Gene annotation
Transcriptome id Sobic.002G193500.1
Synonym Sb02g024040
Functional annotation malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed
UniProt A0A1W0W534
Pfam PF05292
Panther DB PTHR28641 PTHR28641:SF1
NCBI CDD KOG3018; Malonyl-CoA decarboxylase
KEGG Orthology K01578; malonyl-CoA decarboxylase
Gene Ontology GO:0006633; fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT4G04320 : malonyl-CoA decarboxylase family protein
RAP-DB (Rice) LOC_Os09g23070.2 : malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a013855
Brachypodium PNT64512 , KQJ90131 , KQJ90130
Barley HORVU5Hr1G060110.17 , HORVU5Hr1G060110.16 , HORVU5Hr1G060110.15 , HORVU5Hr1G060110.14 , HORVU5Hr1G060110.13 , HORVU5Hr1G060110.12 , HORVU5Hr1G060110.11 , HORVU5Hr1G060110.10 , HORVU5Hr1G060110.19 , HORVU5Hr1G060110.18 , HORVU5Hr1G060110.9 , HORVU5Hr1G060110.8 , HORVU5Hr1G060110.7 , HORVU5Hr1G060110.6 , HORVU5Hr1G060110.5 , HORVU5Hr1G060110.4 , HORVU5Hr1G060110.3 , HORVU5Hr1G060110.2 , HORVU5Hr1G060110.1 , HORVU5Hr1G060110.20
Wheat TraesCS5A02G202500 , TraesCS5A02G202500 , TraesCS5D02G208800 , TraesCS5D02G208800 , TraesCS5B02G201000 , TraesCS5B02G201000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
2 Sobic.007G111300 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
3 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
4 Sobic.002G392400 expressed protein -
5 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
6 Sobic.008G072500 SAM-dependent methyltransferase, putative, expressed K18162: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5
7 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
8 Sobic.002G201700 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
9 Sobic.003G004800 ATP binding protein, putative, expressed -
10 Sobic.004G198300 expressed protein -
11 Sobic.002G167100 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
12 Sobic.009G025700 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
13 Sobic.010G133400 pantothenate kinase 4, putative, expressed -
14 Sobic.004G026600 - -
15 Sobic.003G049200 NADH-cytochrome b5 reductase, putative, expressed K00326: cytochrome-b5 reductase
16 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
17 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
18 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1
19 Sobic.004G213400 ATP8, putative, expressed -
20 Sobic.010G086300 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ


Gene co-expression network
sample Sobic002G193500 Sobic002G193500 Sobic007G086600 Sobic007G086600 Sobic002G193500--Sobic007G086600 Sobic007G111300 Sobic007G111300 Sobic002G193500--Sobic007G111300 Sobic001G117900 Sobic001G117900 Sobic002G193500--Sobic001G117900 Sobic002G392400 Sobic002G392400 Sobic002G193500--Sobic002G392400 Sobic006G232800 Sobic006G232800 Sobic002G193500--Sobic006G232800 Sobic008G072500 Sobic008G072500 Sobic002G193500--Sobic008G072500 Sobic002G308000 Sobic002G308000 Sobic002G193500--Sobic002G308000 Sobic002G201700 Sobic002G201700 Sobic002G193500--Sobic002G201700 Sobic003G004800 Sobic003G004800 Sobic002G193500--Sobic003G004800 Sobic007G086600--Sobic003G004800 Sobic007G086600--Sobic001G117900 Sobic005G048600 Sobic005G048600 Sobic007G086600--Sobic005G048600 Sobic003G293400 Sobic003G293400 Sobic007G086600--Sobic003G293400 Sobic003G022000 Sobic003G022000 Sobic007G086600--Sobic003G022000 Sobic002G348400 Sobic002G348400 Sobic007G086600--Sobic002G348400 Sobic001G433600 Sobic001G433600 Sobic007G086600--Sobic001G433600 Sobic007G086600--Sobic002G193500 Sobic009G201000 Sobic009G201000 Sobic007G086600--Sobic009G201000 