Gene annotation
Transcriptome id Sobic.003G372200.1,Sobic.003G372200.2
Synonym Sb03g041290
Functional annotation AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt A0A1W0W0Q6 , C5XRA6
Pfam PF14531 PF14593 PF07714 PF14593
Panther DB PTHR24356 PTHR24356:SF163
NCBI CDD KOG0592; 3-phosphoinositide-dependent protein kinase (PDK1)
KEGG Orthology K06276; 3-phosphoinositide dependent protein kinase-1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G10540 : 3-phosphoinositide-dependent protein kinase
RAP-DB (Rice) LOC_Os01g65230.1 : AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a026635
Brachypodium KQK10830 , KQK10828 , KQK10829
Barley HORVU3Hr1G082260.6 , HORVU3Hr1G082260.5 , HORVU3Hr1G082260.4 , HORVU3Hr1G082260.3 , HORVU3Hr1G082260.2 , HORVU3Hr1G082260.1 , HORVU3Hr1G082260.9 , HORVU3Hr1G082260.8
Wheat TraesCS3A02G383400 , TraesCS3A02G383400 , TraesCS3A02G383400 , TraesCS3D02G376500 , TraesCS3D02G376500 , TraesCS3D02G376500 , TraesCS3D02G376500 , TraesCS3B02G415800 , TraesCS3B02G415800 , TraesCS3B02G415800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
2 Sobic.004G284800 protein kinase, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
3 Sobic.003G201500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
4 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
5 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
6 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
7 Sobic.002G167100 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
8 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
9 Sobic.002G362500 expressed protein -
10 Sobic.001G505600 DENN domain containing protein, expressed -
11 Sobic.010G065200 expressed protein -
12 Sobic.004G038500 cyclin-related protein, putative, expressed -
13 Sobic.008G132200 tetratricopeptide repeat domain containing protein, expressed -
14 Sobic.002G201700 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
15 Sobic.004G074900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
16 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase
17 Sobic.003G404100 CBS domain-containing protein, putative, expressed -
18 Sobic.004G107100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CID11, putative, expressed -
19 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
20 Sobic.001G400000 NAD dependent epimerase/dehydratase family protein, putative, expressed K12448: UXE, UDP-arabinose 4-epimerase


Gene co-expression network
sample Sobic003G372200 Sobic003G372200 Sobic001G378800 Sobic001G378800 Sobic003G372200--Sobic001G378800 Sobic004G284800 Sobic004G284800 Sobic003G372200--Sobic004G284800 Sobic003G201500 Sobic003G201500 Sobic003G372200--Sobic003G201500 Sobic003G260600 Sobic003G260600 Sobic003G372200--Sobic003G260600 Sobic003G089100 Sobic003G089100 Sobic003G372200--Sobic003G089100 Sobic002G420600 Sobic002G420600 Sobic003G372200--Sobic002G420600 Sobic002G167100 Sobic002G167100 Sobic003G372200--Sobic002G167100 Sobic006G232800 Sobic006G232800 Sobic003G372200--Sobic006G232800 Sobic002G362500 Sobic002G362500 Sobic003G372200--Sobic002G362500 Sobic001G378800--Sobic006G232800 Sobic003G394500 Sobic003G394500 Sobic001G378800--Sobic003G394500 Sobic001G047600 Sobic001G047600 Sobic001G378800--Sobic001G047600 Sobic004G077300 Sobic004G077300 Sobic001G378800--Sobic004G077300 Sobic001G356200 Sobic001G356200 Sobic001G378800--Sobic001G356200 Sobic001G378800--Sobic003G372200 Sobic001G424800 Sobic001G424800 Sobic001G378800--Sobic001G424800 Sobic001G378800--Sobic003G260600 Sobic004G350700 Sobic004G350700 Sobic001G378800--Sobic004G350700 Sobic004G284800--Sobic003G372200 