Gene annotation
Transcriptome id Sobic.001G455000.1
Synonym Sb01g042750, RSW3, PSL5
Functional annotation glycosyl hydrolase, family 31, putative, expressed
UniProt C5WSR6
Pfam PF13802 PF01055
Panther DB PTHR22762 PTHR22762:SF54
NCBI CDD -
KEGG Orthology K05546; mannosyl-oligosaccharide alpha-1,3-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G63840 : Glycosyl hydrolases family 31 protein
RAP-DB (Rice) LOC_Os03g11720.1 : glycosyl hydrolase, family 31, putative, expressed
MaizeGDB (Corn) Zm00025a001324 , Zm00025a053062
Brachypodium PNT77862 , PNT77863
Barley HORVU4Hr1G067520.2 , HORVU4Hr1G067520.3 , HORVU4Hr1G067520.1 , HORVU4Hr1G067520.4
Wheat TraesCS4B02G244500 , TraesCS4B02G244500 , TraesCS4B02G244500 , TraesCS4D02G244900 , TraesCS4D02G244900 , TraesCS4A02G066900 , TraesCS4A02G066900
Populus PNT28103


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cDNA sequences
Sobic.001G455000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G151200 RNA-binding protein-like, putative, expressed -
2 Sobic.003G397900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed K12667: SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)
3 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
4 Sobic.008G019532 - -
5 Sobic.001G356100 GPI-anchored wall transfer protein 1, putative, expressed K05283: glucosaminylphosphatidylinositol acyltransferase
6 Sobic.003G130900 glucosidase II beta subunit-like domain containing protein, expressed K08288: protein kinase C substrate 80K-H
7 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
8 Sobic.001G445500 coatomer subunit gamma-1, putative, expressed K17267: coatomer subunit gamma
9 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
10 Sobic.004G060300 DNA binding protein, putative, expressed -
11 Sobic.002G322400 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed -
12 Sobic.007G153500 metal cation transporter, putative, expressed K14713: SLC39A7, KE4, solute carrier family 39 (zinc transporter), member 7
13 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
14 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
15 Sobic.010G133400 pantothenate kinase 4, putative, expressed -
16 Sobic.004G263500 DnaK family protein, putative, expressed K09486: hypoxia up-regulated 1
17 Sobic.003G393200 expressed protein -
18 Sobic.010G171000 phospholipid-transporting ATPase 4, putative, expressed K01530: phospholipid-translocating ATPase
19 Sobic.002G193500 malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed K01578: malonyl-CoA decarboxylase
20 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II


