Gene annotation
Transcriptome id Sobic.004G284800.2,Sobic.004G284800.1
Synonym WNK6, ATWNK6, ZIK5, Sb04g032080
Functional annotation protein kinase, putative, expressed
UniProt A0A1Z5RPM1 , C5Y1A5
Pfam PF00069
Panther DB PTHR13902 PTHR13902:SF57
NCBI CDD -
KEGG Orthology K08867; WNK, WNK lysine deficient protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G18750 : with no lysine (K) kinase 6
RAP-DB (Rice) LOC_Os02g45130.1 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a021482 , Zm00025a032279
Brachypodium KQK00731 , KQK00678 , KQK00730
Barley HORVU6Hr1G065020.7 , HORVU6Hr1G065020.6 , HORVU6Hr1G065020.5 , HORVU6Hr1G065020.4 , HORVU6Hr1G065020.3 , HORVU6Hr1G065020.2 , HORVU6Hr1G065020.1 , HORVU6Hr1G065020.9 , HORVU6Hr1G065020.8 , HORVU6Hr1G065020.14 , HORVU6Hr1G065020.13 , HORVU6Hr1G065020.12 , HORVU6Hr1G065020.11 , HORVU6Hr1G065020.10
Wheat TraesCS6B02G270400 , TraesCS6D02G236400 , TraesCS6A02G255100 , TraesCS6A02G255100 , TraesCS6D02G236400
Populus -


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cDNA sequences
Sobic.004G284800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1
2 Sobic.001G400000 NAD dependent epimerase/dehydratase family protein, putative, expressed K12448: UXE, UDP-arabinose 4-epimerase
3 Sobic.002G172401 - K07904: Ras-related protein Rab-11A
4 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
5 Sobic.010G182000 26S protease regulatory subunit, putative, expressed K03066: PSMC5, 26S proteasome regulatory subunit T6
6 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
7 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
8 Sobic.004G113600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
9 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
10 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
11 Sobic.004G038500 cyclin-related protein, putative, expressed -
12 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
13 Sobic.001G387300 exostosin family domain containing protein, expressed -
14 Sobic.003G013700 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
15 Sobic.004G107100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CID11, putative, expressed -
16 Sobic.002G201700 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
17 Sobic.005G050400 syntaxin 6, putative, expressed -
18 Sobic.001G230801 - -
19 Sobic.002G362500 expressed protein -
20 Sobic.003G201500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2


