Gene annotation
Transcriptome id Sobic.001G308400.1,Sobic.001G308400.2
Synonym Sb01g030070
Functional annotation expressed protein
UniProt C5WTG6
Pfam PF10474 PF10475
Panther DB PTHR13258 PTHR13258:SF0
NCBI CDD KOG2939; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G27900 : -
RAP-DB (Rice) LOC_Os10g39910.1 : expressed protein
MaizeGDB (Corn) Zm00025a003236
Brachypodium KQJ97693
Barley HORVU1Hr1G053020.9 , HORVU1Hr1G053020.11 , HORVU1Hr1G053020.10 , HORVU1Hr1G053020.13 , HORVU1Hr1G053020.12 , HORVU1Hr1G053020.15 , HORVU1Hr1G053020.14 , HORVU1Hr1G053020.17 , HORVU1Hr1G053020.16 , HORVU1Hr1G053020.19 , HORVU1Hr1G053020.18 , HORVU1Hr1G053020.5 , HORVU1Hr1G053020.4 , HORVU1Hr1G053020.7 , HORVU1Hr1G053020.6 , HORVU1Hr1G053020.1 , HORVU1Hr1G053020.3 , HORVU1Hr1G053020.2 , HORVU1Hr1G053020.8
Wheat TraesCS1A02G206700 , TraesCS1A02G206700 , TraesCS1A02G206700 , TraesCS1B02G220300 , TraesCS1B02G220300 , TraesCS1B02G220300 , TraesCS1B02G220300 , TraesCS1B02G220300 , TraesCS1D02G210000 , TraesCS1D02G210000 , TraesCS1D02G210000 , TraesCS1D02G210000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
2 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
3 Sobic.K028600 expressed protein -
4 Sobic.003G043000 expressed protein -
5 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
6 Sobic.006G128100 lipase, putative, expressed -
7 Sobic.004G357100 expressed protein -
8 Sobic.001G156900 single myb histone, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
10 Sobic.009G122500 expressed protein -
11 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
12 Sobic.009G128500 CBS domain containing protein, expressed K16302: metal transporter CNNM
13 Sobic.005G110499 - K14006: protein transport protein SEC23
14 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
15 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
16 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
17 Sobic.001G030000 FG-GAP repeat-containing protein, putative, expressed -
18 Sobic.003G444800 expressed protein -
19 Sobic.005G114500 growth regulator related protein, putative, expressed -
20 Sobic.009G249700 expressed protein -


Gene co-expression network
sample Sobic001G308400 Sobic001G308400 Sobic004G265500 Sobic004G265500 Sobic001G308400--Sobic004G265500 Sobic002G227500 Sobic002G227500 Sobic001G308400--Sobic002G227500 SobicK028600 SobicK028600 Sobic001G308400--SobicK028600 Sobic003G043000 Sobic003G043000 Sobic001G308400--Sobic003G043000 Sobic010G169900 Sobic010G169900 Sobic001G308400--Sobic010G169900 Sobic006G128100 Sobic006G128100 Sobic001G308400--Sobic006G128100 Sobic004G357100 Sobic004G357100 Sobic001G308400--Sobic004G357100 Sobic001G156900 Sobic001G156900 Sobic001G308400--Sobic001G156900 Sobic003G394200 Sobic003G394200 Sobic001G308400--Sobic003G394200 Sobic004G265500--Sobic003G043000 Sobic003G163200 Sobic003G163200 Sobic004G265500--Sobic003G163200 Sobic004G265500--Sobic001G308400 Sobic004G265500--Sobic004G357100 Sobic010G000800 Sobic010G000800 Sobic004G265500--Sobic010G000800 Sobic002G042600 Sobic002G042600 Sobic004G265500--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic004G265500--Sobic004G053500 Sobic004G265500--SobicK028600 Sobic004G265500--Sobic002G227500 Sobic002G227500--Sobic001G308400 Sobic003G021600 Sobic003G021600 Sobic002G227500--Sobic003G021600 Sobic002G227500--Sobic001G156900 Sobic002G227500--Sobic010G169900 