic001G356100--Sobic004G263500 Sobic001G356100--Sobic007G118500 Sobic001G356100--Sobic003G394500 Sobic001G356100--Sobic001G455000 Sobic001G356100--Sobic006G232800 Sobic001G356100--Sobic006G060000 Sobic001G356100--Sobic004G350700 Sobic001G114200 Sobic001G114200 Sobic001G356100--Sobic001G114200 Sobic001G356100--Sobic010G133400 Sobic003G117800 Sobic003G117800 Sobic003G394500--Sobic003G117800 Sobic001G385000 Sobic001G385000 Sobic003G394500--Sobic001G385000 Sobic003G394500--Sobic004G350700 Sobic003G394500--Sobic001G378800 Sobic003G394500--Sobic007G118500 Sobic003G190200 Sobic003G190200 Sobic003G394500--Sobic003G190200 Sobic003G394500--Sobic006G232800 Sobic007G030100 Sobic007G030100 Sobic003G394500--Sobic007G030100 Sobic003G394500--Sobic001G424800 Sobic008G171400--Sobic001G389200 Sobic008G171400--Sobic007G118500 Sobic003G202100 Sobic003G202100 Sobic008G171400--Sobic003G202100 Sobic001G304000 Sobic001G304000 Sobic008G171400--Sobic001G304000 Sobic008G171400--Sobic010G133400 Sobic003G156400 Sobic003G156400 Sobic008G171400--Sobic003G156400 Sobic001G205100 Sobic001G205100 Sobic008G171400--Sobic001G205100 Sobic009G260700 Sobic009G260700 Sobic008G171400--Sobic009G260700 Sobic008G168200 Sobic008G168200 Sobic008G171400--Sobic008G168200 Sobic007G086600 Sobic007G086600 Sobic002G193500--Sobic007G086600 Sobic002G193500--Sobic007G111300 Sobic001G117900 Sobic001G117900 Sobic002G193500--Sobic001G117900 Sobic002G392400 Sobic002G392400 Sobic002G193500--Sobic002G392400 Sobic002G193500--Sobic006G232800 Sobic002G193500--Sobic008G072500 Sobic002G308000 Sobic002G308000 Sobic002G193500--Sobic002G308000 Sobic002G201700 Sobic002G201700 Sobic002G193500--Sobic002G201700 Sobic003G004800 Sobic003G004800 Sobic002G193500--Sobic003G004800
Octagon: transcription factors


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