Gene annotation
Transcriptome id Sobic.003G444800.1,Sobic.003G444800.5
Synonym
Functional annotation expressed protein
UniProt A0A1W0W1M1 , A0A1W0W1Q7
Pfam -
Panther DB PTHR34958 PTHR34958:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12590 : -
RAP-DB (Rice) LOC_Os01g74310.1 : expressed protein
MaizeGDB (Corn) Zm00025a039036 , Zm00025a025820
Brachypodium KQK11782
Barley HORVU3Hr1G116150.7 , HORVU3Hr1G116150.6 , HORVU3Hr1G116150.5 , HORVU3Hr1G116150.4 , HORVU3Hr1G116150.3 , HORVU3Hr1G116150.2 , HORVU3Hr1G116150.1 , HORVU3Hr1G116150.9 , HORVU3Hr1G116150.8 , HORVU3Hr1G116150.19 , HORVU3Hr1G116150.18 , HORVU3Hr1G116150.17 , HORVU3Hr1G116150.16 , HORVU3Hr1G116150.15 , HORVU3Hr1G116150.14 , HORVU3Hr1G116150.13 , HORVU3Hr1G116150.12 , HORVU3Hr1G116150.11 , HORVU3Hr1G116150.10 , HORVU3Hr1G116150.20
Wheat TraesCS3B02G602200 , TraesCS3D02G537100 , TraesCS3A02G531800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.K028600 expressed protein -
2 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
3 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
4 Sobic.004G357100 expressed protein -
5 Sobic.007G042400 HEAT repeat family protein, putative, expressed -
6 Sobic.002G112700 glutamine-dependent NAD, putative, expressed K01950: E6.3.5.1, NADSYN1, QNS1, NAD+ synthase (glutamine-hydrolysing)
7 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
8 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
9 Sobic.001G376200 auxin response factor, putative, expressed -
10 Sobic.007G103600 protein of unknown function DUF1296 domain containing protein, expressed -
11 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
12 Sobic.002G408200 sec8 exocyst complex component specific domain containing protein, expressed K06111: EXOC4, exocyst complex component 4
13 Sobic.002G405800 PHD-finger family protein, expressed -
14 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
15 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
16 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
17 Sobic.003G043000 expressed protein -
18 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
19 Sobic.001G376100 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@OsFBX72 - F-box domain containing protein, expressed -
20 Sobic.005G138300 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1


Gene co-expression network
sample Sobic003G444800 Sobic003G444800 SobicK028600 SobicK028600 Sobic003G444800--SobicK028600 Sobic003G059750 Sobic003G059750 Sobic003G444800--Sobic003G059750 Sobic002G103600 Sobic002G103600 Sobic003G444800--Sobic002G103600 Sobic004G357100 Sobic004G357100 Sobic003G444800--Sobic004G357100 Sobic007G042400 Sobic007G042400 Sobic003G444800--Sobic007G042400 Sobic002G112700 Sobic002G112700 Sobic003G444800--Sobic002G112700 Sobic010G279450 Sobic010G279450 Sobic003G444800--Sobic010G279450 Sobic006G234700 Sobic006G234700 Sobic003G444800--Sobic006G234700 Sobic001G376200 Sobic001G376200 Sobic003G444800--Sobic001G376200 SobicK028600--Sobic003G444800 SobicK028600--Sobic004G357100 Sobic001G308400 Sobic001G308400 SobicK028600--Sobic001G308400 SobicK028600--Sobic002G103600 SobicK028600--Sobic007G042400 Sobic006G116100 Sobic006G116100 SobicK028600--Sobic006G116100 Sobic003G043000 Sobic003G043000 SobicK028600--Sobic003G043000 SobicK028600--Sobic006G234700 Sobic002G063900 Sobic002G063900 SobicK028600--Sobic002G063900 Sobic007G103600 Sobic007G103600 Sobic003G059750--Sobic007G103600 Sobic005G207500 Sobic005G207500 