Gene co-expression network
sample Sobic001G455000 Sobic001G455000 Sobic004G151200 Sobic004G151200 Sobic001G455000--Sobic004G151200 Sobic003G397900 Sobic003G397900 Sobic001G455000--Sobic003G397900 Sobic007G118500 Sobic007G118500 Sobic001G455000--Sobic007G118500 Sobic008G019532 Sobic008G019532 Sobic001G455000--Sobic008G019532 Sobic001G356100 Sobic001G356100 Sobic001G455000--Sobic001G356100 Sobic003G130900 Sobic003G130900 Sobic001G455000--Sobic003G130900 Sobic001G114200 Sobic001G114200 Sobic001G455000--Sobic001G114200 Sobic001G445500 Sobic001G445500 Sobic001G455000--Sobic001G445500 Sobic003G394500 Sobic003G394500 Sobic001G455000--Sobic003G394500 Sobic004G151200--Sobic001G455000 Sobic004G277400 Sobic004G277400 Sobic004G151200--Sobic004G277400 Sobic004G151200--Sobic003G130900 Sobic004G151200--Sobic003G397900 Sobic003G005900 Sobic003G005900 Sobic004G151200--Sobic003G005900 Sobic001G151600 Sobic001G151600 Sobic004G151200--Sobic001G151600 Sobic004G151200--Sobic001G445500 Sobic005G022100 Sobic005G022100 Sobic004G151200--Sobic005G022100 Sobic006G265600 Sobic006G265600 Sobic004G151200--Sobic006G265600 Sobic003G397900--Sobic001G455000 Sobic003G397900--Sobic006G265600 Sobic001G474400 Sobic001G474400 Sobic003G397900--Sobic001G474400 Sobic003G304400 Sobic003G304400 Sobic003G397900--Sobic003G304400 Sobic002G075900 Sobic002G075900 Sobic003G397900--Sobic002G075900 Sobic003G397900--Sobic001G445500 Sobic003G397900--Sobic001G151600 Sobic001G015400 Sobic001G015400 Sobic003G397900--Sobic001G015400 Sobic010G223400 Sobic010G223400 Sobic003G397900--Sobic010G223400 Sobic007G118500--Sobic003G394500 Sobic004G060300 Sobic004G060300 Sobic007G118500--Sobic004G060300 Sobic002G070300 Sobic002G070300 Sobic007G118500--Sobic002G070300 Sobic010G133400 Sobic010G133400 Sobic007G118500--Sobic010G133400 Sobic001G378800 Sobic001G378800 Sobic007G118500--Sobic001G378800 Sobic006G232800 Sobic006G232800 Sobic007G118500--Sobic006G232800 Sobic007G118500--Sobic001G455000 Sobic007G118500--Sobic001G356100 Sobic008G171400 Sobic008G171400 Sobic007G118500--Sobic008G171400 Sobic008G019532--Sobic001G455000 Sobic002G322400 Sobic002G322400 Sobic008G019532--Sobic002G322400 Sobic010G192600 Sobic010G192600 Sobic008G019532--Sobic010G192600 Sobic010G171000 Sobic010G171000 Sobic008G019532--Sobic010G171000 Sobic008G019532--Sobic001G114200 Sobic001G097900 Sobic001G097900 Sobic008G019532--Sobic001G097900 Sobic002G076500 Sobic002G076500 Sobic008G019532--Sobic002G076500 Sobic008G019532--Sobic001G356100 Sobic005G114800 Sobic005G114800 Sobic008G019532--Sobic005G114800 Sobic004G263500 Sobic004G263500 Sobic001G356100--Sobic004G263500 Sobic001G356100--Sobic007G118500 Sobic001G356100--Sobic003G394500 Sobic001G356100--Sobic001G455000 Sobic001G356100--Sobic006G232800 Sobic006G060000 Sobic006G060000 Sobic001G356100--Sobic006G060000 Sobic004G350700 Sobic004G350700 Sobic001G356100--Sobic004G350700 Sobic001G356100--Sobic001G114200 Sobic001G356100--Sobic010G133400 Sobic005G114500 Sobic005G114500 Sobic003G130900--Sobic005G114500 Sobic003G130900--Sobic001G455000 Sobic003G130900--Sobic003G005900 Sobic003G130900--Sobic001G445500 Sobic003G130900--Sobic004G151200 Sobic003G130900--Sobic006G265600 Sobic001G012900 Sobic001G012900 Sobic003G130900--Sobic001G012900 Sobic002G182000 Sobic002G182000 Sobic003G130900--Sobic002G182000 Sobic005G059500 Sobic005G059500 Sobic003G130900--Sobic005G059500 Sobic001G114200--Sobic004G350700 Sobic001G114200--Sobic006G060000 Sobic010G160300 Sobic010G160300 Sobic001G114200--Sobic010G160300 Sobic003G117800 Sobic003G117800 Sobic001G114200--Sobic003G117800 Sobic001G114200--Sobic003G394500 Sobic006G210700 Sobic006G210700 Sobic001G114200--Sobic006G210700 Sobic001G490900 Sobic001G490900 Sobic001G114200--Sobic001G490900 Sobic007G030100 Sobic007G030100 Sobic001G114200--Sobic007G030100 Sobic007G218600 Sobic007G218600 Sobic001G114200--Sobic007G218600 Sobic003G346400 Sobic003G346400 Sobic001G445500--Sobic003G346400 Sobic001G445500--Sobic001G097900 Sobic001G445500--Sobic001G455000 Sobic001G445500--Sobic003G397900 Sobic006G203300 Sobic006G203300 Sobic001G445500--Sobic006G203300 Sobic001G445500--Sobic010G171000 Sobic001G445500--Sobic003G130900 Sobic001G374000 Sobic001G374000 Sobic001G445500--Sobic001G374000 Sobic001G445500--Sobic005G114800 Sobic003G394500--Sobic003G117800 Sobic001G385000 Sobic001G385000 Sobic003G394500--Sobic001G385000 Sobic003G394500--Sobic004G350700 Sobic003G394500--Sobic001G378800 Sobic003G394500--Sobic007G118500 Sobic003G190200 Sobic003G190200 Sobic003G394500--Sobic003G190200 Sobic003G394500--Sobic006G232800 Sobic003G394500--Sobic007G030100 Sobic001G424800 Sobic001G424800 Sobic003G394500--Sobic001G424800
Octagon: transcription factors


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