Gene annotation
Transcriptome id Sobic.001G230801.2,Sobic.001G230801.1,Sobic.001G230801.3
Synonym -
Functional annotation -
UniProt A0A1Z5S6Y1 , A0A1Z5S6Y0 , A0A1Z5S6Y7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G038500 cyclin-related protein, putative, expressed -
2 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
3 Sobic.005G050400 syntaxin 6, putative, expressed -
4 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
5 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
6 Sobic.003G005700 AGC_PVPK_like_kin82y.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
7 Sobic.004G180100 - -
8 Sobic.005G144000 glycosyltransferase, putative, expressed -
9 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
10 Sobic.003G065100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR1 - Auxin-responsive SAUR gene family member, expressed -
11 Sobic.005G110505 - -
12 Sobic.002G176000 membrane protein, putative, expressed -
13 Sobic.001G400000 NAD dependent epimerase/dehydratase family protein, putative, expressed K12448: UXE, UDP-arabinose 4-epimerase
14 Sobic.003G441000 rhoGAP domain containing protein, expressed -
15 Sobic.004G007400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
16 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
17 Sobic.008G122800 Recombinant SbCYP728B35 catalyzed the conversion of 5DS (5-deoxystrigol) to sorgomol in vitro.(PubMedID : 34970291)@cytochrome P450, putative, expressed -
18 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
19 Sobic.004G113600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
20 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase


Gene co-expression network
sample Sobic001G230801 Sobic001G230801 Sobic004G038500 Sobic004G038500 Sobic001G230801--Sobic004G038500 Sobic001G072000 Sobic001G072000 Sobic001G230801--Sobic001G072000 Sobic005G050400 Sobic005G050400 Sobic001G230801--Sobic005G050400 Sobic008G156600 Sobic008G156600 Sobic001G230801--Sobic008G156600 Sobic001G112600 Sobic001G112600 Sobic001G230801--Sobic001G112600 Sobic003G005700 Sobic003G005700 Sobic001G230801--Sobic003G005700 Sobic004G180100 Sobic004G180100 Sobic001G230801--Sobic004G180100 Sobic005G144000 Sobic005G144000 Sobic001G230801--Sobic005G144000 Sobic004G279200 Sobic004G279200 Sobic001G230801--Sobic004G279200 Sobic004G038500--Sobic001G072000 Sobic004G038500--Sobic004G279200 Sobic004G038500--Sobic001G230801 Sobic006G267100 Sobic006G267100 Sobic004G038500--Sobic006G267100 Sobic004G074900 Sobic004G074900 Sobic004G038500--Sobic004G074900 Sobic001G322400 Sobic001G322400 Sobic004G038500--Sobic001G322400 Sobic004G038500--Sobic003G005700 Sobic004G038500--Sobic005G050400 Sobic004G038500--Sobic001G112600 Sobic001G072000--Sobic001G322400 Sobic001G072000--Sobic005G050400 Sobic001G072000--Sobic001G112600 Sobic001G072000--Sobic004G279200 Sobic001G072000--Sobic008G156600 Sobic001G432200 Sobic001G432200 Sobic001G072000--Sobic001G432200 Sobic009G163100 Sobic009G163100 Sobic001G072000--Sobic009G163100 Sobic009G242200 Sobic009G242200 Sobic001G072000--Sobic009G242200 Sobic001G072000--Sobic004G038500 Sobic005G050400--Sobic001G112600 Sobic005G050400--Sobic001G072000 Sobic005G050400--Sobic008G156600 