Gene annotation
Transcriptome id Sobic.010G171000.1,Sobic.010G171000.2
Synonym Sb10g022370
Functional annotation phospholipid-transporting ATPase 4, putative, expressed
UniProt C5Z4R6
Pfam PF00122 PF12710 PF16209 PF16212
Panther DB PTHR24092 PTHR24092:SF55
NCBI CDD -
KEGG Orthology K01530; phospholipid-translocating ATPase
Gene Ontology GO:0000166; nucleotide binding GO:0016021integral component of membrane GO:0015914phospholipid transport GO:0005524ATP binding GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT1G17500 : ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
RAP-DB (Rice) LOC_Os06g36990.1 : phospholipid-transporting ATPase 4, putative, expressed
MaizeGDB (Corn) Zm00025a050993 , Zm00025a036907 , Zm00025a042304
Brachypodium KQK17942 , PNT75758 , PNT75757
Barley HORVU7Hr1G087590.6 , HORVU7Hr1G087590.7 , HORVU7Hr1G087590.4 , HORVU7Hr1G087590.5 , HORVU7Hr1G087590.2 , HORVU7Hr1G087590.3 , HORVU7Hr1G087590.1 , HORVU7Hr1G087590.8 , HORVU7Hr1G087590.9 , HORVU7Hr1G087590.10
Wheat TraesCS7A02G360700 , TraesCS7A02G360700 , TraesCS7D02G362300 , TraesCS7D02G362300 , TraesCS7B02G267000 , TraesCS7B02G267000 , TraesCS7B02G267000 , TraesCS7B02G267000
Populus PNT53361


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cDNA sequences
Sobic.010G171000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G445500 coatomer subunit gamma-1, putative, expressed K17267: coatomer subunit gamma
2 Sobic.010G065200 expressed protein -
3 Sobic.008G019532 - -
4 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
5 Sobic.001G374000 cation efflux family protein, putative, expressed -
6 Sobic.002G117600 myosin, putative, expressed K10357: myosin V
7 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
8 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
9 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
10 Sobic.001G501900 appr-1-p processing enzyme family protein, putative, expressed -
11 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
12 Sobic.K043400 dnaJ homolog subfamily C member, putative, expressed K09523: DnaJ homolog subfamily C member 3
13 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
14 Sobic.004G263500 DnaK family protein, putative, expressed K09486: hypoxia up-regulated 1
15 Sobic.006G203300 GPR89A, putative, expressed -
16 Sobic.006G222500 expressed protein -
17 Sobic.009G025200 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
18 Sobic.002G007800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
19 Sobic.004G096700 xaa-Pro dipeptidase, putative, expressed K14213: Xaa-Pro dipeptidase
20 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S


