Gene annotation
Transcriptome id Sobic.006G095700.1
Synonym GAD4, Sb06g018050
Functional annotation glutamate decarboxylase, putative, expressed
UniProt C5Y9A0
Pfam PF00282
Panther DB PTHR11999 PTHR11999:SF81
NCBI CDD -
KEGG Orthology K01580; E4.1.1.15, gadB, gadA, glutamate decarboxylase
Gene Ontology GO:0016831; carboxy-lyase activity


Orthologs (automatic annotation)
TAIR AT2G02010 : glutamate decarboxylase 4
RAP-DB (Rice) LOC_Os04g37460.1 : glutamate decarboxylase, putative, expressed
MaizeGDB (Corn) Zm00025a005384 , Zm00025a052950 , Zm00025a007922 , Zm00025a011205 , Zm00025a011196
Brachypodium KQK13491 , KQJ98585 , PNT77787 , KQJ82857 , KQK22684 , KQJ82853
Barley HORVU3Hr1G003050.7 , HORVU3Hr1G003050.6 , HORVU3Hr1G003050.5 , HORVU3Hr1G003050.4 , HORVU3Hr1G003050.3 , HORVU3Hr1G003050.2 , HORVU3Hr1G003050.1 , HORVU2Hr1G078580.8 , HORVU2Hr1G078580.9 , HORVU2Hr1G078580.2 , HORVU2Hr1G078580.3 , HORVU2Hr1G078580.1 , HORVU2Hr1G078580.6 , HORVU2Hr1G078580.7 , HORVU2Hr1G078580.4 , HORVU2Hr1G078580.5 , HORVU2Hr1G078560.1 , HORVU2Hr1G078560.2 , HORVU2Hr1G078560.3 , HORVU2Hr1G078560.4 , HORVU2Hr1G078560.5 , HORVU2Hr1G078560.6 , HORVU2Hr1G078580.11 , HORVU2Hr1G078580.17 , HORVU2Hr1G078560.7 , HORVU4Hr1G008700.8 , HORVU4Hr1G064790.9 , HORVU4Hr1G064790.14 , HORVU4Hr1G064790.12 , HORVU4Hr1G064790.13 , HORVU4Hr1G064790.10 , HORVU4Hr1G064790.11 , HORVU4Hr1G008700.9 , HORVU4Hr1G064790.5 , HORVU4Hr1G064790.4 , HORVU4Hr1G064790.6 , HORVU4Hr1G064790.1 , HORVU4Hr1G064790.2 , HORVU4Hr1G064790.3 , HORVU4Hr1G008700.1 , HORVU4Hr1G008700.3 , HORVU4Hr1G008700.2 , HORVU4Hr1G008700.5 , HORVU4Hr1G008700.7 , HORVU4Hr1G008700.6 , HORVU7Hr1G081730.1 , HORVU2Hr1G078580.18 , HORVU2Hr1G078580.10 , HORVU4Hr1G064790.8 , HORVU2Hr1G078580.12 , HORVU2Hr1G078580.13 , HORVU2Hr1G078580.14 , HORVU2Hr1G078580.15 , HORVU2Hr1G078580.16 , HORVU4Hr1G008700.4 , HORVU4Hr1G064790.7 , HORVU3Hr1G112860.2 , HORVU3Hr1G112860.1
Wheat TraesCS4A02G075600 , TraesCS3B02G022900 , TraesCS3B02G022900 , TraesCS4B02G231400 , TraesCS3B02G583600 , TraesCS2D02G313500 , TraesCS2B02G334000 , TraesCS2A02G315800 , TraesCS4A02G262600 , TraesCS4A02G262600 , TraesCS2D02G313800 , TraesCS4B02G052300 , TraesCS2B02G333700 , TraesCS2B02G333700 , TraesCS3D02G523200 , TraesCS3D02G023900 , TraesCS3D02G023900 , TraesCS4D02G052500 , TraesCS4D02G052500 , TraesCS3A02G022600 , TraesCS3A02G022600 , TraesCS3A02G022600 , TraesCS2A02G315300 , TraesCS3A02G515300 , TraesCS3A02G515300 , TraesCS4D02G232700 , TraesCS4D02G232700 , TraesCS4A02G369200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G283000 transferase family protein, putative, expressed -
2 Sobic.004G137200 fasciclin-like arabinogalactan precursor protein, putative, expressed -
3 Sobic.001G540000 expansin precursor, putative, expressed -
4 Sobic.004G025600 - -
5 Sobic.002G091200 pectinesterase inhibitor domain containing protein, expressed -
6 Sobic.002G106800 expressed protein -
7 Sobic.003G173800 polygalacturonase, putative, expressed -
8 Sobic.009G098900 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
9 Sobic.005G010000 expressed protein -
10 Sobic.010G056500 - -
11 Sobic.004G131400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
12 Sobic.004G025500 - -
13 Sobic.009G089532 - -
14 Sobic.004G350400 pectinesterase, putative, expressed K01051: pectinesterase
15 Sobic.003G438500 THION25 - Plant thionin family protein precursor, expressed -
16 Sobic.010G161400 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
17 Sobic.001G539700 expansin precursor, putative, expressed -
18 Sobic.008G028100 pollen allergen, putative, expressed -
19 Sobic.007G100800 CSLD3 - cellulose synthase-like family D, expressed -
20 Sobic.008G186900 SCP-like extracellular protein, expressed -


