Gene annotation
Transcriptome id Sobic.009G042000.2,Sobic.009G042000.1
Synonym Sb09g003520
Functional annotation expressed protein
UniProt A0A1B6P6S9 , C5Z010
Pfam -
Panther DB PTHR23196
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21480 : BRCT domain-containing DNA repair protein
RAP-DB (Rice) LOC_Os05g05440.1 : expressed protein
MaizeGDB (Corn) Zm00025a038091 , Zm00025a055391
Brachypodium PNT71837 , KQK07555
Barley HORVU1Hr1G019640.22 , HORVU1Hr1G019640.23 , HORVU1Hr1G019640.20 , HORVU1Hr1G019640.21 , HORVU1Hr1G019640.26 , HORVU1Hr1G019640.25 , HORVU1Hr1G019640.9 , HORVU1Hr1G019640.8 , HORVU1Hr1G019640.3 , HORVU1Hr1G019640.2 , HORVU1Hr1G019640.1 , HORVU1Hr1G019640.7 , HORVU1Hr1G019640.6 , HORVU1Hr1G019640.5 , HORVU1Hr1G019640.4 , HORVU1Hr1G019640.27 , HORVU1Hr1G019640.24 , HORVU1Hr1G019640.19 , HORVU1Hr1G019640.18 , HORVU1Hr1G019640.13 , HORVU1Hr1G019640.12 , HORVU1Hr1G019640.11 , HORVU1Hr1G019640.10 , HORVU1Hr1G019640.17 , HORVU1Hr1G019640.16 , HORVU1Hr1G019640.15 , HORVU1Hr1G019640.14
Wheat TraesCS1D02G091100 , TraesCS1D02G091100 , TraesCS1D02G091100 , TraesCS1D02G091100 , TraesCS1A02G109400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G151500 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
2 Sobic.010G253200 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
3 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
4 Sobic.004G241300 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
5 Sobic.002G201700 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
6 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
7 Sobic.002G420100 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
8 Sobic.009G025700 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
9 Sobic.003G423700 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
10 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
11 Sobic.009G220700 - -
12 Sobic.001G400000 NAD dependent epimerase/dehydratase family protein, putative, expressed K12448: UXE, UDP-arabinose 4-epimerase
13 Sobic.004G026600 - -
14 Sobic.002G167100 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
15 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
16 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
17 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
18 Sobic.005G020600 Mad3/BUB1 homology region 1 domain containing protein, expressed -
19 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
20 Sobic.007G102000 formin-like protein 13, putative, expressed -


Gene co-expression network
sample Sobic009G042000 Sobic009G042000 Sobic007G151500 Sobic007G151500 Sobic009G042000--Sobic007G151500 Sobic010G253200 Sobic010G253200 Sobic009G042000--Sobic010G253200 Sobic003G293400 Sobic003G293400 Sobic009G042000--Sobic003G293400 Sobic004G241300 Sobic004G241300 Sobic009G042000--Sobic004G241300 Sobic002G201700 Sobic002G201700 Sobic009G042000--Sobic002G201700 Sobic008G156600 Sobic008G156600 Sobic009G042000--Sobic008G156600 Sobic002G420100 Sobic002G420100 Sobic009G042000--Sobic002G420100 Sobic009G025700 Sobic009G025700 Sobic009G042000--Sobic009G025700 Sobic003G423700 Sobic003G423700 Sobic009G042000--Sobic003G423700 Sobic007G151500--Sobic009G042000 Sobic003G293100 Sobic003G293100 Sobic007G151500--Sobic003G293100 Sobic007G151500--Sobic008G156600 Sobic005G020600 Sobic005G020600 Sobic007G151500--Sobic005G020600 Sobic007G151500--Sobic002G420100 Sobic007G151500--Sobic004G241300 Sobic001G072000 Sobic001G072000 Sobic007G151500--Sobic001G072000 Sobic009G163100 Sobic009G163100 Sobic007G151500--Sobic009G163100 Sobic009G087100 