Gene annotation
Transcriptome id Sobic.005G013200.1
Synonym Sb05g001150
Functional annotation BAH domain containing protein, expressed
UniProt C5Y3G9
Pfam PF01426
Panther DB PTHR12505 PTHR12505:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003682; chromatin binding


Orthologs (automatic annotation)
TAIR AT5G11470 : bromo-adjacent homology (BAH) domain-containing protein
RAP-DB (Rice) LOC_Os01g42460.1 : BAH domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033304
Brachypodium KQK15256 , PNT74763
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G013200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
2 Sobic.010G129200 - -
3 Sobic.008G162900 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
4 Sobic.001G407200 SacI homology domain containing protein, expressed -
5 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
6 Sobic.002G408200 sec8 exocyst complex component specific domain containing protein, expressed K06111: EXOC4, exocyst complex component 4
7 Sobic.008G028700 SET domain containing protein, expressed -
8 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
9 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
10 Sobic.001G176200 FHA domain containing protein, putative, expressed K13216: PPP1R8, nuclear inhibitor of protein phosphatase 1
11 Sobic.004G219100 phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed K03859: PIGC, phosphatidylinositol N-acetylglucosaminyltransferase subunit C
12 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein
13 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
14 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
15 Sobic.003G052200 G-patch domain containing protein, expressed -
16 Sobic.008G173100 actin, putative, expressed K11662: ACTR6, actin-related protein 6
17 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
18 Sobic.002G320500 MYB family transcription factor, putative, expressed -
19 Sobic.004G039700 OsFBX188 - F-box domain containing protein, expressed -
20 Sobic.002G357700 phospholipid-transporting ATPase 2, putative, expressed K01530: phospholipid-translocating ATPase


