Gene annotation
Transcriptome id Sobic.006G203300.1
Synonym Sb06g027460, GTG1
Functional annotation GPR89A, putative, expressed
UniProt A0A1B6PN16
Pfam PF12537 PF12430
Panther DB PTHR15948
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G64990 : GPCR-type G protein 1
RAP-DB (Rice) LOC_Os04g51180.1 : GPR89A, putative, expressed
MaizeGDB (Corn) Zm00025a056941 , Zm00025a009933
Brachypodium KQJ84395
Barley HORVU2Hr1G101760.11 , HORVU2Hr1G101760.10 , HORVU2Hr1G101760.13 , HORVU2Hr1G101760.12 , HORVU2Hr1G101760.9 , HORVU2Hr1G101760.5 , HORVU2Hr1G101760.4 , HORVU2Hr1G101760.7 , HORVU2Hr1G101760.6 , HORVU2Hr1G101760.1 , HORVU2Hr1G101760.3 , HORVU2Hr1G101760.8 , HORVU2Hr1G101760.2
Wheat TraesCS2B02G458500 , TraesCS2A02G438900 , TraesCS2D02G435300
Populus -


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cDNA sequences
Sobic.006G203300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
2 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
3 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
4 Sobic.004G236200 SEC6, putative, expressed K06110: EXOC3, exocyst complex component 3
5 Sobic.001G445500 coatomer subunit gamma-1, putative, expressed K17267: coatomer subunit gamma
6 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
7 Sobic.001G308400 expressed protein -
8 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
9 Sobic.003G036500 fruit protein PKIWI502, putative, expressed -
10 Sobic.009G166600 nucleoside-triphosphatase, putative, expressed -
11 Sobic.009G122500 expressed protein -
12 Sobic.006G128100 lipase, putative, expressed -
13 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
14 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
15 Sobic.002G301100 PQ loop repeat domain containing protein, expressed K09660: mannose-P-dolichol utilization defect 1
16 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
17 Sobic.004G084500 GPI-anchor transamidase precursor, putative, expressed K05290: GPI-anchor transamidase subunit K
18 Sobic.005G110499 - K14006: protein transport protein SEC23
19 Sobic.006G239400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11366: USP22_27_51, ubiquitin carboxyl-terminal hydrolase 22/27/51
20 Sobic.010G223400 expressed protein -


