Gene annotation
Transcriptome id Sobic.004G263500.1,Sobic.004G263500.2
Synonym Sb04g030160
Functional annotation DnaK family protein, putative, expressed
UniProt A0A194YRT0 , A0A194YRT1
Pfam PF00012
Panther DB PTHR19375 PTHR19375:SF90
NCBI CDD -
KEGG Orthology K09486; hypoxia up-regulated 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16660 : heat shock protein 70 (Hsp 70) family protein
RAP-DB (Rice) LOC_Os02g48110.1 : DnaK family protein, putative, expressed
MaizeGDB (Corn) Zm00025a021764 , Zm00025a032496
Brachypodium KQK00988
Barley HORVU6Hr1G001950.1 , HORVU7Hr1G015690.2 , HORVU7Hr1G015690.1 , HORVU1Hr1G077070.1 , HORVU1Hr1G077070.2 , HORVU1Hr1G040940.2 , HORVU1Hr1G040940.3 , HORVU1Hr1G040940.1 , HORVU2Hr1G036440.1 , HORVU2Hr1G036440.3 , HORVU2Hr1G036440.2 , HORVU0Hr1G016920.18 , HORVU0Hr1G016920.19 , HORVU0Hr1G016920.16 , HORVU0Hr1G016920.17 , HORVU0Hr1G016920.20 , HORVU4Hr1G078830.1 , HORVU0Hr1G016920.6 , HORVU0Hr1G016920.4 , HORVU0Hr1G016920.5 , HORVU0Hr1G016920.2 , HORVU0Hr1G016920.3 , HORVU0Hr1G016920.1
Wheat TraesCS6A02G276700 , TraesCS6B02G304200 , TraesCS6D02G257000 , TraesCS6D02G257000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G356100 GPI-anchored wall transfer protein 1, putative, expressed K05283: glucosaminylphosphatidylinositol acyltransferase
2 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
3 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
4 Sobic.008G055500 Protein-tyrosine phosphatase domain containing protein, expressed -
5 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
6 Sobic.010G133400 pantothenate kinase 4, putative, expressed -
7 Sobic.004G350700 kelch repeat protein, putative, expressed -
8 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
9 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
10 Sobic.006G012700 expressed protein -
11 Sobic.002G395500 ATP12 ATPase, putative, expressed K07556: ATPeAF2, ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2
12 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
13 Sobic.002G304700 RFT1, putative, expressed K06316: oligosaccharide translocation protein RFT1
14 Sobic.008G097900 protein kinase domain containing protein, expressed -
15 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
16 Sobic.003G409900 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
17 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
18 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
19 Sobic.009G116900 CW-type Zinc Finger, putative, expressed -
20 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25


Gene co-expression network
sample Sobic004G263500 Sobic004G263500 Sobic001G356100 Sobic001G356100 Sobic004G263500--Sobic001G356100 Sobic006G060000 Sobic006G060000 Sobic004G263500--Sobic006G060000 Sobic003G394500 Sobic003G394500 Sobic004G263500--Sobic003G394500 Sobic008G055500 Sobic008G055500 Sobic004G263500--Sobic008G055500 Sobic001G378800 Sobic001G378800 Sobic004G263500--Sobic001G378800 Sobic010G133400 Sobic010G133400 Sobic004G263500--Sobic010G133400 Sobic004G350700 Sobic004G350700 Sobic004G263500--Sobic004G350700 Sobic007G118500 Sobic007G118500 Sobic004G263500--Sobic007G118500 Sobic001G389200 Sobic001G389200 Sobic004G263500--Sobic001G389200 Sobic001G356100--Sobic004G263500 Sobic001G356100--Sobic007G118500 Sobic001G356100--Sobic003G394500 Sobic001G455000 Sobic001G455000 Sobic001G356100--Sobic001G455000 Sobic006G232800 Sobic006G232800 Sobic001G356100--Sobic006G232800 Sobic001G356100--Sobic006G060000 Sobic001G356100--Sobic004G350700 Sobic001G114200 Sobic001G114200 