Sobic001G400000 Sobic001G400000 Sobic004G284800--Sobic001G400000 Sobic002G172401 Sobic002G172401 Sobic004G284800--Sobic002G172401 Sobic004G284800--Sobic003G089100 Sobic010G182000 Sobic010G182000 Sobic004G284800--Sobic010G182000 Sobic001G072000 Sobic001G072000 Sobic004G284800--Sobic001G072000 Sobic008G156600 Sobic008G156600 Sobic004G284800--Sobic008G156600 Sobic004G113600 Sobic004G113600 Sobic004G284800--Sobic004G113600 Sobic004G284800--Sobic003G260600 Sobic003G201500--Sobic003G089100 Sobic003G201500--Sobic003G260600 Sobic003G201500--Sobic003G372200 Sobic003G201500--Sobic002G420600 Sobic002G255400 Sobic002G255400 Sobic003G201500--Sobic002G255400 Sobic003G201500--Sobic001G378800 Sobic006G120900 Sobic006G120900 Sobic003G201500--Sobic006G120900 Sobic003G201500--Sobic001G400000 Sobic004G038500 Sobic004G038500 Sobic003G201500--Sobic004G038500 Sobic003G260600--Sobic002G255400 Sobic003G260600--Sobic003G201500 Sobic003G260600--Sobic003G089100 Sobic008G132200 Sobic008G132200 Sobic003G260600--Sobic008G132200 Sobic003G260600--Sobic001G378800 Sobic003G260600--Sobic003G372200 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic007G014700 Sobic007G014700 Sobic003G260600--Sobic007G014700 Sobic003G089100--Sobic003G201500 Sobic003G013700 Sobic003G013700 Sobic003G089100--Sobic003G013700 Sobic003G089100--Sobic003G260600 Sobic003G089100--Sobic002G255400 Sobic003G089100--Sobic004G113600 Sobic003G089100--Sobic001G400000 Sobic003G089100--Sobic002G420600 Sobic005G050400 Sobic005G050400 Sobic003G089100--Sobic005G050400 Sobic003G089100--Sobic001G356200 Sobic002G420600--Sobic003G089100 Sobic004G173700 Sobic004G173700 Sobic002G420600--Sobic004G173700 Sobic002G420600--Sobic006G120900 Sobic002G420600--Sobic003G201500 Sobic002G352200 Sobic002G352200 Sobic002G420600--Sobic002G352200 Sobic002G420600--Sobic002G255400 Sobic001G303900 Sobic001G303900 Sobic002G420600--Sobic001G303900 Sobic002G420600--Sobic003G260600 Sobic002G420600--Sobic003G372200 Sobic002G201700 Sobic002G201700 Sobic002G167100--Sobic002G201700 Sobic003G022000 Sobic003G022000 Sobic002G167100--Sobic003G022000 Sobic009G025700 Sobic009G025700 Sobic002G167100--Sobic009G025700 Sobic002G167100--Sobic003G372200 Sobic007G192500 Sobic007G192500 Sobic002G167100--Sobic007G192500 Sobic001G385000 Sobic001G385000 Sobic002G167100--Sobic001G385000 Sobic007G086600 Sobic007G086600 Sobic002G167100--Sobic007G086600 Sobic009G042000 Sobic009G042000 Sobic002G167100--Sobic009G042000 Sobic010G086300 Sobic010G086300 Sobic002G167100--Sobic010G086300 Sobic006G232800--Sobic001G378800 Sobic006G232800--Sobic001G385000 Sobic006G232800--Sobic003G394500 Sobic001G149000 Sobic001G149000 Sobic006G232800--Sobic001G149000 Sobic006G232800--Sobic010G086300 Sobic001G280500 Sobic001G280500 Sobic006G232800--Sobic001G280500 Sobic002G313100 Sobic002G313100 Sobic006G232800--Sobic002G313100 Sobic002G392400 Sobic002G392400 Sobic006G232800--Sobic002G392400 Sobic006G265800 Sobic006G265800 Sobic006G232800--Sobic006G265800 Sobic001G322400 Sobic001G322400 Sobic002G362500--Sobic001G322400 Sobic002G362500--Sobic001G072000 Sobic009G201000 Sobic009G201000 Sobic002G362500--Sobic009G201000 Sobic008G166100 Sobic008G166100 Sobic002G362500--Sobic008G166100 Sobic007G039200 Sobic007G039200 Sobic002G362500--Sobic007G039200 Sobic009G163100 Sobic009G163100 Sobic002G362500--Sobic009G163100 Sobic002G362500--Sobic004G113600 Sobic001G387300 Sobic001G387300 Sobic002G362500--Sobic001G387300 Sobic004G074900 Sobic004G074900 Sobic002G362500--Sobic004G074900
Octagon: transcription factors


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