Gene co-expression network
sample Sobic006G203300 Sobic006G203300 Sobic003G394200 Sobic003G394200 Sobic006G203300--Sobic003G394200 Sobic003G346400 Sobic003G346400 Sobic006G203300--Sobic003G346400 Sobic010G169900 Sobic010G169900 Sobic006G203300--Sobic010G169900 Sobic004G236200 Sobic004G236200 Sobic006G203300--Sobic004G236200 Sobic001G445500 Sobic001G445500 Sobic006G203300--Sobic001G445500 Sobic004G254800 Sobic004G254800 Sobic006G203300--Sobic004G254800 Sobic001G308400 Sobic001G308400 Sobic006G203300--Sobic001G308400 Sobic001G474400 Sobic001G474400 Sobic006G203300--Sobic001G474400 Sobic003G036500 Sobic003G036500 Sobic006G203300--Sobic003G036500 Sobic004G084500 Sobic004G084500 Sobic003G394200--Sobic004G084500 Sobic003G394200--Sobic006G203300 Sobic006G128100 Sobic006G128100 Sobic003G394200--Sobic006G128100 Sobic010G223400 Sobic010G223400 Sobic003G394200--Sobic010G223400 Sobic003G394200--Sobic001G308400 Sobic009G049400 Sobic009G049400 Sobic003G394200--Sobic009G049400 Sobic003G270600 Sobic003G270600 Sobic003G394200--Sobic003G270600 Sobic003G189600 Sobic003G189600 Sobic003G394200--Sobic003G189600 Sobic001G369000 Sobic001G369000 Sobic003G394200--Sobic001G369000 Sobic003G346400--Sobic004G254800 Sobic006G021700 Sobic006G021700 Sobic003G346400--Sobic006G021700 Sobic004G060300 Sobic004G060300 Sobic003G346400--Sobic004G060300 Sobic003G346400--Sobic003G394200 Sobic003G346400--Sobic006G203300 Sobic003G346400--Sobic001G445500 Sobic003G209200 Sobic003G209200 Sobic003G346400--Sobic003G209200 Sobic001G161700 Sobic001G161700 Sobic003G346400--Sobic001G161700 Sobic001G012900 Sobic001G012900 Sobic003G346400--Sobic001G012900 Sobic010G169900--Sobic001G308400 Sobic002G079000 Sobic002G079000 Sobic010G169900--Sobic002G079000 Sobic009G128500 Sobic009G128500 Sobic010G169900--Sobic009G128500 Sobic002G355800 Sobic002G355800 Sobic010G169900--Sobic002G355800 Sobic002G227500 Sobic002G227500 Sobic010G169900--Sobic002G227500 Sobic010G169900--Sobic006G128100 Sobic009G194000 Sobic009G194000 Sobic010G169900--Sobic009G194000 Sobic001G389200 Sobic001G389200 Sobic010G169900--Sobic001G389200 Sobic001G490900 Sobic001G490900 Sobic010G169900--Sobic001G490900 Sobic004G236200--Sobic003G270600 Sobic001G056800 Sobic001G056800 Sobic004G236200--Sobic001G056800 Sobic006G077300 Sobic006G077300 Sobic004G236200--Sobic006G077300 Sobic004G228800 Sobic004G228800 Sobic004G236200--Sobic004G228800 Sobic004G236200--Sobic006G203300 Sobic003G427600 Sobic003G427600 Sobic004G236200--Sobic003G427600 Sobic004G236200--Sobic003G394200 Sobic007G205900 Sobic007G205900 Sobic004G236200--Sobic007G205900 Sobic002G156000 Sobic002G156000 Sobic004G236200--Sobic002G156000 Sobic001G445500--Sobic003G346400 Sobic001G097900 Sobic001G097900 Sobic001G445500--Sobic001G097900 Sobic001G455000 Sobic001G455000 Sobic001G445500--Sobic001G455000 Sobic003G397900 Sobic003G397900 Sobic001G445500--Sobic003G397900 Sobic001G445500--Sobic006G203300 Sobic010G171000 Sobic010G171000 Sobic001G445500--Sobic010G171000 Sobic003G130900 Sobic003G130900 Sobic001G445500--Sobic003G130900 Sobic001G374000 Sobic001G374000 Sobic001G445500--Sobic001G374000 Sobic005G114800 Sobic005G114800 Sobic001G445500--Sobic005G114800 Sobic004G254800--Sobic003G346400 Sobic004G254800--Sobic001G389200 Sobic004G078700 Sobic004G078700 Sobic004G254800--Sobic004G078700 Sobic004G254800--Sobic003G394200 Sobic004G254800--Sobic001G161700 Sobic009G122500 Sobic009G122500 Sobic004G254800--Sobic009G122500 Sobic004G254800--Sobic004G060300 Sobic002G395500 Sobic002G395500 Sobic004G254800--Sobic002G395500 Sobic003G394500 Sobic003G394500 Sobic004G254800--Sobic003G394500 Sobic004G265500 Sobic004G265500 Sobic001G308400--Sobic004G265500 Sobic001G308400--Sobic002G227500 SobicK028600 SobicK028600 Sobic001G308400--SobicK028600 Sobic003G043000 Sobic003G043000 Sobic001G308400--Sobic003G043000 Sobic001G308400--Sobic010G169900 Sobic001G308400--Sobic006G128100 Sobic004G357100 Sobic004G357100 Sobic001G308400--Sobic004G357100 Sobic001G156900 Sobic001G156900 Sobic001G308400--Sobic001G156900 Sobic001G308400--Sobic003G394200 Sobic005G110499 Sobic005G110499 Sobic001G474400--Sobic005G110499 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G474400--Sobic001G097900 Sobic005G114500 Sobic005G114500 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic006G265600 Sobic006G265600 Sobic001G474400--Sobic006G265600 Sobic003G036500--Sobic006G203300 Sobic003G036500--Sobic004G254800 Sobic003G036500--Sobic010G169900 Sobic003G036500--Sobic009G122500 Sobic003G409900 Sobic003G409900 Sobic003G036500--Sobic003G409900 Sobic004G263500 Sobic004G263500 Sobic003G036500--Sobic004G263500 Sobic003G036500--Sobic009G128500 Sobic006G060000 Sobic006G060000 Sobic003G036500--Sobic006G060000 Sobic004G100200 Sobic004G100200 Sobic003G036500--Sobic004G100200
Octagon: transcription factors


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