Gene annotation
Transcriptome id Sobic.001G376100.1
Synonym Sb01g035710
Functional annotation expressed high in CK60 (an inefficient nitrogen user) (PubMedID : 28697783)
OsFBX72 - F-box domain containing protein, expressed
UniProt C5X0N8
Pfam PF00646
Panther DB PTHR32153 PTHR32153:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G51530 : F-box/RNI-like/FBD-like domains-containing protein
RAP-DB (Rice) LOC_Os02g57890.1 : OsFBX72 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ87801 , KQJ87800
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G376100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G444800 expressed protein -
2 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
3 Sobic.002G112700 glutamine-dependent NAD, putative, expressed K01950: E6.3.5.1, NADSYN1, QNS1, NAD+ synthase (glutamine-hydrolysing)
4 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
5 Sobic.007G008900 SAC domain containing protein, putative, expressed -
6 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
7 Sobic.001G114000 expressed protein -
8 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
9 Sobic.002G408200 sec8 exocyst complex component specific domain containing protein, expressed K06111: EXOC4, exocyst complex component 4
10 Sobic.003G039900 OsFBDUF1 - F-box and DUF domain containing protein, expressed -
11 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
12 Sobic.005G138300 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
13 Sobic.007G042400 HEAT repeat family protein, putative, expressed -
14 Sobic.008G162900 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
15 Sobic.003G052200 G-patch domain containing protein, expressed -
16 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
17 Sobic.004G067700 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
18 Sobic.005G013200 BAH domain containing protein, expressed -
19 Sobic.006G215900 OsFBX172 - F-box domain containing protein, expressed -
20 Sobic.K028600 expressed protein -


Gene co-expression network
sample Sobic001G376100 Sobic001G376100 Sobic003G444800 Sobic003G444800 Sobic001G376100--Sobic003G444800 Sobic002G103600 Sobic002G103600 Sobic001G376100--Sobic002G103600 Sobic002G112700 Sobic002G112700 Sobic001G376100--Sobic002G112700 Sobic006G234700 Sobic006G234700 Sobic001G376100--Sobic006G234700 Sobic007G008900 Sobic007G008900 Sobic001G376100--Sobic007G008900 Sobic009G247400 Sobic009G247400 Sobic001G376100--Sobic009G247400 Sobic001G114000 Sobic001G114000 Sobic001G376100--Sobic001G114000 Sobic010G247800 Sobic010G247800 Sobic001G376100--Sobic010G247800 Sobic002G408200 Sobic002G408200 Sobic001G376100--Sobic002G408200 SobicK028600 SobicK028600 Sobic003G444800--SobicK028600 Sobic003G059750 Sobic003G059750 Sobic003G444800--Sobic003G059750 Sobic003G444800--Sobic002G103600 Sobic004G357100 Sobic004G357100 Sobic003G444800--Sobic004G357100 Sobic007G042400 Sobic007G042400 Sobic003G444800--Sobic007G042400 Sobic003G444800--Sobic002G112700 Sobic010G279450 Sobic010G279450 Sobic003G444800--Sobic010G279450 Sobic003G444800--Sobic006G234700 Sobic001G376200 Sobic001G376200 Sobic003G444800--Sobic001G376200 Sobic002G103600--Sobic003G444800 Sobic005G013200 Sobic005G013200 Sobic002G103600--Sobic005G013200 Sobic002G103600--SobicK028600 Sobic002G103600--Sobic003G059750 Sobic001G311500 Sobic001G311500 Sobic002G103600--Sobic001G311500 Sobic002G103600--Sobic009G247400 Sobic002G103600--Sobic002G408200 