Gene co-expression network
sample Sobic004G284800 Sobic004G284800 Sobic003G372200 Sobic003G372200 Sobic004G284800--Sobic003G372200 Sobic001G400000 Sobic001G400000 Sobic004G284800--Sobic001G400000 Sobic002G172401 Sobic002G172401 Sobic004G284800--Sobic002G172401 Sobic003G089100 Sobic003G089100 Sobic004G284800--Sobic003G089100 Sobic010G182000 Sobic010G182000 Sobic004G284800--Sobic010G182000 Sobic001G072000 Sobic001G072000 Sobic004G284800--Sobic001G072000 Sobic008G156600 Sobic008G156600 Sobic004G284800--Sobic008G156600 Sobic004G113600 Sobic004G113600 Sobic004G284800--Sobic004G113600 Sobic003G260600 Sobic003G260600 Sobic004G284800--Sobic003G260600 Sobic001G378800 Sobic001G378800 Sobic003G372200--Sobic001G378800 Sobic003G372200--Sobic004G284800 Sobic003G201500 Sobic003G201500 Sobic003G372200--Sobic003G201500 Sobic003G372200--Sobic003G260600 Sobic003G372200--Sobic003G089100 Sobic002G420600 Sobic002G420600 Sobic003G372200--Sobic002G420600 Sobic002G167100 Sobic002G167100 Sobic003G372200--Sobic002G167100 Sobic006G232800 Sobic006G232800 Sobic003G372200--Sobic006G232800 Sobic002G362500 Sobic002G362500 Sobic003G372200--Sobic002G362500 Sobic001G400000--Sobic004G113600 Sobic001G112600 Sobic001G112600 Sobic001G400000--Sobic001G112600 Sobic001G384200 Sobic001G384200 Sobic001G400000--Sobic001G384200 Sobic005G050400 Sobic005G050400 Sobic001G400000--Sobic005G050400 Sobic003G244400 Sobic003G244400 Sobic001G400000--Sobic003G244400 Sobic006G265800 Sobic006G265800 Sobic001G400000--Sobic006G265800 Sobic004G007400 Sobic004G007400 Sobic001G400000--Sobic004G007400 Sobic008G055600 Sobic008G055600 Sobic001G400000--Sobic008G055600 Sobic001G400000--Sobic008G156600 Sobic005G020600 Sobic005G020600 Sobic002G172401--Sobic005G020600 Sobic002G172401--Sobic008G156600 Sobic002G172401--Sobic005G050400 Sobic009G163100 Sobic009G163100 Sobic002G172401--Sobic009G163100 Sobic002G172401--Sobic001G072000 Sobic002G172401--Sobic001G112600 Sobic002G172401--Sobic004G113600 Sobic004G062200 Sobic004G062200 Sobic002G172401--Sobic004G062200 Sobic004G279200 Sobic004G279200 Sobic002G172401--Sobic004G279200 Sobic003G089100--Sobic003G201500 Sobic003G013700 Sobic003G013700 Sobic003G089100--Sobic003G013700 Sobic003G089100--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic003G089100--Sobic002G255400 Sobic003G089100--Sobic004G113600 Sobic003G089100--Sobic001G400000 Sobic003G089100--Sobic002G420600 Sobic003G089100--Sobic005G050400 Sobic001G356200 Sobic001G356200 Sobic003G089100--Sobic001G356200 Sobic002G420100 Sobic002G420100 Sobic010G182000--Sobic002G420100 Sobic003G423700 Sobic003G423700 Sobic010G182000--Sobic003G423700 Sobic010G182000--Sobic008G156600 Sobic008G104000 Sobic008G104000 Sobic010G182000--Sobic008G104000 Sobic010G182000--Sobic001G072000 Sobic010G182000--Sobic009G163100 Sobic010G182000--Sobic001G400000 Sobic010G182000--Sobic002G172401 Sobic010G182000--Sobic005G050400 Sobic001G322400 Sobic001G322400 Sobic001G072000--Sobic001G322400 Sobic001G072000--Sobic005G050400 Sobic001G072000--Sobic001G112600 Sobic001G072000--Sobic004G279200 Sobic001G072000--Sobic008G156600 Sobic001G432200 Sobic001G432200 Sobic001G072000--Sobic001G432200 Sobic001G072000--Sobic009G163100 Sobic009G242200 Sobic009G242200 Sobic001G072000--Sobic009G242200 Sobic004G038500 Sobic004G038500 Sobic001G072000--Sobic004G038500 Sobic008G156600--Sobic009G163100 Sobic008G156600--Sobic005G050400 Sobic008G156600--Sobic001G072000 Sobic008G156600--Sobic001G112600 Sobic008G156600--Sobic005G020600 Sobic008G171900 Sobic008G171900 Sobic008G156600--Sobic008G171900 Sobic004G241300 Sobic004G241300 Sobic008G156600--Sobic004G241300 Sobic008G156600--Sobic004G007400 Sobic008G156600--Sobic001G322400 Sobic004G113600--Sobic001G112600 Sobic004G113600--Sobic003G244400 Sobic004G358000 Sobic004G358000 Sobic004G113600--Sobic004G358000 Sobic004G113600--Sobic009G242200 Sobic002G170100 Sobic002G170100 Sobic004G113600--Sobic002G170100 Sobic004G113600--Sobic005G050400 Sobic004G113600--Sobic001G384200 Sobic004G113600--Sobic001G400000 Sobic005G054150 Sobic005G054150 Sobic004G113600--Sobic005G054150 Sobic003G260600--Sobic002G255400 Sobic003G260600--Sobic003G201500 Sobic003G260600--Sobic003G089100 Sobic008G132200 Sobic008G132200 Sobic003G260600--Sobic008G132200 Sobic003G260600--Sobic001G378800 Sobic003G260600--Sobic003G372200 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic007G014700 Sobic007G014700 Sobic003G260600--Sobic007G014700
Octagon: transcription factors


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