Gene annotation
Transcriptome id Sobic.010G065200.1
Synonym Sb10g005620
Functional annotation expressed protein
UniProt C5Z5I0
Pfam -
Panther DB PTHR32254 PTHR32254:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G30993 : Calcineurin-like metallo-phosphoesterase superfamily protein
RAP-DB (Rice) LOC_Os06g08470.1 : expressed protein
MaizeGDB (Corn) Zm00025a049787
Brachypodium KQK19284 , PNT76354 , PNT76353 , PNT76351
Barley HORVU7Hr1G030090.8 , HORVU7Hr1G030090.16
Wheat TraesCS7B02G050000 , TraesCS7A02G147000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
2 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1
3 Sobic.001G505600 DENN domain containing protein, expressed -
4 Sobic.010G171000 phospholipid-transporting ATPase 4, putative, expressed K01530: phospholipid-translocating ATPase
5 Sobic.010G133400 pantothenate kinase 4, putative, expressed -
6 Sobic.K043400 dnaJ homolog subfamily C member, putative, expressed K09523: DnaJ homolog subfamily C member 3
7 Sobic.005G070400 protein kinase family protein, putative, expressed -
8 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
9 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
10 Sobic.004G077300 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
11 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
12 Sobic.002G007800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
13 Sobic.004G263500 DnaK family protein, putative, expressed K09486: hypoxia up-regulated 1
14 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
15 Sobic.010G122100 AGC_PVPK_like_kin82y.13 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
16 Sobic.003G404100 CBS domain-containing protein, putative, expressed -
17 Sobic.007G111300 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
18 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
19 Sobic.001G356100 GPI-anchored wall transfer protein 1, putative, expressed K05283: glucosaminylphosphatidylinositol acyltransferase
20 Sobic.002G304700 RFT1, putative, expressed K06316: oligosaccharide translocation protein RFT1


Gene co-expression network
sample Sobic010G065200 Sobic010G065200 Sobic001G378800 Sobic001G378800 Sobic010G065200--Sobic001G378800 Sobic003G372200 Sobic003G372200 Sobic010G065200--Sobic003G372200 Sobic001G505600 Sobic001G505600 Sobic010G065200--Sobic001G505600 Sobic010G171000 Sobic010G171000 Sobic010G065200--Sobic010G171000 Sobic010G133400 Sobic010G133400 Sobic010G065200--Sobic010G133400 SobicK043400 SobicK043400 Sobic010G065200--SobicK043400 Sobic005G070400 Sobic005G070400 Sobic010G065200--Sobic005G070400 Sobic006G232800 Sobic006G232800 Sobic010G065200--Sobic006G232800 Sobic010G160300 Sobic010G160300 Sobic010G065200--Sobic010G160300 Sobic001G378800--Sobic006G232800 Sobic003G394500 Sobic003G394500 Sobic001G378800--Sobic003G394500 Sobic001G047600 Sobic001G047600 Sobic001G378800--Sobic001G047600 Sobic004G077300 Sobic004G077300 Sobic001G378800--Sobic004G077300 Sobic001G356200 Sobic001G356200 Sobic001G378800--Sobic001G356200 Sobic001G378800--Sobic003G372200 Sobic001G424800 Sobic001G424800 Sobic001G378800--Sobic001G424800 Sobic003G260600 Sobic003G260600 Sobic001G378800--Sobic003G260600 Sobic004G350700 Sobic004G350700 Sobic001G378800--Sobic004G350700 Sobic003G372200--Sobic001G378800 Sobic004G284800 Sobic004G284800 Sobic003G372200--Sobic004G284800 Sobic003G201500 Sobic003G201500 Sobic003G372200--Sobic003G201500 Sobic003G372200--Sobic003G260600 Sobic003G089100 Sobic003G089100 Sobic003G372200--Sobic003G089100 Sobic002G420600 