Gene co-expression network
sample Sobic010G171000 Sobic010G171000 Sobic001G445500 Sobic001G445500 Sobic010G171000--Sobic001G445500 Sobic010G065200 Sobic010G065200 Sobic010G171000--Sobic010G065200 Sobic008G019532 Sobic008G019532 Sobic010G171000--Sobic008G019532 Sobic001G455000 Sobic001G455000 Sobic010G171000--Sobic001G455000 Sobic001G374000 Sobic001G374000 Sobic010G171000--Sobic001G374000 Sobic002G117600 Sobic002G117600 Sobic010G171000--Sobic002G117600 Sobic010G160300 Sobic010G160300 Sobic010G171000--Sobic010G160300 Sobic001G114200 Sobic001G114200 Sobic010G171000--Sobic001G114200 Sobic003G346400 Sobic003G346400 Sobic010G171000--Sobic003G346400 Sobic001G445500--Sobic003G346400 Sobic001G097900 Sobic001G097900 Sobic001G445500--Sobic001G097900 Sobic001G445500--Sobic001G455000 Sobic003G397900 Sobic003G397900 Sobic001G445500--Sobic003G397900 Sobic006G203300 Sobic006G203300 Sobic001G445500--Sobic006G203300 Sobic001G445500--Sobic010G171000 Sobic003G130900 Sobic003G130900 Sobic001G445500--Sobic003G130900 Sobic001G445500--Sobic001G374000 Sobic005G114800 Sobic005G114800 Sobic001G445500--Sobic005G114800 Sobic001G378800 Sobic001G378800 Sobic010G065200--Sobic001G378800 Sobic003G372200 Sobic003G372200 Sobic010G065200--Sobic003G372200 Sobic001G505600 Sobic001G505600 Sobic010G065200--Sobic001G505600 Sobic010G065200--Sobic010G171000 Sobic010G133400 Sobic010G133400 Sobic010G065200--Sobic010G133400 SobicK043400 SobicK043400 Sobic010G065200--SobicK043400 Sobic005G070400 Sobic005G070400 Sobic010G065200--Sobic005G070400 Sobic006G232800 Sobic006G232800 Sobic010G065200--Sobic006G232800 Sobic010G065200--Sobic010G160300 Sobic008G019532--Sobic001G455000 Sobic002G322400 Sobic002G322400 Sobic008G019532--Sobic002G322400 Sobic010G192600 Sobic010G192600 Sobic008G019532--Sobic010G192600 Sobic008G019532--Sobic010G171000 Sobic008G019532--Sobic001G114200 Sobic008G019532--Sobic001G097900 Sobic002G076500 Sobic002G076500 Sobic008G019532--Sobic002G076500 Sobic001G356100 Sobic001G356100 Sobic008G019532--Sobic001G356100 Sobic008G019532--Sobic005G114800 Sobic004G151200 Sobic004G151200 Sobic001G455000--Sobic004G151200 Sobic001G455000--Sobic003G397900 Sobic007G118500 Sobic007G118500 Sobic001G455000--Sobic007G118500 Sobic001G455000--Sobic008G019532 Sobic001G455000--Sobic001G356100 Sobic001G455000--Sobic003G130900 Sobic001G455000--Sobic001G114200 Sobic001G455000--Sobic001G445500 Sobic003G394500 Sobic003G394500 Sobic001G455000--Sobic003G394500 Sobic001G374000--Sobic001G445500 Sobic001G374000--Sobic010G171000 Sobic001G374000--Sobic001G356100 Sobic001G374000--Sobic010G160300 Sobic009G040250 Sobic009G040250 Sobic001G374000--Sobic009G040250 Sobic001G399700 Sobic001G399700 Sobic001G374000--Sobic001G399700 Sobic001G374000--Sobic001G114200 Sobic002G304700 Sobic002G304700 Sobic001G374000--Sobic002G304700 Sobic001G374000--Sobic006G232800 Sobic008G097900 Sobic008G097900 Sobic002G117600--Sobic008G097900 Sobic003G190200 Sobic003G190200 Sobic002G117600--Sobic003G190200 Sobic002G117600--SobicK043400 Sobic004G077300 Sobic004G077300 Sobic002G117600--Sobic004G077300 Sobic001G501900 Sobic001G501900 Sobic002G117600--Sobic001G501900 Sobic002G117600--Sobic001G378800 Sobic002G117600--Sobic010G171000 Sobic007G172700 Sobic007G172700 Sobic002G117600--Sobic007G172700 Sobic001G411900 Sobic001G411900 Sobic002G117600--Sobic001G411900 Sobic010G160300--Sobic002G304700 Sobic001G280500 Sobic001G280500 Sobic010G160300--Sobic001G280500 Sobic005G063200 Sobic005G063200 Sobic010G160300--Sobic005G063200 Sobic010G160300--Sobic001G114200 Sobic010G160300--Sobic001G501900 Sobic004G350700 Sobic004G350700 Sobic010G160300--Sobic004G350700 Sobic002G007800 Sobic002G007800 Sobic010G160300--Sobic002G007800 Sobic003G117800 Sobic003G117800 Sobic010G160300--Sobic003G117800 Sobic001G149000 Sobic001G149000 Sobic010G160300--Sobic001G149000 Sobic001G114200--Sobic004G350700 Sobic006G060000 Sobic006G060000 Sobic001G114200--Sobic006G060000 Sobic001G114200--Sobic010G160300 Sobic001G114200--Sobic003G117800 Sobic001G114200--Sobic003G394500 Sobic006G210700 Sobic006G210700 Sobic001G114200--Sobic006G210700 Sobic001G490900 Sobic001G490900 Sobic001G114200--Sobic001G490900 Sobic007G030100 Sobic007G030100 Sobic001G114200--Sobic007G030100 Sobic007G218600 Sobic007G218600 Sobic001G114200--Sobic007G218600 Sobic004G254800 Sobic004G254800 Sobic003G346400--Sobic004G254800 Sobic006G021700 Sobic006G021700 Sobic003G346400--Sobic006G021700 Sobic004G060300 Sobic004G060300 Sobic003G346400--Sobic004G060300 Sobic003G394200 Sobic003G394200 Sobic003G346400--Sobic003G394200 Sobic003G346400--Sobic006G203300 Sobic003G346400--Sobic001G445500 Sobic003G209200 Sobic003G209200 Sobic003G346400--Sobic003G209200 Sobic001G161700 Sobic001G161700 Sobic003G346400--Sobic001G161700 Sobic001G012900 Sobic001G012900 Sobic003G346400--Sobic001G012900
Octagon: transcription factors


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