Sobic003G159700 Sobic003G159700 Sobic007G111300--Sobic003G159700 Sobic007G111300--Sobic002G308000 Sobic007G111300--Sobic002G193500 Sobic010G182000 Sobic010G182000 Sobic007G111300--Sobic010G182000 Sobic008G104000 Sobic008G104000 Sobic007G111300--Sobic008G104000 Sobic003G049200 Sobic003G049200 Sobic007G111300--Sobic003G049200 Sobic007G111300--Sobic002G392400 Sobic002G070300 Sobic002G070300 Sobic007G111300--Sobic002G070300 Sobic003G423700 Sobic003G423700 Sobic007G111300--Sobic003G423700 Sobic001G117900--Sobic002G308000 Sobic001G117900--Sobic001G433600 Sobic001G117900--Sobic002G392400 Sobic001G117900--Sobic007G086600 Sobic005G060100 Sobic005G060100 Sobic001G117900--Sobic005G060100 Sobic007G105700 Sobic007G105700 Sobic001G117900--Sobic007G105700 Sobic001G117900--Sobic002G348400 Sobic009G025700 Sobic009G025700 Sobic001G117900--Sobic009G025700 Sobic001G117900--Sobic003G004800 Sobic002G392400--Sobic007G105700 Sobic002G392400--Sobic002G308000 Sobic002G392400--Sobic001G117900 Sobic002G392400--Sobic002G348400 Sobic002G313100 Sobic002G313100 Sobic002G392400--Sobic002G313100 Sobic002G392400--Sobic003G293400 Sobic001G131900 Sobic001G131900 Sobic002G392400--Sobic001G131900 Sobic002G392400--Sobic006G232800 Sobic010G153400 Sobic010G153400 Sobic002G392400--Sobic010G153400 Sobic001G378800 Sobic001G378800 Sobic006G232800--Sobic001G378800 Sobic001G385000 Sobic001G385000 Sobic006G232800--Sobic001G385000 Sobic003G394500 Sobic003G394500 Sobic006G232800--Sobic003G394500 Sobic001G149000 Sobic001G149000 Sobic006G232800--Sobic001G149000 Sobic010G086300 Sobic010G086300 Sobic006G232800--Sobic010G086300 Sobic001G280500 Sobic001G280500 Sobic006G232800--Sobic001G280500 Sobic006G232800--Sobic002G313100 Sobic006G232800--Sobic002G392400 Sobic006G265800 Sobic006G265800 Sobic006G232800--Sobic006G265800 Sobic008G072500--Sobic003G049200 Sobic003G260600 Sobic003G260600 Sobic008G072500--Sobic003G260600 Sobic010G133400 Sobic010G133400 Sobic008G072500--Sobic010G133400 Sobic008G072500--Sobic001G378800 Sobic008G072500--Sobic002G193500 Sobic008G072500--Sobic006G232800 Sobic003G048600 Sobic003G048600 Sobic008G072500--Sobic003G048600 Sobic007G118500 Sobic007G118500 Sobic008G072500--Sobic007G118500 Sobic008G072500--Sobic010G086300 Sobic002G308000--Sobic002G392400 Sobic002G308000--Sobic007G105700 Sobic002G308000--Sobic001G117900 Sobic002G308000--Sobic001G433600 Sobic002G308000--Sobic003G293400 Sobic010G253200 Sobic010G253200 Sobic002G308000--Sobic010G253200 Sobic002G308000--Sobic001G131900 Sobic002G308000--Sobic007G111300 Sobic002G192900 Sobic002G192900 Sobic002G308000--Sobic002G192900 Sobic002G167100 Sobic002G167100 Sobic002G201700--Sobic002G167100 Sobic002G201700--Sobic009G025700 Sobic007G192500 Sobic007G192500 Sobic002G201700--Sobic007G192500 Sobic003G013700 Sobic003G013700 Sobic002G201700--Sobic003G013700 Sobic004G261800 Sobic004G261800 Sobic002G201700--Sobic004G261800 Sobic009G042000 Sobic009G042000 Sobic002G201700--Sobic009G042000 Sobic002G201700--Sobic003G022000 Sobic002G201700--Sobic010G253200 Sobic004G284800 Sobic004G284800 Sobic002G201700--Sobic004G284800 Sobic003G004800--Sobic007G086600 Sobic003G004800--Sobic006G265800 Sobic001G385300 Sobic001G385300 Sobic003G004800--Sobic001G385300 Sobic001G076600 Sobic001G076600 Sobic003G004800--Sobic001G076600 Sobic003G004800--Sobic003G293400 Sobic003G004800--Sobic010G153400 Sobic001G308500 Sobic001G308500 Sobic003G004800--Sobic001G308500 Sobic003G004800--Sobic001G117900 Sobic003G004800--Sobic005G060100
Octagon: transcription factors


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