Gene annotation
Transcriptome id Sobic.001G407200.2,Sobic.001G407200.3,Sobic.001G407200.1,Sobic.001G407200.4
Synonym SAC8, ATG5, Sb01g038490
Functional annotation SacI homology domain containing protein, expressed
UniProt A0A1B6QNV4 , A0A1B6QNU7 , A0A1Z5SA15 , A0A1Z5SA19
Pfam PF02383
Panther DB PTHR11200 PTHR11200:SF120
NCBI CDD KOG1889; Putative phosphoinositide phosphatase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51830 : SAC domain-containing protein 8
RAP-DB (Rice) LOC_Os03g18080.2,LOC_Os03g18080.1 : SacI homology domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052672 , Zm00025a052667
Brachypodium PNT77596
Barley HORVU4Hr1G056400.8 , HORVU4Hr1G056400.1 , HORVU4Hr1G056400.16 , HORVU4Hr1G056400.7 , HORVU4Hr1G056400.6 , HORVU4Hr1G056400.14 , HORVU4Hr1G056400.17 , HORVU4Hr1G056400.11 , HORVU4Hr1G056400.10 , HORVU4Hr1G056400.13 , HORVU4Hr1G056400.33 , HORVU4Hr1G056400.32 , HORVU4Hr1G056400.31 , HORVU4Hr1G056400.30 , HORVU4Hr1G056400.37 , HORVU4Hr1G056400.36 , HORVU4Hr1G056400.35 , HORVU4Hr1G056400.34 , HORVU4Hr1G056400.28 , HORVU4Hr1G056400.20 , HORVU4Hr1G056400.21 , HORVU4Hr1G056400.22 , HORVU4Hr1G056400.23 , HORVU4Hr1G056400.24 , HORVU4Hr1G056400.25 , HORVU4Hr1G056400.26 , HORVU4Hr1G056400.27 , HORVU4Hr1G056400.19 , HORVU4Hr1G056400.18 , HORVU4Hr1G056400.15 , HORVU4Hr1G056400.12
Wheat TraesCS4D02G195400 , TraesCS4A02G109500 , TraesCS4A02G109500 , TraesCS4A02G109500 , TraesCS4B02G194700 , TraesCS4A02G109500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G210500 expressed protein -
2 Sobic.008G162900 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
3 Sobic.005G013200 BAH domain containing protein, expressed -
4 Sobic.002G144933 - -
5 Sobic.010G129200 - -
6 Sobic.010G277500 expressed protein -
7 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein
8 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
9 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
10 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
11 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
12 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
13 Sobic.004G219100 phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed K03859: PIGC, phosphatidylinositol N-acetylglucosaminyltransferase subunit C
14 Sobic.002G320500 MYB family transcription factor, putative, expressed -
15 Sobic.007G203200 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
16 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2
17 Sobic.010G028800 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
18 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
19 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
20 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3


Gene co-expression network
sample Sobic001G407200 Sobic001G407200 Sobic009G210500 Sobic009G210500 Sobic001G407200--Sobic009G210500 Sobic008G162900 Sobic008G162900 Sobic001G407200--Sobic008G162900 Sobic005G013200 Sobic005G013200 Sobic001G407200--Sobic005G013200 Sobic002G144933 Sobic002G144933 Sobic001G407200--Sobic002G144933 Sobic010G129200 Sobic010G129200 Sobic001G407200--Sobic010G129200 Sobic010G277500 Sobic010G277500 Sobic001G407200--Sobic010G277500 Sobic009G126400 Sobic009G126400 Sobic001G407200--Sobic009G126400 Sobic004G084300 Sobic004G084300 Sobic001G407200--Sobic004G084300 Sobic008G047800 Sobic008G047800 Sobic001G407200--Sobic008G047800 Sobic002G320500 Sobic002G320500 Sobic009G210500--Sobic002G320500 Sobic007G065400 Sobic007G065400 Sobic009G210500--Sobic007G065400 Sobic002G157000 Sobic002G157000 Sobic009G210500--Sobic002G157000 Sobic006G032400 Sobic006G032400 Sobic009G210500--Sobic006G032400 Sobic003G268300 Sobic003G268300 Sobic009G210500--Sobic003G268300 Sobic009G210500--Sobic001G407200 Sobic007G167500 Sobic007G167500 Sobic009G210500--Sobic007G167500 Sobic001G090400 