Gene annotation
Transcriptome id Sobic.002G176000.1
Synonym Sb02g022480
Functional annotation membrane protein, putative, expressed
UniProt A0A1B6QC01
Pfam PF01925
Panther DB PTHR14255 PTHR14255:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G25737 : Sulfite exporter TauE/SafE family protein
RAP-DB (Rice) LOC_Os09g17600.2 : membrane protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7B02G021300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G170500 aquaporin protein, putative, expressed K09873: aquaporin TIP
2 Sobic.006G224400 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K12158: ubiquitin-like protein Nedd8
K04551: ubiquitin B
3 Sobic.007G081800 MBTB22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.004G046700 OsFBLD3 - F-box, LRR and FBD domain containing protein, expressed -
5 Sobic.010G123800 expressed protein -
6 Sobic.005G058300 expressed protein -
7 Sobic.009G182100 cysteine proteinase inhibitor precursor protein, putative, expressed -
8 Sobic.007G110800 expressed protein -
9 Sobic.006G017900 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
10 Sobic.001G211700 MBTB33 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
11 Sobic.002G182701 - -
12 Sobic.002G384900 expressed protein -
13 Sobic.007G167950 - -
14 Sobic.005G087732 - -
15 Sobic.006G017700 expressed protein -
16 Sobic.007G082100 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
17 Sobic.004G100300 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.009G060100 alliin lyase precursor, putative, expressed K16903: L-tryptophan---pyruvate aminotransferase
19 Sobic.003G191200 expressed protein -
20 Sobic.009G110600 OsFBX422 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic002G176000 Sobic002G176000 Sobic006G170500 Sobic006G170500 Sobic002G176000--Sobic006G170500 Sobic006G224400 Sobic006G224400 Sobic002G176000--Sobic006G224400 Sobic007G081800 Sobic007G081800 Sobic002G176000--Sobic007G081800 Sobic004G046700 Sobic004G046700 Sobic002G176000--Sobic004G046700 Sobic010G123800 Sobic010G123800 Sobic002G176000--Sobic010G123800 Sobic005G058300 Sobic005G058300 Sobic002G176000--Sobic005G058300 Sobic009G182100 Sobic009G182100 Sobic002G176000--Sobic009G182100 Sobic007G110800 Sobic007G110800 Sobic002G176000--Sobic007G110800 Sobic006G017900 Sobic006G017900 Sobic002G176000--Sobic006G017900 Sobic006G170500--Sobic007G110800 Sobic006G170500--Sobic006G224400 Sobic004G086900 Sobic004G086900 Sobic006G170500--Sobic004G086900 Sobic007G082300 Sobic007G082300 Sobic006G170500--Sobic007G082300 Sobic005G087732 Sobic005G087732 Sobic006G170500--Sobic005G087732 Sobic007G167950 Sobic007G167950 Sobic006G170500--Sobic007G167950 Sobic001G364300 Sobic001G364300 Sobic006G170500--Sobic001G364300 Sobic008G177001 Sobic008G177001 Sobic006G170500--Sobic008G177001 Sobic005G058200 Sobic005G058200 Sobic006G170500--Sobic005G058200 Sobic006G224400--Sobic005G058300 Sobic006G224400--Sobic007G167950 Sobic006G224400--Sobic007G081800 Sobic006G224400--Sobic005G087732 Sobic006G224400--Sobic007G110800 Sobic006G224400--Sobic010G123800 Sobic006G224400--Sobic004G046700 Sobic006G224400--Sobic004G086900 Sobic006G224400--Sobic007G082300 Sobic007G081800--Sobic005G058300 Sobic007G081800--Sobic010G123800 Sobic007G081800--Sobic004G046700 Sobic007G081800--Sobic006G224400 Sobic007G081800--Sobic007G167950 Sobic007G081800--Sobic005G087732 Sobic007G081800--Sobic007G110800 Sobic009G060100 Sobic009G060100 Sobic007G081800--Sobic009G060100 Sobic007G081800--Sobic006G017900 Sobic004G046700--Sobic010G123800 Sobic004G046700--Sobic007G081800 Sobic004G046700--Sobic005G058300 Sobic004G046700--Sobic006G017900 Sobic001G211700 Sobic001G211700 Sobic004G046700--Sobic001G211700 Sobic004G046700--Sobic006G224400 Sobic007G082100 Sobic007G082100 Sobic004G046700--Sobic007G082100 Sobic003G191200 Sobic003G191200 Sobic004G046700--Sobic003G191200 Sobic004G046700--Sobic007G167950 Sobic010G123800--Sobic004G046700 Sobic010G123800--Sobic007G081800 Sobic010G123800--Sobic005G058300 Sobic010G123800--Sobic006G224400 Sobic010G123800--Sobic007G167950 Sobic010G123800--Sobic005G087732 Sobic010G123800--Sobic006G017900 Sobic010G123800--Sobic001G211700 Sobic010G123800--Sobic007G082100 Sobic005G058300--Sobic007G081800 Sobic005G058300--Sobic010G123800 Sobic005G058300--Sobic004G046700 Sobic005G058300--Sobic007G167950 Sobic005G058300--Sobic005G087732 Sobic005G058300--Sobic006G224400 Sobic005G058300--Sobic007G110800 Sobic005G058300--Sobic009G060100 Sobic005G058300--Sobic004G086900 Sobic002G182701 Sobic002G182701 Sobic009G182100--Sobic002G182701 Sobic006G017700 Sobic006G017700 Sobic009G182100--Sobic006G017700 Sobic005G000900 Sobic005G000900 Sobic009G182100--Sobic005G000900 Sobic009G182100--Sobic006G017900 Sobic002G156400 Sobic002G156400 Sobic009G182100--Sobic002G156400 Sobic009G182100--Sobic001G211700 Sobic005G140900 Sobic005G140900 Sobic009G182100--Sobic005G140900 Sobic002G384900 Sobic002G384900 Sobic009G182100--Sobic002G384900 Sobic008G138400 Sobic008G138400 Sobic009G182100--Sobic008G138400 Sobic007G110800--Sobic005G087732 Sobic007G110800--Sobic007G167950 Sobic007G110800--Sobic004G086900 Sobic007G110800--Sobic007G082300 Sobic007G110800--Sobic005G058300 Sobic007G110800--Sobic006G224400 Sobic007G110800--Sobic007G081800 Sobic007G110800--Sobic010G123800 Sobic007G110800--Sobic004G046700 Sobic006G017900--Sobic001G211700 Sobic006G017900--Sobic006G017700 Sobic006G017900--Sobic002G182701 Sobic006G017900--Sobic002G384900 Sobic006G017900--Sobic004G046700 Sobic006G017900--Sobic005G000900 Sobic006G017900--Sobic010G123800 Sobic006G017900--Sobic007G082100 Sobic004G100300 Sobic004G100300 Sobic006G017900--Sobic004G100300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.