Gene annotation
Transcriptome id Sobic.003G065100.1
Synonym SbSAUR29, small auxin up RNA, Sb03g005555
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR1 - Auxin-responsive SAUR gene family member, expressed
UniProt A0A1B6Q1P4
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT1G16510 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os01g06230.1 : OsSAUR1 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G279000 OsFBX382 - F-box domain containing protein, expressed -
2 Sobic.002G190750 - -
3 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
4 Sobic.003G013900 - -
5 Sobic.008G122800 Recombinant SbCYP728B35 catalyzed the conversion of 5DS (5-deoxystrigol) to sorgomol in vitro.(PubMedID : 34970291)@cytochrome P450, putative, expressed -
6 Sobic.003G133600 major facilitator superfamily antiporter, putative, expressed -
7 Sobic.007G091400 diacylglycerol kinase catalytic domain family protein, expressed K00901: dgkA, diacylglycerol kinase (ATP)
8 Sobic.001G234500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
9 Sobic.006G236400 glutaredoxin, putative, expressed -
10 Sobic.005G049200 exo70 exocyst complex subunit, putative, expressed -
11 Sobic.001G183633 - -
12 Sobic.004G180100 - -
13 Sobic.001G029300 anthranilate synthase component I-1, chloroplast precursor, putative, expressed K01657: anthranilate synthase component I
14 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
15 Sobic.002G104801 - -
16 Sobic.006G095700 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
17 Sobic.001G240600 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
18 Sobic.009G207700 cell cycle control protein, putative, expressed -
19 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
20 Sobic.003G019450 - -


Gene co-expression network
sample Sobic003G065100 Sobic003G065100 Sobic001G279000 Sobic001G279000 Sobic003G065100--Sobic001G279000 Sobic002G190750 Sobic002G190750 Sobic003G065100--Sobic002G190750 Sobic001G370400 Sobic001G370400 Sobic003G065100--Sobic001G370400 Sobic003G013900 Sobic003G013900 Sobic003G065100--Sobic003G013900 Sobic008G122800 Sobic008G122800 Sobic003G065100--Sobic008G122800 Sobic003G133600 Sobic003G133600 Sobic003G065100--Sobic003G133600 Sobic007G091400 Sobic007G091400 Sobic003G065100--Sobic007G091400 Sobic001G234500 Sobic001G234500 Sobic003G065100--Sobic001G234500 Sobic006G236400 Sobic006G236400 Sobic003G065100--Sobic006G236400 Sobic001G279000--Sobic003G013900 Sobic002G380300 Sobic002G380300 Sobic001G279000--Sobic002G380300 Sobic008G176500 Sobic008G176500 Sobic001G279000--Sobic008G176500 Sobic003G019450 Sobic003G019450 Sobic001G279000--Sobic003G019450 Sobic001G279000--Sobic007G091400 Sobic001G279000--Sobic006G236400 Sobic001G279000--Sobic001G370400 Sobic010G016200 Sobic010G016200 Sobic001G279000--Sobic010G016200 Sobic003G304600 Sobic003G304600 Sobic001G279000--Sobic003G304600 Sobic009G207700 Sobic009G207700 Sobic002G190750--Sobic009G207700 Sobic001G029300 Sobic001G029300 Sobic002G190750--Sobic001G029300 Sobic006G074150 Sobic006G074150 Sobic002G190750--Sobic006G074150 Sobic001G068066 Sobic001G068066 Sobic002G190750--Sobic001G068066 Sobic010G242600 Sobic010G242600 Sobic002G190750--Sobic010G242600 Sobic003G297100 Sobic003G297100 Sobic002G190750--Sobic003G297100 Sobic002G190750--Sobic006G236400 Sobic002G104801 Sobic002G104801 Sobic002G190750--Sobic002G104801 Sobic001G163666 Sobic001G163666 Sobic002G190750--Sobic001G163666 Sobic009G061601 Sobic009G061601 Sobic001G370400--Sobic009G061601 Sobic001G370400--Sobic003G297100 Sobic001G063300 Sobic001G063300 Sobic001G370400--Sobic001G063300 