Sobic001G090400 Sobic009G210500--Sobic001G090400 Sobic004G145500 Sobic004G145500 Sobic009G210500--Sobic004G145500 Sobic003G184699 Sobic003G184699 Sobic008G162900--Sobic003G184699 Sobic008G162900--Sobic009G126400 Sobic008G162900--Sobic008G047800 Sobic008G162900--Sobic001G407200 Sobic008G162900--Sobic005G013200 Sobic003G052200 Sobic003G052200 Sobic008G162900--Sobic003G052200 Sobic006G216800 Sobic006G216800 Sobic008G162900--Sobic006G216800 Sobic001G222500 Sobic001G222500 Sobic008G162900--Sobic001G222500 Sobic002G343901 Sobic002G343901 Sobic008G162900--Sobic002G343901 Sobic002G103600 Sobic002G103600 Sobic005G013200--Sobic002G103600 Sobic005G013200--Sobic010G129200 Sobic005G013200--Sobic008G162900 Sobic005G013200--Sobic001G407200 Sobic005G013200--Sobic001G222500 Sobic002G408200 Sobic002G408200 Sobic005G013200--Sobic002G408200 Sobic008G028700 Sobic008G028700 Sobic005G013200--Sobic008G028700 Sobic001G251700 Sobic001G251700 Sobic005G013200--Sobic001G251700 Sobic005G013200--Sobic004G084300 Sobic008G173900 Sobic008G173900 Sobic002G144933--Sobic008G173900 Sobic002G144933--Sobic002G157000 Sobic001G420200 Sobic001G420200 Sobic002G144933--Sobic001G420200 Sobic002G144933--Sobic003G268300 Sobic001G274200 Sobic001G274200 Sobic002G144933--Sobic001G274200 Sobic007G037900 Sobic007G037900 Sobic002G144933--Sobic007G037900 Sobic002G144933--Sobic004G145500 Sobic003G170100 Sobic003G170100 Sobic002G144933--Sobic003G170100 Sobic009G065100 Sobic009G065100 Sobic002G144933--Sobic009G065100 Sobic005G045300 Sobic005G045300 Sobic010G129200--Sobic005G045300 Sobic010G129200--Sobic005G013200 Sobic010G129200--Sobic009G126400 Sobic008G024600 Sobic008G024600 Sobic010G129200--Sobic008G024600 Sobic006G209850 Sobic006G209850 Sobic010G129200--Sobic006G209850 Sobic010G129200--Sobic001G407200 Sobic002G053000 Sobic002G053000 Sobic010G129200--Sobic002G053000 Sobic010G129200--Sobic010G277500 Sobic010G136600 Sobic010G136600 Sobic010G129200--Sobic010G136600 Sobic004G208900 Sobic004G208900 Sobic010G277500--Sobic004G208900 Sobic010G277500--Sobic006G209850 Sobic010G277500--Sobic007G065400 Sobic009G260500 Sobic009G260500 Sobic010G277500--Sobic009G260500 Sobic003G280800 Sobic003G280800 Sobic010G277500--Sobic003G280800 Sobic004G009600 Sobic004G009600 Sobic010G277500--Sobic004G009600 Sobic010G277500--Sobic008G028700 Sobic004G258700 Sobic004G258700 Sobic010G277500--Sobic004G258700 Sobic010G277500--Sobic006G216800 Sobic009G126400--Sobic003G052200 Sobic009G040600 Sobic009G040600 Sobic009G126400--Sobic009G040600 Sobic009G126400--Sobic008G047800 Sobic009G126400--Sobic003G280800 Sobic009G126400--Sobic001G222500 Sobic009G126400--Sobic008G162900 Sobic007G096000 Sobic007G096000 Sobic009G126400--Sobic007G096000 Sobic009G126400--Sobic004G208900 Sobic002G309600 Sobic002G309600 Sobic009G126400--Sobic002G309600 Sobic004G084300--Sobic008G047800 Sobic004G084300--Sobic001G222500 Sobic003G241200 Sobic003G241200 Sobic004G084300--Sobic003G241200 Sobic002G006900 Sobic002G006900 Sobic004G084300--Sobic002G006900 Sobic010G236400 Sobic010G236400 Sobic004G084300--Sobic010G236400 Sobic004G084300--Sobic009G040600 Sobic008G067600 Sobic008G067600 Sobic004G084300--Sobic008G067600 Sobic004G084300--Sobic009G065100 Sobic007G132400 Sobic007G132400 Sobic004G084300--Sobic007G132400 Sobic008G047800--Sobic002G006900 Sobic008G047800--Sobic004G084300 Sobic001G512700 Sobic001G512700 Sobic008G047800--Sobic001G512700 Sobic001G155000 Sobic001G155000 Sobic008G047800--Sobic001G155000 Sobic008G047800--Sobic009G040600 Sobic007G011300 Sobic007G011300 Sobic008G047800--Sobic007G011300 Sobic007G217000 Sobic007G217000 Sobic008G047800--Sobic007G217000 Sobic004G274200 Sobic004G274200 Sobic008G047800--Sobic004G274200 Sobic008G047800--Sobic002G309600
Octagon: transcription factors


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