Sobic009G087100 Sobic007G151500--Sobic009G087100 Sobic010G253200--Sobic002G420100 Sobic010G253200--Sobic004G241300 Sobic010G253200--Sobic003G423700 Sobic008G104000 Sobic008G104000 Sobic010G253200--Sobic008G104000 Sobic010G253200--Sobic009G042000 Sobic002G186200 Sobic002G186200 Sobic010G253200--Sobic002G186200 Sobic004G261800 Sobic004G261800 Sobic010G253200--Sobic004G261800 Sobic008G073500 Sobic008G073500 Sobic010G253200--Sobic008G073500 Sobic002G308000 Sobic002G308000 Sobic010G253200--Sobic002G308000 Sobic001G131900 Sobic001G131900 Sobic003G293400--Sobic001G131900 Sobic003G352900 Sobic003G352900 Sobic003G293400--Sobic003G352900 Sobic004G198300 Sobic004G198300 Sobic003G293400--Sobic004G198300 Sobic001G076600 Sobic001G076600 Sobic003G293400--Sobic001G076600 Sobic003G293400--Sobic002G420100 Sobic004G038400 Sobic004G038400 Sobic003G293400--Sobic004G038400 Sobic004G026600 Sobic004G026600 Sobic003G293400--Sobic004G026600 Sobic004G298600 Sobic004G298600 Sobic003G293400--Sobic004G298600 Sobic007G144100 Sobic007G144100 Sobic003G293400--Sobic007G144100 Sobic008G171900 Sobic008G171900 Sobic004G241300--Sobic008G171900 Sobic004G241300--Sobic008G156600 Sobic004G241300--Sobic009G163100 Sobic004G241300--Sobic003G423700 Sobic001G435700 Sobic001G435700 Sobic004G241300--Sobic001G435700 Sobic004G241300--Sobic005G020600 Sobic004G241300--Sobic002G420100 Sobic004G241300--Sobic010G253200 Sobic002G172401 Sobic002G172401 Sobic004G241300--Sobic002G172401 Sobic002G167100 Sobic002G167100 Sobic002G201700--Sobic002G167100 Sobic002G201700--Sobic009G025700 Sobic007G192500 Sobic007G192500 Sobic002G201700--Sobic007G192500 Sobic003G013700 Sobic003G013700 Sobic002G201700--Sobic003G013700 Sobic002G201700--Sobic004G261800 Sobic002G201700--Sobic009G042000 Sobic003G022000 Sobic003G022000 Sobic002G201700--Sobic003G022000 Sobic002G201700--Sobic010G253200 Sobic004G284800 Sobic004G284800 Sobic002G201700--Sobic004G284800 Sobic008G156600--Sobic009G163100 Sobic005G050400 Sobic005G050400 Sobic008G156600--Sobic005G050400 Sobic008G156600--Sobic001G072000 Sobic001G112600 Sobic001G112600 Sobic008G156600--Sobic001G112600 Sobic008G156600--Sobic005G020600 Sobic008G156600--Sobic008G171900 Sobic008G156600--Sobic004G241300 Sobic004G007400 Sobic004G007400 Sobic008G156600--Sobic004G007400 Sobic001G322400 Sobic001G322400 Sobic008G156600--Sobic001G322400 Sobic002G420100--Sobic010G253200 Sobic010G182000 Sobic010G182000 Sobic002G420100--Sobic010G182000 Sobic002G420100--Sobic004G241300 Sobic002G420100--Sobic003G423700 Sobic002G420100--Sobic008G156600 Sobic002G420100--Sobic003G293400 Sobic002G420100--Sobic001G131900 Sobic001G400000 Sobic001G400000 Sobic002G420100--Sobic001G400000 Sobic002G420100--Sobic008G104000 Sobic009G220700 Sobic009G220700 Sobic009G025700--Sobic009G220700 Sobic009G025700--Sobic002G201700 Sobic009G025700--Sobic002G167100 Sobic002G362500 Sobic002G362500 Sobic009G025700--Sobic002G362500 Sobic006G050100 Sobic006G050100 Sobic009G025700--Sobic006G050100 Sobic009G025700--Sobic009G163100 Sobic009G025700--Sobic004G026600 Sobic002G309100 Sobic002G309100 Sobic009G025700--Sobic002G309100 Sobic009G025700--Sobic008G156600 Sobic001G126800 Sobic001G126800 Sobic003G423700--Sobic001G126800 Sobic003G423700--Sobic004G241300 Sobic003G423700--Sobic008G104000 Sobic003G423700--Sobic008G156600 Sobic003G423700--Sobic002G420100 Sobic003G423700--Sobic009G163100 Sobic003G423700--Sobic010G182000 Sobic003G423700--Sobic008G171900 Sobic003G423700--Sobic010G253200
Octagon: transcription factors


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