Gene annotation
Transcriptome id Sobic.004G026600.2
Synonym
Functional annotation -
UniProt A0A1Z5RKK9
Pfam PF00161
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0017148; negative regulation of translation


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
2 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
3 Sobic.009G025700 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
4 Sobic.004G198300 expressed protein -
5 Sobic.009G220700 - -
6 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
7 Sobic.009G042000 expressed protein -
8 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
9 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
10 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
11 Sobic.003G423700 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
12 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
13 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
14 Sobic.001G380700 bZIP transcription factor family protein, putative, expressed -
15 Sobic.003G004800 ATP binding protein, putative, expressed -
16 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
17 Sobic.010G253200 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
18 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
19 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
20 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein


Gene co-expression network
sample Sobic004G026600 Sobic004G026600 Sobic003G293400 Sobic003G293400 Sobic004G026600--Sobic003G293400 Sobic004G298600 Sobic004G298600 Sobic004G026600--Sobic004G298600 Sobic009G025700 Sobic009G025700 Sobic004G026600--Sobic009G025700 Sobic004G198300 Sobic004G198300 Sobic004G026600--Sobic004G198300 Sobic009G220700 Sobic009G220700 Sobic004G026600--Sobic009G220700 Sobic002G308000 Sobic002G308000 Sobic004G026600--Sobic002G308000 Sobic009G042000 Sobic009G042000 Sobic004G026600--Sobic009G042000 Sobic001G131900 Sobic001G131900 Sobic004G026600--Sobic001G131900 Sobic006G265800 Sobic006G265800 Sobic004G026600--Sobic006G265800 Sobic003G293400--Sobic001G131900 Sobic003G352900 Sobic003G352900 Sobic003G293400--Sobic003G352900 Sobic003G293400--Sobic004G198300 Sobic001G076600 Sobic001G076600 Sobic003G293400--Sobic001G076600 Sobic002G420100 Sobic002G420100 Sobic003G293400--Sobic002G420100 Sobic004G038400 Sobic004G038400 Sobic003G293400--Sobic004G038400 Sobic003G293400--Sobic004G026600 Sobic003G293400--Sobic004G298600 Sobic007G144100 Sobic007G144100 Sobic003G293400--Sobic007G144100 Sobic001G385300 Sobic001G385300 Sobic004G298600--Sobic001G385300 Sobic004G298600--Sobic001G131900 Sobic004G298600--Sobic003G293400 Sobic004G298600--Sobic004G026600 Sobic005G060100 Sobic005G060100 Sobic004G298600--Sobic005G060100 Sobic001G308500 Sobic001G308500 Sobic004G298600--Sobic001G308500 Sobic001G433600 Sobic001G433600 Sobic004G298600--Sobic001G433600 Sobic007G105700 Sobic007G105700 Sobic004G298600--Sobic007G105700 Sobic004G298600--Sobic003G352900 Sobic009G025700--Sobic009G220700 Sobic002G201700 Sobic002G201700 Sobic009G025700--Sobic002G201700 Sobic002G167100 Sobic002G167100 Sobic009G025700--Sobic002G167100 Sobic002G362500 Sobic002G362500 Sobic009G025700--Sobic002G362500 Sobic006G050100 Sobic006G050100 Sobic009G025700--Sobic006G050100 Sobic009G163100 Sobic009G163100 Sobic009G025700--Sobic009G163100 Sobic009G025700--Sobic004G026600 Sobic002G309100 Sobic002G309100 Sobic009G025700--Sobic002G309100 Sobic008G156600 Sobic008G156600 Sobic009G025700--Sobic008G156600 Sobic004G198300--Sobic003G293400 Sobic004G198300--Sobic004G026600 Sobic007G086600 Sobic007G086600 Sobic004G198300--Sobic007G086600 Sobic010G255400 Sobic010G255400 Sobic004G198300--Sobic010G255400 Sobic005G067966 Sobic005G067966 Sobic004G198300--Sobic005G067966 Sobic004G198300--Sobic002G308000 Sobic002G313100 Sobic002G313100 Sobic004G198300--Sobic002G313100 Sobic002G392400 Sobic002G392400 Sobic004G198300--Sobic002G392400 Sobic005G087300 Sobic005G087300 Sobic004G198300--Sobic005G087300 Sobic009G220700--Sobic008G156600 Sobic009G220700--Sobic009G163100 Sobic001G072000 Sobic001G072000 Sobic009G220700--Sobic001G072000 Sobic003G217800 Sobic003G217800 Sobic009G220700--Sobic003G217800 Sobic001G322400 Sobic001G322400 Sobic009G220700--Sobic001G322400 Sobic001G485700 Sobic001G485700 Sobic009G220700--Sobic001G485700 Sobic010G073900 Sobic010G073900 Sobic009G220700--Sobic010G073900 Sobic009G220700--Sobic003G352900 Sobic009G220700--Sobic009G025700 Sobic002G308000--Sobic002G392400 Sobic002G308000--Sobic007G105700 Sobic001G117900 Sobic001G117900 Sobic002G308000--Sobic001G117900 Sobic002G308000--Sobic001G433600 Sobic002G308000--Sobic003G293400 Sobic010G253200 Sobic010G253200 Sobic002G308000--Sobic010G253200 Sobic002G308000--Sobic001G131900 Sobic007G111300 Sobic007G111300 Sobic002G308000--Sobic007G111300 Sobic002G192900 Sobic002G192900 Sobic002G308000--Sobic002G192900 Sobic007G151500 Sobic007G151500 Sobic009G042000--Sobic007G151500 Sobic009G042000--Sobic010G253200 Sobic009G042000--Sobic003G293400 Sobic004G241300 Sobic004G241300 Sobic009G042000--Sobic004G241300 Sobic009G042000--Sobic002G201700 Sobic009G042000--Sobic008G156600 Sobic009G042000--Sobic002G420100 Sobic009G042000--Sobic009G025700 Sobic003G423700 Sobic003G423700 Sobic009G042000--Sobic003G423700 Sobic001G131900--Sobic003G293400 Sobic001G131900--Sobic003G352900 Sobic001G131900--Sobic004G038400 Sobic001G131900--Sobic001G076600 Sobic001G131900--Sobic001G385300 Sobic005G045800 Sobic005G045800 Sobic001G131900--Sobic005G045800 Sobic001G131900--Sobic004G298600 Sobic001G131900--Sobic002G420100 Sobic001G131900--Sobic007G144100 Sobic001G384200 Sobic001G384200 Sobic006G265800--Sobic001G384200 Sobic006G134500 Sobic006G134500 Sobic006G265800--Sobic006G134500 Sobic001G400000 Sobic001G400000 Sobic006G265800--Sobic001G400000 Sobic006G265800--Sobic009G163100 Sobic009G201000 Sobic009G201000 Sobic006G265800--Sobic009G201000 Sobic003G024100 Sobic003G024100 Sobic006G265800--Sobic003G024100 Sobic006G265800--Sobic008G156600 Sobic003G244400 Sobic003G244400 Sobic006G265800--Sobic003G244400 Sobic008G007600 Sobic008G007600 Sobic006G265800--Sobic008G007600
Octagon: transcription factors


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