Gene annotation
Transcriptome id Sobic.001G380700.3,Sobic.001G380700.1,Sobic.001G380700.2
Synonym
Functional annotation bZIP transcription factor family protein, putative, expressed
UniProt A0A1B6QNC4
Pfam PF00170
Panther DB PTHR13690 PTHR13690:SF84
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G40620 : Basic-leucine zipper (bZIP) transcription factor family protein
RAP-DB (Rice) LOC_Os03g21800.2,LOC_Os03g21800.1 : bZIP transcription factor family protein, putative, expressed
MaizeGDB (Corn) Zm00025a015443 , Zm00025a052423 , Zm00025a002353 , Zm00025a049157
Brachypodium KQK21797 , KQK14630
Barley HORVU4Hr1G050190.5 , HORVU4Hr1G050190.4 , HORVU4Hr1G050190.1 , HORVU4Hr1G050190.3 , HORVU4Hr1G050190.2
Wheat TraesCS2B02G122700 , TraesCS4A02G135600 , TraesCS4A02G135600 , TraesCS4B02G169600 , TraesCS4B02G169600 , TraesCS4D02G171700 , TraesCS4D02G171700 , TraesCS2D02G105400 , TraesCS2D02G105400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
2 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
3 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
4 Sobic.009G214500 IQ calmodulin-binding motif domain containing protein, expressed -
5 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
6 Sobic.001G433600 - -
7 Sobic.006G189000 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
8 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
9 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
10 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
11 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
12 Sobic.002G309100 phosphate-induced protein 1 conserved region domain containing protein, expressed -
13 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
14 Sobic.005G060100 growth regulator related protein, putative, expressed -
15 Sobic.009G025700 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
16 Sobic.001G308500 glycosyltransferase family protein 1, putative, expressed -
17 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
18 Sobic.007G102000 formin-like protein 13, putative, expressed -
19 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
20 Sobic.005G020600 Mad3/BUB1 homology region 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G380700 Sobic001G380700 Sobic001G385300 Sobic001G385300 Sobic001G380700--Sobic001G385300 Sobic001G131900 Sobic001G131900 Sobic001G380700--Sobic001G131900 Sobic004G298600 Sobic004G298600 Sobic001G380700--Sobic004G298600 Sobic009G214500 Sobic009G214500 Sobic001G380700--Sobic009G214500 Sobic007G105700 Sobic007G105700 Sobic001G380700--Sobic007G105700 Sobic001G433600 Sobic001G433600 Sobic001G380700--Sobic001G433600 Sobic006G189000 Sobic006G189000 Sobic001G380700--Sobic006G189000 Sobic003G376900 Sobic003G376900 Sobic001G380700--Sobic003G376900 Sobic003G293400 Sobic003G293400 Sobic001G380700--Sobic003G293400 Sobic001G385300--Sobic003G376900 Sobic002G299500 Sobic002G299500 Sobic001G385300--Sobic002G299500 Sobic003G352900 Sobic003G352900 Sobic001G385300--Sobic003G352900 Sobic009G163100 Sobic009G163100 Sobic001G385300--Sobic009G163100 Sobic008G171900 Sobic008G171900 Sobic001G385300--Sobic008G171900 Sobic005G045800 Sobic005G045800 Sobic001G385300--Sobic005G045800 Sobic007G141600 Sobic007G141600 Sobic001G385300--Sobic007G141600 Sobic005G020600 