Sobic008G028700 Sobic008G028700 Sobic002G103600--Sobic008G028700 Sobic002G103600--Sobic007G042400 Sobic002G112700--Sobic001G114000 Sobic007G218000 Sobic007G218000 Sobic002G112700--Sobic007G218000 Sobic002G112700--Sobic007G008900 Sobic002G112700--Sobic003G059750 Sobic002G405800 Sobic002G405800 Sobic002G112700--Sobic002G405800 Sobic002G112700--Sobic003G444800 Sobic004G072100 Sobic004G072100 Sobic002G112700--Sobic004G072100 Sobic007G011300 Sobic007G011300 Sobic002G112700--Sobic007G011300 Sobic009G166300 Sobic009G166300 Sobic002G112700--Sobic009G166300 Sobic004G096400 Sobic004G096400 Sobic006G234700--Sobic004G096400 Sobic010G059500 Sobic010G059500 Sobic006G234700--Sobic010G059500 Sobic009G192300 Sobic009G192300 Sobic006G234700--Sobic009G192300 Sobic006G234700--Sobic007G042400 Sobic006G234700--Sobic003G444800 Sobic001G493200 Sobic001G493200 Sobic006G234700--Sobic001G493200 Sobic009G084900 Sobic009G084900 Sobic006G234700--Sobic009G084900 Sobic001G433800 Sobic001G433800 Sobic006G234700--Sobic001G433800 Sobic002G083500 Sobic002G083500 Sobic006G234700--Sobic002G083500 Sobic001G451400 Sobic001G451400 Sobic007G008900--Sobic001G451400 Sobic007G008900--Sobic002G112700 Sobic007G008900--Sobic001G114000 Sobic007G008900--Sobic007G011300 Sobic007G008900--Sobic003G059750 Sobic004G067700 Sobic004G067700 Sobic007G008900--Sobic004G067700 Sobic007G008900--Sobic002G408200 Sobic007G217000 Sobic007G217000 Sobic007G008900--Sobic007G217000 Sobic001G155000 Sobic001G155000 Sobic007G008900--Sobic001G155000 Sobic009G247400--Sobic001G311500 Sobic009G247400--Sobic010G279450 Sobic009G260500 Sobic009G260500 Sobic009G247400--Sobic009G260500 Sobic004G009600 Sobic004G009600 Sobic009G247400--Sobic004G009600 Sobic001G214600 Sobic001G214600 Sobic009G247400--Sobic001G214600 Sobic001G363500 Sobic001G363500 Sobic009G247400--Sobic001G363500 Sobic001G219600 Sobic001G219600 Sobic009G247400--Sobic001G219600 Sobic002G317200 Sobic002G317200 Sobic009G247400--Sobic002G317200 Sobic004G314000 Sobic004G314000 Sobic009G247400--Sobic004G314000 Sobic001G114000--Sobic007G217000 Sobic001G114000--Sobic002G112700 Sobic001G065000 Sobic001G065000 Sobic001G114000--Sobic001G065000 Sobic001G114000--Sobic004G067700 Sobic001G114000--Sobic009G166300 Sobic008G047800 Sobic008G047800 Sobic001G114000--Sobic008G047800 Sobic001G114000--Sobic004G072100 Sobic005G118600 Sobic005G118600 Sobic001G114000--Sobic005G118600 Sobic009G126400 Sobic009G126400 Sobic001G114000--Sobic009G126400 Sobic010G206900 Sobic010G206900 Sobic010G247800--Sobic010G206900 Sobic009G165700 Sobic009G165700 Sobic010G247800--Sobic009G165700 Sobic002G411600 Sobic002G411600 Sobic010G247800--Sobic002G411600 Sobic003G422500 Sobic003G422500 Sobic010G247800--Sobic003G422500 Sobic009G191000 Sobic009G191000 Sobic010G247800--Sobic009G191000 Sobic001G002000 Sobic001G002000 Sobic010G247800--Sobic001G002000 Sobic010G247800--Sobic001G363500 Sobic004G291900 Sobic004G291900 Sobic010G247800--Sobic004G291900 Sobic010G247800--Sobic002G405800 Sobic002G408200--Sobic008G028700 Sobic002G408200--Sobic005G013200 Sobic002G408200--Sobic002G103600 Sobic002G408200--Sobic007G008900 Sobic003G052200 Sobic003G052200 Sobic002G408200--Sobic003G052200 Sobic001G161800 Sobic001G161800 Sobic002G408200--Sobic001G161800 Sobic002G408200--Sobic010G279450 Sobic002G408200--Sobic003G059750 Sobic002G408200--Sobic001G451400
Octagon: transcription factors


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