Sobic002G420600 Sobic003G372200--Sobic002G420600 Sobic002G167100 Sobic002G167100 Sobic003G372200--Sobic002G167100 Sobic003G372200--Sobic006G232800 Sobic002G362500 Sobic002G362500 Sobic003G372200--Sobic002G362500 Sobic001G505600--Sobic003G372200 Sobic001G505600--Sobic001G378800 Sobic001G505600--Sobic010G065200 Sobic001G385000 Sobic001G385000 Sobic001G505600--Sobic001G385000 Sobic001G486900 Sobic001G486900 Sobic001G505600--Sobic001G486900 Sobic002G070300 Sobic002G070300 Sobic001G505600--Sobic002G070300 Sobic008G132200 Sobic008G132200 Sobic001G505600--Sobic008G132200 Sobic001G505600--Sobic001G424800 Sobic001G505600--Sobic003G394500 Sobic001G445500 Sobic001G445500 Sobic010G171000--Sobic001G445500 Sobic010G171000--Sobic010G065200 Sobic008G019532 Sobic008G019532 Sobic010G171000--Sobic008G019532 Sobic001G455000 Sobic001G455000 Sobic010G171000--Sobic001G455000 Sobic001G374000 Sobic001G374000 Sobic010G171000--Sobic001G374000 Sobic002G117600 Sobic002G117600 Sobic010G171000--Sobic002G117600 Sobic010G171000--Sobic010G160300 Sobic001G114200 Sobic001G114200 Sobic010G171000--Sobic001G114200 Sobic003G346400 Sobic003G346400 Sobic010G171000--Sobic003G346400 Sobic003G049200 Sobic003G049200 Sobic010G133400--Sobic003G049200 Sobic007G118500 Sobic007G118500 Sobic010G133400--Sobic007G118500 Sobic010G133400--Sobic001G378800 Sobic008G072500 Sobic008G072500 Sobic010G133400--Sobic008G072500 Sobic004G263500 Sobic004G263500 Sobic010G133400--Sobic004G263500 Sobic001G356100 Sobic001G356100 Sobic010G133400--Sobic001G356100 Sobic010G133400--Sobic003G394500 Sobic008G171400 Sobic008G171400 Sobic010G133400--Sobic008G171400 Sobic002G193500 Sobic002G193500 Sobic010G133400--Sobic002G193500 SobicK043400--Sobic001G378800 SobicK043400--Sobic001G047600 Sobic009G054600 Sobic009G054600 SobicK043400--Sobic009G054600 Sobic002G295700 Sobic002G295700 SobicK043400--Sobic002G295700 SobicK043400--Sobic002G117600 Sobic006G012700 Sobic006G012700 SobicK043400--Sobic006G012700 SobicK043400--Sobic010G065200 Sobic004G093600 Sobic004G093600 SobicK043400--Sobic004G093600 Sobic004G096700 Sobic004G096700 SobicK043400--Sobic004G096700 Sobic005G070400--Sobic003G372200 Sobic005G070400--Sobic010G065200 Sobic005G070400--Sobic001G378800 Sobic005G070400--Sobic001G505600 Sobic005G070400--Sobic010G171000 Sobic005G070400--Sobic006G232800 Sobic010G122100 Sobic010G122100 Sobic005G070400--Sobic010G122100 Sobic008G141600 Sobic008G141600 Sobic005G070400--Sobic008G141600 Sobic001G213666 Sobic001G213666 Sobic005G070400--Sobic001G213666 Sobic006G232800--Sobic001G378800 Sobic006G232800--Sobic001G385000 Sobic006G232800--Sobic003G394500 Sobic001G149000 Sobic001G149000 Sobic006G232800--Sobic001G149000 Sobic010G086300 Sobic010G086300 Sobic006G232800--Sobic010G086300 Sobic001G280500 Sobic001G280500 Sobic006G232800--Sobic001G280500 Sobic002G313100 Sobic002G313100 Sobic006G232800--Sobic002G313100 Sobic002G392400 Sobic002G392400 Sobic006G232800--Sobic002G392400 Sobic006G265800 Sobic006G265800 Sobic006G232800--Sobic006G265800 Sobic002G304700 Sobic002G304700 Sobic010G160300--Sobic002G304700 Sobic010G160300--Sobic001G280500 Sobic005G063200 Sobic005G063200 Sobic010G160300--Sobic005G063200 Sobic010G160300--Sobic001G114200 Sobic001G501900 Sobic001G501900 Sobic010G160300--Sobic001G501900 Sobic010G160300--Sobic004G350700 Sobic002G007800 Sobic002G007800 Sobic010G160300--Sobic002G007800 Sobic003G117800 Sobic003G117800 Sobic010G160300--Sobic003G117800 Sobic010G160300--Sobic001G149000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.