Sobic002G227500--Sobic004G265500 Sobic002G227500--Sobic003G043000 Sobic003G405500 Sobic003G405500 Sobic002G227500--Sobic003G405500 Sobic003G181700 Sobic003G181700 Sobic002G227500--Sobic003G181700 Sobic010G059500 Sobic010G059500 Sobic002G227500--Sobic010G059500 Sobic003G444800 Sobic003G444800 SobicK028600--Sobic003G444800 SobicK028600--Sobic004G357100 SobicK028600--Sobic001G308400 Sobic002G103600 Sobic002G103600 SobicK028600--Sobic002G103600 Sobic007G042400 Sobic007G042400 SobicK028600--Sobic007G042400 Sobic006G116100 Sobic006G116100 SobicK028600--Sobic006G116100 SobicK028600--Sobic003G043000 Sobic006G234700 Sobic006G234700 SobicK028600--Sobic006G234700 Sobic002G063900 Sobic002G063900 SobicK028600--Sobic002G063900 Sobic003G043000--Sobic004G265500 Sobic003G043000--Sobic001G308400 Sobic003G296900 Sobic003G296900 Sobic003G043000--Sobic003G296900 Sobic003G043000--Sobic004G357100 Sobic003G241700 Sobic003G241700 Sobic003G043000--Sobic003G241700 Sobic009G228000 Sobic009G228000 Sobic003G043000--Sobic009G228000 Sobic003G043000--SobicK028600 Sobic003G043000--Sobic003G163200 Sobic003G043000--Sobic002G227500 Sobic010G169900--Sobic001G308400 Sobic002G079000 Sobic002G079000 Sobic010G169900--Sobic002G079000 Sobic009G128500 Sobic009G128500 Sobic010G169900--Sobic009G128500 Sobic002G355800 Sobic002G355800 Sobic010G169900--Sobic002G355800 Sobic010G169900--Sobic002G227500 Sobic010G169900--Sobic006G128100 Sobic009G194000 Sobic009G194000 Sobic010G169900--Sobic009G194000 Sobic001G389200 Sobic001G389200 Sobic010G169900--Sobic001G389200 Sobic001G490900 Sobic001G490900 Sobic010G169900--Sobic001G490900 Sobic006G128100--Sobic003G394200 Sobic006G128100--Sobic001G308400 Sobic006G128100--Sobic002G355800 Sobic006G128100--Sobic010G169900 Sobic006G128100--Sobic002G079000 Sobic010G213500 Sobic010G213500 Sobic006G128100--Sobic010G213500 Sobic003G189600 Sobic003G189600 Sobic006G128100--Sobic003G189600 Sobic003G346400 Sobic003G346400 Sobic006G128100--Sobic003G346400 Sobic006G210700 Sobic006G210700 Sobic006G128100--Sobic006G210700 Sobic004G357100--SobicK028600 Sobic004G357100--Sobic003G444800 Sobic004G357100--Sobic002G063900 Sobic003G152400 Sobic003G152400 Sobic004G357100--Sobic003G152400 Sobic004G357100--Sobic003G043000 Sobic004G357100--Sobic004G265500 Sobic004G357100--Sobic001G308400 Sobic004G357100--Sobic007G042400 Sobic004G357100--Sobic006G234700 Sobic009G122500 Sobic009G122500 Sobic001G156900--Sobic009G122500 Sobic002G119600 Sobic002G119600 Sobic001G156900--Sobic002G119600 Sobic001G156900--Sobic001G308400 Sobic001G156900--Sobic002G227500 Sobic004G122900 Sobic004G122900 Sobic001G156900--Sobic004G122900 Sobic001G335000 Sobic001G335000 Sobic001G156900--Sobic001G335000 Sobic001G156900--Sobic010G169900 Sobic001G156900--Sobic003G181700 Sobic005G110499 Sobic005G110499 Sobic001G156900--Sobic005G110499 Sobic004G084500 Sobic004G084500 Sobic003G394200--Sobic004G084500 Sobic006G203300 Sobic006G203300 Sobic003G394200--Sobic006G203300 Sobic003G394200--Sobic006G128100 Sobic010G223400 Sobic010G223400 Sobic003G394200--Sobic010G223400 Sobic003G394200--Sobic001G308400 Sobic009G049400 Sobic009G049400 Sobic003G394200--Sobic009G049400 Sobic003G270600 Sobic003G270600 Sobic003G394200--Sobic003G270600 Sobic003G394200--Sobic003G189600 Sobic001G369000 Sobic001G369000 Sobic003G394200--Sobic001G369000
Octagon: transcription factors


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