Sobic003G059750--Sobic005G207500 Sobic005G112300 Sobic005G112300 Sobic003G059750--Sobic005G112300 Sobic003G059750--Sobic010G279450 Sobic002G404700 Sobic002G404700 Sobic003G059750--Sobic002G404700 Sobic003G059750--Sobic003G444800 Sobic001G311500 Sobic001G311500 Sobic003G059750--Sobic001G311500 Sobic002G405800 Sobic002G405800 Sobic003G059750--Sobic002G405800 Sobic002G071500 Sobic002G071500 Sobic003G059750--Sobic002G071500 Sobic002G103600--Sobic003G444800 Sobic005G013200 Sobic005G013200 Sobic002G103600--Sobic005G013200 Sobic002G103600--SobicK028600 Sobic002G103600--Sobic003G059750 Sobic002G103600--Sobic001G311500 Sobic009G247400 Sobic009G247400 Sobic002G103600--Sobic009G247400 Sobic002G408200 Sobic002G408200 Sobic002G103600--Sobic002G408200 Sobic008G028700 Sobic008G028700 Sobic002G103600--Sobic008G028700 Sobic002G103600--Sobic007G042400 Sobic004G357100--SobicK028600 Sobic004G357100--Sobic003G444800 Sobic004G357100--Sobic002G063900 Sobic003G152400 Sobic003G152400 Sobic004G357100--Sobic003G152400 Sobic004G357100--Sobic003G043000 Sobic004G265500 Sobic004G265500 Sobic004G357100--Sobic004G265500 Sobic004G357100--Sobic001G308400 Sobic004G357100--Sobic007G042400 Sobic004G357100--Sobic006G234700 Sobic007G042400--Sobic003G444800 Sobic007G042400--Sobic006G234700 Sobic009G084900 Sobic009G084900 Sobic007G042400--Sobic009G084900 Sobic007G042400--Sobic003G152400 Sobic010G059500 Sobic010G059500 Sobic007G042400--Sobic010G059500 Sobic007G042400--Sobic009G247400 Sobic007G042400--Sobic003G059750 Sobic007G042400--Sobic004G357100 Sobic007G042400--Sobic001G311500 Sobic001G114000 Sobic001G114000 Sobic002G112700--Sobic001G114000 Sobic007G218000 Sobic007G218000 Sobic002G112700--Sobic007G218000 Sobic007G008900 Sobic007G008900 Sobic002G112700--Sobic007G008900 Sobic002G112700--Sobic003G059750 Sobic002G112700--Sobic002G405800 Sobic002G112700--Sobic003G444800 Sobic004G072100 Sobic004G072100 Sobic002G112700--Sobic004G072100 Sobic007G011300 Sobic007G011300 Sobic002G112700--Sobic007G011300 Sobic009G166300 Sobic009G166300 Sobic002G112700--Sobic009G166300 Sobic010G279450--Sobic005G112300 Sobic010G139000 Sobic010G139000 Sobic010G279450--Sobic010G139000 Sobic010G279450--Sobic002G405800 Sobic004G314000 Sobic004G314000 Sobic010G279450--Sobic004G314000 Sobic010G279450--Sobic003G059750 Sobic010G279450--Sobic008G028700 Sobic001G363500 Sobic001G363500 Sobic010G279450--Sobic001G363500 Sobic004G009600 Sobic004G009600 Sobic010G279450--Sobic004G009600 Sobic010G247800 Sobic010G247800 Sobic010G279450--Sobic010G247800 Sobic004G096400 Sobic004G096400 Sobic006G234700--Sobic004G096400 Sobic006G234700--Sobic010G059500 Sobic009G192300 Sobic009G192300 Sobic006G234700--Sobic009G192300 Sobic006G234700--Sobic007G042400 Sobic006G234700--Sobic003G444800 Sobic001G493200 Sobic001G493200 Sobic006G234700--Sobic001G493200 Sobic006G234700--Sobic009G084900 Sobic001G433800 Sobic001G433800 Sobic006G234700--Sobic001G433800 Sobic002G083500 Sobic002G083500 Sobic006G234700--Sobic002G083500 Sobic001G376200--Sobic003G444800 Sobic002G016200 Sobic002G016200 Sobic001G376200--Sobic002G016200 Sobic001G376200--SobicK028600 Sobic007G147400 Sobic007G147400 Sobic001G376200--Sobic007G147400 Sobic001G376200--Sobic009G192300 Sobic001G376200--Sobic001G308400 Sobic010G169900 Sobic010G169900 Sobic001G376200--Sobic010G169900 Sobic010G226000 Sobic010G226000 Sobic001G376200--Sobic010G226000 Sobic001G376200--Sobic002G103600
Octagon: transcription factors


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