Sobic005G020600 Sobic001G385300--Sobic005G020600 Sobic001G385300--Sobic004G298600 Sobic001G131900--Sobic003G293400 Sobic001G131900--Sobic003G352900 Sobic004G038400 Sobic004G038400 Sobic001G131900--Sobic004G038400 Sobic001G076600 Sobic001G076600 Sobic001G131900--Sobic001G076600 Sobic001G131900--Sobic001G385300 Sobic001G131900--Sobic005G045800 Sobic001G131900--Sobic004G298600 Sobic002G420100 Sobic002G420100 Sobic001G131900--Sobic002G420100 Sobic007G144100 Sobic007G144100 Sobic001G131900--Sobic007G144100 Sobic004G298600--Sobic001G385300 Sobic004G298600--Sobic001G131900 Sobic004G298600--Sobic003G293400 Sobic004G026600 Sobic004G026600 Sobic004G298600--Sobic004G026600 Sobic005G060100 Sobic005G060100 Sobic004G298600--Sobic005G060100 Sobic001G308500 Sobic001G308500 Sobic004G298600--Sobic001G308500 Sobic004G298600--Sobic001G433600 Sobic004G298600--Sobic007G105700 Sobic004G298600--Sobic003G352900 Sobic007G102300 Sobic007G102300 Sobic009G214500--Sobic007G102300 Sobic009G214500--Sobic001G385300 Sobic007G102000 Sobic007G102000 Sobic009G214500--Sobic007G102000 Sobic009G214500--Sobic009G163100 Sobic001G327100 Sobic001G327100 Sobic009G214500--Sobic001G327100 Sobic009G214500--Sobic001G380700 Sobic009G214500--Sobic003G376900 Sobic004G241300 Sobic004G241300 Sobic009G214500--Sobic004G241300 Sobic003G423700 Sobic003G423700 Sobic009G214500--Sobic003G423700 Sobic002G392400 Sobic002G392400 Sobic007G105700--Sobic002G392400 Sobic002G308000 Sobic002G308000 Sobic007G105700--Sobic002G308000 Sobic007G105700--Sobic005G060100 Sobic007G105700--Sobic001G433600 Sobic007G105700--Sobic001G385300 Sobic007G105700--Sobic001G308500 Sobic007G105700--Sobic004G298600 Sobic008G085950 Sobic008G085950 Sobic007G105700--Sobic008G085950 Sobic001G117900 Sobic001G117900 Sobic007G105700--Sobic001G117900 Sobic001G433600--Sobic001G117900 Sobic001G433600--Sobic002G308000 Sobic001G433600--Sobic005G060100 Sobic001G433600--Sobic007G105700 Sobic009G054400 Sobic009G054400 Sobic001G433600--Sobic009G054400 Sobic001G433600--Sobic004G298600 Sobic007G189100 Sobic007G189100 Sobic001G433600--Sobic007G189100 Sobic001G433600--Sobic001G131900 Sobic007G086600 Sobic007G086600 Sobic001G433600--Sobic007G086600 Sobic006G189000--Sobic001G385300 Sobic006G189000--Sobic001G076600 Sobic006G189000--Sobic003G376900 Sobic006G189000--Sobic001G131900 Sobic006G189000--Sobic003G352900 Sobic006G189000--Sobic004G298600 Sobic010G009700 Sobic010G009700 Sobic006G189000--Sobic010G009700 Sobic006G189000--Sobic005G045800 Sobic006G189000--Sobic001G380700 Sobic003G376900--Sobic002G299500 Sobic003G376900--Sobic009G163100 Sobic003G376900--Sobic003G352900 Sobic003G376900--Sobic008G171900 Sobic003G376900--Sobic001G385300 Sobic003G376900--Sobic005G020600 Sobic001G435700 Sobic001G435700 Sobic003G376900--Sobic001G435700 Sobic003G376900--Sobic005G045800 Sobic001G072000 Sobic001G072000 Sobic003G376900--Sobic001G072000 Sobic003G293400--Sobic001G131900 Sobic003G293400--Sobic003G352900 Sobic004G198300 Sobic004G198300 Sobic003G293400--Sobic004G198300 Sobic003G293400--Sobic001G076600 Sobic003G293400--Sobic002G420100 Sobic003G293400--Sobic004G038400 Sobic003G293400--Sobic004G026600 Sobic003G293400--Sobic004G298600 Sobic003G293400--Sobic007G144100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.