Gene co-expression network
sample Sobic005G013200 Sobic005G013200 Sobic002G103600 Sobic002G103600 Sobic005G013200--Sobic002G103600 Sobic010G129200 Sobic010G129200 Sobic005G013200--Sobic010G129200 Sobic008G162900 Sobic008G162900 Sobic005G013200--Sobic008G162900 Sobic001G407200 Sobic001G407200 Sobic005G013200--Sobic001G407200 Sobic001G222500 Sobic001G222500 Sobic005G013200--Sobic001G222500 Sobic002G408200 Sobic002G408200 Sobic005G013200--Sobic002G408200 Sobic008G028700 Sobic008G028700 Sobic005G013200--Sobic008G028700 Sobic001G251700 Sobic001G251700 Sobic005G013200--Sobic001G251700 Sobic004G084300 Sobic004G084300 Sobic005G013200--Sobic004G084300 Sobic003G444800 Sobic003G444800 Sobic002G103600--Sobic003G444800 Sobic002G103600--Sobic005G013200 SobicK028600 SobicK028600 Sobic002G103600--SobicK028600 Sobic003G059750 Sobic003G059750 Sobic002G103600--Sobic003G059750 Sobic001G311500 Sobic001G311500 Sobic002G103600--Sobic001G311500 Sobic009G247400 Sobic009G247400 Sobic002G103600--Sobic009G247400 Sobic002G103600--Sobic002G408200 Sobic002G103600--Sobic008G028700 Sobic007G042400 Sobic007G042400 Sobic002G103600--Sobic007G042400 Sobic005G045300 Sobic005G045300 Sobic010G129200--Sobic005G045300 Sobic010G129200--Sobic005G013200 Sobic009G126400 Sobic009G126400 Sobic010G129200--Sobic009G126400 Sobic008G024600 Sobic008G024600 Sobic010G129200--Sobic008G024600 Sobic006G209850 Sobic006G209850 Sobic010G129200--Sobic006G209850 Sobic010G129200--Sobic001G407200 Sobic002G053000 Sobic002G053000 Sobic010G129200--Sobic002G053000 Sobic010G277500 Sobic010G277500 Sobic010G129200--Sobic010G277500 Sobic010G136600 Sobic010G136600 Sobic010G129200--Sobic010G136600 Sobic003G184699 Sobic003G184699 Sobic008G162900--Sobic003G184699 Sobic008G162900--Sobic009G126400 Sobic008G047800 Sobic008G047800 Sobic008G162900--Sobic008G047800 Sobic008G162900--Sobic001G407200 Sobic008G162900--Sobic005G013200 Sobic003G052200 Sobic003G052200 Sobic008G162900--Sobic003G052200 Sobic006G216800 Sobic006G216800 Sobic008G162900--Sobic006G216800 Sobic008G162900--Sobic001G222500 Sobic002G343901 Sobic002G343901 Sobic008G162900--Sobic002G343901 Sobic009G210500 Sobic009G210500 Sobic001G407200--Sobic009G210500 Sobic001G407200--Sobic008G162900 Sobic001G407200--Sobic005G013200 Sobic002G144933 Sobic002G144933 Sobic001G407200--Sobic002G144933 Sobic001G407200--Sobic010G129200 Sobic001G407200--Sobic010G277500 Sobic001G407200--Sobic009G126400 Sobic001G407200--Sobic004G084300 Sobic001G407200--Sobic008G047800 Sobic001G222500--Sobic004G084300 Sobic001G222500--Sobic008G047800 Sobic001G155000 Sobic001G155000 Sobic001G222500--Sobic001G155000 Sobic002G310200 Sobic002G310200 Sobic001G222500--Sobic002G310200 Sobic001G222500--Sobic009G126400 Sobic009G040600 Sobic009G040600 Sobic001G222500--Sobic009G040600 Sobic002G006900 Sobic002G006900 Sobic001G222500--Sobic002G006900 Sobic001G222500--Sobic003G052200 Sobic007G096000 Sobic007G096000 Sobic001G222500--Sobic007G096000 Sobic002G408200--Sobic008G028700 Sobic002G408200--Sobic005G013200 Sobic002G408200--Sobic002G103600 Sobic007G008900 Sobic007G008900 Sobic002G408200--Sobic007G008900 Sobic002G408200--Sobic003G052200 Sobic001G161800 Sobic001G161800 Sobic002G408200--Sobic001G161800 Sobic010G279450 Sobic010G279450 Sobic002G408200--Sobic010G279450 Sobic002G408200--Sobic003G059750 Sobic001G451400 Sobic001G451400 Sobic002G408200--Sobic001G451400 Sobic008G028700--Sobic010G279450 Sobic008G028700--Sobic009G040600 Sobic004G009600 Sobic004G009600 Sobic008G028700--Sobic004G009600 Sobic004G258700 Sobic004G258700 Sobic008G028700--Sobic004G258700 Sobic007G065400 Sobic007G065400 Sobic008G028700--Sobic007G065400 Sobic010G139000 Sobic010G139000 Sobic008G028700--Sobic010G139000 Sobic008G028700--Sobic002G006900 Sobic002G145101 Sobic002G145101 Sobic008G028700--Sobic002G145101 Sobic008G113100 Sobic008G113100 Sobic008G028700--Sobic008G113100 Sobic007G137900 Sobic007G137900 Sobic001G251700--Sobic007G137900 Sobic003G200200 Sobic003G200200 Sobic001G251700--Sobic003G200200 Sobic002G157300 Sobic002G157300 Sobic001G251700--Sobic002G157300 Sobic002G157000 Sobic002G157000 Sobic001G251700--Sobic002G157000 Sobic006G082600 Sobic006G082600 Sobic001G251700--Sobic006G082600 Sobic002G248400 Sobic002G248400 Sobic001G251700--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic001G251700--Sobic002G320500 Sobic003G268300 Sobic003G268300 Sobic001G251700--Sobic003G268300 Sobic003G220200 Sobic003G220200 Sobic001G251700--Sobic003G220200 Sobic004G084300--Sobic008G047800 Sobic004G084300--Sobic001G222500 Sobic003G241200 Sobic003G241200 Sobic004G084300--Sobic003G241200 Sobic004G084300--Sobic002G006900 Sobic010G236400 Sobic010G236400 Sobic004G084300--Sobic010G236400 Sobic004G084300--Sobic009G040600 Sobic008G067600 Sobic008G067600 Sobic004G084300--Sobic008G067600 Sobic009G065100 Sobic009G065100 Sobic004G084300--Sobic009G065100 Sobic007G132400 Sobic007G132400 Sobic004G084300--Sobic007G132400
Octagon: transcription factors


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