Gene co-expression network
sample Sobic006G095700 Sobic006G095700 Sobic002G283000 Sobic002G283000 Sobic006G095700--Sobic002G283000 Sobic004G137200 Sobic004G137200 Sobic006G095700--Sobic004G137200 Sobic001G540000 Sobic001G540000 Sobic006G095700--Sobic001G540000 Sobic004G025600 Sobic004G025600 Sobic006G095700--Sobic004G025600 Sobic002G091200 Sobic002G091200 Sobic006G095700--Sobic002G091200 Sobic002G106800 Sobic002G106800 Sobic006G095700--Sobic002G106800 Sobic003G173800 Sobic003G173800 Sobic006G095700--Sobic003G173800 Sobic009G098900 Sobic009G098900 Sobic006G095700--Sobic009G098900 Sobic005G010000 Sobic005G010000 Sobic006G095700--Sobic005G010000 Sobic002G283000--Sobic004G137200 Sobic009G089532 Sobic009G089532 Sobic002G283000--Sobic009G089532 Sobic004G025500 Sobic004G025500 Sobic002G283000--Sobic004G025500 Sobic002G283000--Sobic009G098900 Sobic001G539700 Sobic001G539700 Sobic002G283000--Sobic001G539700 Sobic004G251900 Sobic004G251900 Sobic002G283000--Sobic004G251900 Sobic002G283000--Sobic003G173800 Sobic008G028100 Sobic008G028100 Sobic002G283000--Sobic008G028100 Sobic002G283000--Sobic005G010000 Sobic004G137200--Sobic009G098900 Sobic004G137200--Sobic003G173800 Sobic004G137200--Sobic002G106800 Sobic004G137200--Sobic004G025500 Sobic004G137200--Sobic005G010000 Sobic004G137200--Sobic009G089532 Sobic004G137200--Sobic001G540000 Sobic004G137200--Sobic002G091200 Sobic004G137200--Sobic002G283000 Sobic001G540000--Sobic004G025600 Sobic001G540000--Sobic002G091200 Sobic010G056500 Sobic010G056500 Sobic001G540000--Sobic010G056500 Sobic004G131400 Sobic004G131400 Sobic001G540000--Sobic004G131400 Sobic004G350400 Sobic004G350400 Sobic001G540000--Sobic004G350400 Sobic001G540000--Sobic002G106800 Sobic001G540000--Sobic004G137200 Sobic001G540000--Sobic003G173800 Sobic001G540000--Sobic005G010000 Sobic004G025600--Sobic001G540000 Sobic004G025600--Sobic004G131400 Sobic004G025600--Sobic010G056500 Sobic004G025600--Sobic002G091200 Sobic004G025600--Sobic004G350400 Sobic004G025600--Sobic004G137200 Sobic004G025600--Sobic002G106800 Sobic004G025600--Sobic003G173800 Sobic001G332200 Sobic001G332200 Sobic004G025600--Sobic001G332200 Sobic002G091200--Sobic001G540000 Sobic002G091200--Sobic004G025600 Sobic002G091200--Sobic002G106800 Sobic002G091200--Sobic003G173800 Sobic002G091200--Sobic004G350400 Sobic002G091200--Sobic010G056500 Sobic002G091200--Sobic004G137200 Sobic002G091200--Sobic004G131400 Sobic002G091200--Sobic005G010000 Sobic002G106800--Sobic003G173800 Sobic002G106800--Sobic005G010000 Sobic002G106800--Sobic009G098900 Sobic002G106800--Sobic002G091200 Sobic002G106800--Sobic004G137200 Sobic002G106800--Sobic001G540000 Sobic010G161400 Sobic010G161400 Sobic002G106800--Sobic010G161400 Sobic002G106800--Sobic004G025500 Sobic008G186900 Sobic008G186900 Sobic002G106800--Sobic008G186900 Sobic003G173800--Sobic005G010000 Sobic003G173800--Sobic002G106800 Sobic003G173800--Sobic009G098900 Sobic003G173800--Sobic010G161400 Sobic003G173800--Sobic008G186900 Sobic003G173800--Sobic004G137200 Sobic003G173800--Sobic002G091200 Sobic007G100800 Sobic007G100800 Sobic003G173800--Sobic007G100800 Sobic003G061700 Sobic003G061700 Sobic003G173800--Sobic003G061700 Sobic009G098900--Sobic003G173800 Sobic009G098900--Sobic004G025500 Sobic009G098900--Sobic010G161400 Sobic009G098900--Sobic002G106800 Sobic009G098900--Sobic009G089532 Sobic009G098900--Sobic004G137200 Sobic009G098900--Sobic005G010000 Sobic009G098900--Sobic001G539700 Sobic002G002600 Sobic002G002600 Sobic009G098900--Sobic002G002600 Sobic005G010000--Sobic003G173800 Sobic005G010000--Sobic002G106800 Sobic005G010000--Sobic007G100800 Sobic005G010000--Sobic003G061700 Sobic005G010000--Sobic008G186900 Sobic005G010000--Sobic010G161400 Sobic005G010000--Sobic009G098900 Sobic005G010000--Sobic004G137200 Sobic005G010000--Sobic002G091200
Octagon: transcription factors


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