Sobic005G050400--Sobic009G242200 Sobic002G170100 Sobic002G170100 Sobic005G050400--Sobic002G170100 Sobic003G441000 Sobic003G441000 Sobic005G050400--Sobic003G441000 Sobic004G007400 Sobic004G007400 Sobic005G050400--Sobic004G007400 Sobic005G050400--Sobic005G144000 Sobic005G050400--Sobic009G163100 Sobic008G156600--Sobic009G163100 Sobic008G156600--Sobic005G050400 Sobic008G156600--Sobic001G072000 Sobic008G156600--Sobic001G112600 Sobic005G020600 Sobic005G020600 Sobic008G156600--Sobic005G020600 Sobic008G171900 Sobic008G171900 Sobic008G156600--Sobic008G171900 Sobic004G241300 Sobic004G241300 Sobic008G156600--Sobic004G241300 Sobic008G156600--Sobic004G007400 Sobic008G156600--Sobic001G322400 Sobic001G112600--Sobic005G050400 Sobic001G112600--Sobic009G242200 Sobic001G112600--Sobic003G441000 Sobic001G112600--Sobic002G170100 Sobic001G414650 Sobic001G414650 Sobic001G112600--Sobic001G414650 Sobic003G244400 Sobic003G244400 Sobic001G112600--Sobic003G244400 Sobic008G055200 Sobic008G055200 Sobic001G112600--Sobic008G055200 Sobic004G358000 Sobic004G358000 Sobic001G112600--Sobic004G358000 Sobic001G112600--Sobic005G144000 Sobic009G145000 Sobic009G145000 Sobic003G005700--Sobic009G145000 Sobic003G005700--Sobic001G432200 Sobic001G133400 Sobic001G133400 Sobic003G005700--Sobic001G133400 Sobic002G097200 Sobic002G097200 Sobic003G005700--Sobic002G097200 Sobic009G048700 Sobic009G048700 Sobic003G005700--Sobic009G048700 Sobic007G109301 Sobic007G109301 Sobic003G005700--Sobic007G109301 Sobic002G060101 Sobic002G060101 Sobic003G005700--Sobic002G060101 Sobic007G212500 Sobic007G212500 Sobic003G005700--Sobic007G212500 Sobic002G364700 Sobic002G364700 Sobic003G005700--Sobic002G364700 Sobic001G234500 Sobic001G234500 Sobic004G180100--Sobic001G234500 Sobic009G086600 Sobic009G086600 Sobic004G180100--Sobic009G086600 Sobic004G042501 Sobic004G042501 Sobic004G180100--Sobic004G042501 Sobic010G145000 Sobic010G145000 Sobic004G180100--Sobic010G145000 Sobic005G170400 Sobic005G170400 Sobic004G180100--Sobic005G170400 Sobic001G183633 Sobic001G183633 Sobic004G180100--Sobic001G183633 Sobic008G122800 Sobic008G122800 Sobic004G180100--Sobic008G122800 Sobic008G176500 Sobic008G176500 Sobic004G180100--Sobic008G176500 Sobic010G034400 Sobic010G034400 Sobic004G180100--Sobic010G034400 Sobic005G144000--Sobic003G441000 Sobic005G144000--Sobic002G170100 Sobic005G144000--Sobic008G122800 Sobic001G279000 Sobic001G279000 Sobic005G144000--Sobic001G279000 Sobic005G144000--Sobic009G242200 Sobic001G503600 Sobic001G503600 Sobic005G144000--Sobic001G503600 Sobic005G144000--Sobic004G180100 Sobic008G071300 Sobic008G071300 Sobic005G144000--Sobic008G071300 Sobic002G404600 Sobic002G404600 Sobic005G144000--Sobic002G404600 Sobic004G279200--Sobic001G072000 Sobic006G070564 Sobic006G070564 Sobic004G279200--Sobic006G070564 Sobic004G279200--Sobic005G050400 Sobic004G279200--Sobic001G322400 Sobic004G279200--Sobic001G414650 Sobic004G062200 Sobic004G062200 Sobic004G279200--Sobic004G062200 Sobic004G279200--Sobic006G267100 Sobic006G171600 Sobic006G171600 Sobic004G279200--Sobic006G171600 Sobic004G279200--Sobic001G112600
Octagon: transcription factors


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