Sobic001G356100--Sobic001G114200 Sobic001G356100--Sobic010G133400 Sobic006G060000--Sobic008G055500 Sobic006G060000--Sobic004G350700 Sobic007G172700 Sobic007G172700 Sobic006G060000--Sobic007G172700 Sobic006G060000--Sobic001G114200 Sobic006G060000--Sobic003G394500 Sobic006G060000--Sobic001G389200 Sobic006G060000--Sobic004G263500 Sobic003G117800 Sobic003G117800 Sobic006G060000--Sobic003G117800 Sobic001G490900 Sobic001G490900 Sobic006G060000--Sobic001G490900 Sobic003G394500--Sobic003G117800 Sobic001G385000 Sobic001G385000 Sobic003G394500--Sobic001G385000 Sobic003G394500--Sobic004G350700 Sobic003G394500--Sobic001G378800 Sobic003G394500--Sobic007G118500 Sobic003G190200 Sobic003G190200 Sobic003G394500--Sobic003G190200 Sobic003G394500--Sobic006G232800 Sobic007G030100 Sobic007G030100 Sobic003G394500--Sobic007G030100 Sobic001G424800 Sobic001G424800 Sobic003G394500--Sobic001G424800 Sobic003G402800 Sobic003G402800 Sobic008G055500--Sobic003G402800 Sobic008G055500--Sobic006G060000 Sobic008G055500--Sobic004G350700 Sobic003G385300 Sobic003G385300 Sobic008G055500--Sobic003G385300 Sobic008G055500--Sobic003G117800 Sobic001G257800 Sobic001G257800 Sobic008G055500--Sobic001G257800 Sobic008G152700 Sobic008G152700 Sobic008G055500--Sobic008G152700 Sobic004G176200 Sobic004G176200 Sobic008G055500--Sobic004G176200 Sobic001G501900 Sobic001G501900 Sobic008G055500--Sobic001G501900 Sobic001G378800--Sobic006G232800 Sobic001G378800--Sobic003G394500 Sobic001G047600 Sobic001G047600 Sobic001G378800--Sobic001G047600 Sobic004G077300 Sobic004G077300 Sobic001G378800--Sobic004G077300 Sobic001G356200 Sobic001G356200 Sobic001G378800--Sobic001G356200 Sobic003G372200 Sobic003G372200 Sobic001G378800--Sobic003G372200 Sobic001G378800--Sobic001G424800 Sobic003G260600 Sobic003G260600 Sobic001G378800--Sobic003G260600 Sobic001G378800--Sobic004G350700 Sobic003G049200 Sobic003G049200 Sobic010G133400--Sobic003G049200 Sobic010G133400--Sobic007G118500 Sobic010G133400--Sobic001G378800 Sobic008G072500 Sobic008G072500 Sobic010G133400--Sobic008G072500 Sobic010G133400--Sobic004G263500 Sobic010G133400--Sobic001G356100 Sobic010G133400--Sobic003G394500 Sobic008G171400 Sobic008G171400 Sobic010G133400--Sobic008G171400 Sobic002G193500 Sobic002G193500 Sobic010G133400--Sobic002G193500 Sobic004G350700--Sobic008G055500 Sobic004G350700--Sobic003G394500 Sobic004G350700--Sobic003G385300 Sobic004G350700--Sobic001G424800 Sobic004G350700--Sobic006G060000 Sobic001G149000 Sobic001G149000 Sobic004G350700--Sobic001G149000 Sobic004G350700--Sobic007G172700 Sobic004G350700--Sobic001G114200 Sobic004G350700--Sobic003G117800 Sobic007G118500--Sobic003G394500 Sobic004G060300 Sobic004G060300 Sobic007G118500--Sobic004G060300 Sobic002G070300 Sobic002G070300 Sobic007G118500--Sobic002G070300 Sobic007G118500--Sobic010G133400 Sobic007G118500--Sobic001G378800 Sobic007G118500--Sobic006G232800 Sobic007G118500--Sobic001G455000 Sobic007G118500--Sobic001G356100 Sobic007G118500--Sobic008G171400 Sobic001G389200--Sobic006G060000 Sobic008G168200 Sobic008G168200 Sobic001G389200--Sobic008G168200 Sobic002G395500 Sobic002G395500 Sobic001G389200--Sobic002G395500 Sobic002G355800 Sobic002G355800 Sobic001G389200--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic001G389200--Sobic004G254800 Sobic004G078700 Sobic004G078700 Sobic001G389200--Sobic004G078700 Sobic001G389200--Sobic007G172700 Sobic010G169900 Sobic010G169900 Sobic001G389200--Sobic010G169900 Sobic009G122500 Sobic009G122500 Sobic001G389200--Sobic009G122500
Octagon: transcription factors


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