Sobic006G205400 Sobic006G205400 Sobic001G370400--Sobic006G205400 Sobic007G131000 Sobic007G131000 Sobic001G370400--Sobic007G131000 Sobic003G151400 Sobic003G151400 Sobic001G370400--Sobic003G151400 Sobic007G215200 Sobic007G215200 Sobic001G370400--Sobic007G215200 Sobic002G015900 Sobic002G015900 Sobic001G370400--Sobic002G015900 Sobic001G294500 Sobic001G294500 Sobic001G370400--Sobic001G294500 Sobic006G095700 Sobic006G095700 Sobic003G013900--Sobic006G095700 Sobic010G187700 Sobic010G187700 Sobic003G013900--Sobic010G187700 Sobic006G071096 Sobic006G071096 Sobic003G013900--Sobic006G071096 Sobic009G177300 Sobic009G177300 Sobic003G013900--Sobic009G177300 Sobic009G087200 Sobic009G087200 Sobic003G013900--Sobic009G087200 Sobic008G124301 Sobic008G124301 Sobic003G013900--Sobic008G124301 Sobic003G013900--Sobic007G091400 Sobic002G066100 Sobic002G066100 Sobic003G013900--Sobic002G066100 Sobic001G473700 Sobic001G473700 Sobic003G013900--Sobic001G473700 Sobic004G180100 Sobic004G180100 Sobic008G122800--Sobic004G180100 Sobic005G144000 Sobic005G144000 Sobic008G122800--Sobic005G144000 Sobic002G170100 Sobic002G170100 Sobic008G122800--Sobic002G170100 Sobic008G122800--Sobic001G279000 Sobic008G122800--Sobic001G234500 Sobic001G183633 Sobic001G183633 Sobic008G122800--Sobic001G183633 Sobic008G122800--Sobic003G013900 Sobic003G441000 Sobic003G441000 Sobic008G122800--Sobic003G441000 Sobic009G086600 Sobic009G086600 Sobic008G122800--Sobic009G086600 Sobic007G094700 Sobic007G094700 Sobic003G133600--Sobic007G094700 Sobic004G203150 Sobic004G203150 Sobic003G133600--Sobic004G203150 Sobic007G219601 Sobic007G219601 Sobic003G133600--Sobic007G219601 Sobic003G133600--Sobic001G068066 Sobic004G328200 Sobic004G328200 Sobic003G133600--Sobic004G328200 Sobic002G418300 Sobic002G418300 Sobic003G133600--Sobic002G418300 Sobic003G133600--Sobic001G029300 Sobic006G064450 Sobic006G064450 Sobic003G133600--Sobic006G064450 Sobic005G078000 Sobic005G078000 Sobic003G133600--Sobic005G078000 Sobic004G070600 Sobic004G070600 Sobic007G091400--Sobic004G070600 Sobic009G102700 Sobic009G102700 Sobic007G091400--Sobic009G102700 Sobic010G252600 Sobic010G252600 Sobic007G091400--Sobic010G252600 Sobic002G254700 Sobic002G254700 Sobic007G091400--Sobic002G254700 Sobic001G528700 Sobic001G528700 Sobic007G091400--Sobic001G528700 Sobic002G295800 Sobic002G295800 Sobic007G091400--Sobic002G295800 Sobic001G452500 Sobic001G452500 Sobic007G091400--Sobic001G452500 Sobic009G105100 Sobic009G105100 Sobic007G091400--Sobic009G105100 Sobic006G026200 Sobic006G026200 Sobic007G091400--Sobic006G026200 Sobic001G234500--Sobic009G086600 Sobic001G234500--Sobic001G183633 Sobic010G145000 Sobic010G145000 Sobic001G234500--Sobic010G145000 Sobic001G234500--Sobic004G180100 Sobic002G150932 Sobic002G150932 Sobic001G234500--Sobic002G150932 Sobic010G034400 Sobic010G034400 Sobic001G234500--Sobic010G034400 Sobic001G234500--Sobic003G304600 Sobic001G234500--Sobic008G176500 Sobic001G094700 Sobic001G094700 Sobic001G234500--Sobic001G094700 Sobic007G042800 Sobic007G042800 Sobic006G236400--Sobic007G042800 Sobic006G236400--Sobic009G207700 Sobic010G177200 Sobic010G177200 Sobic006G236400--Sobic010G177200 Sobic006G236400--Sobic006G074150 Sobic004G255900 Sobic004G255900 Sobic006G236400--Sobic004G255900 Sobic005G191300 Sobic005G191300 Sobic006G236400--Sobic005G191300 Sobic008G043300 Sobic008G043300 Sobic006G236400--Sobic008G043300 Sobic001G092500 Sobic001G092500 Sobic006G236400--Sobic001G092500 Sobic004G134000 Sobic004G134000 Sobic006G236400--Sobic004G134000
Octagon: transcription factors


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