Gene annotation
Transcriptome id Sobic.010G277500.2,Sobic.010G277500.1
Synonym Sb10g031110
Functional annotation expressed protein
UniProt C5Z2L7
Pfam PF05623
Panther DB PTHR32010 PTHR32010:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16100 : Protein of unknown function (DUF789)
RAP-DB (Rice) LOC_Os06g51330.1 : expressed protein
MaizeGDB (Corn) Zm00025a041682
Brachypodium -
Barley -
Wheat TraesCS7B02G484300 , TraesCS7B02G484300 , TraesCS7B02G484300 , TraesCS7B02G484300 , TraesCS7B02G484300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G208900 RNA-binding protein Luc7-like, putative, expressed -
2 Sobic.006G209850 - -
3 Sobic.007G065400 expressed protein K14400: pre-mRNA cleavage complex 2 protein Pcf11
4 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
5 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
6 Sobic.004G009600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
7 Sobic.008G028700 SET domain containing protein, expressed -
8 Sobic.004G258700 PHD-finger family protein, expressed -
9 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
10 Sobic.009G040600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
11 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
12 Sobic.002G031400 OsFBL39 - F-box domain and LRR containing protein, expressed -
13 Sobic.007G117400 expressed protein -
14 Sobic.004G145500 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
15 Sobic.003G372700 expressed protein -
16 Sobic.001G407200 SacI homology domain containing protein, expressed -
17 Sobic.009G210500 expressed protein -
18 Sobic.010G136600 - -
19 Sobic.010G129200 - -
20 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1


Gene co-expression network
sample Sobic010G277500 Sobic010G277500 Sobic004G208900 Sobic004G208900 Sobic010G277500--Sobic004G208900 Sobic006G209850 Sobic006G209850 Sobic010G277500--Sobic006G209850 Sobic007G065400 Sobic007G065400 Sobic010G277500--Sobic007G065400 Sobic009G260500 Sobic009G260500 Sobic010G277500--Sobic009G260500 Sobic003G280800 Sobic003G280800 Sobic010G277500--Sobic003G280800 Sobic004G009600 Sobic004G009600 Sobic010G277500--Sobic004G009600 Sobic008G028700 Sobic008G028700 Sobic010G277500--Sobic008G028700 Sobic004G258700 Sobic004G258700 Sobic010G277500--Sobic004G258700 Sobic006G216800 Sobic006G216800 Sobic010G277500--Sobic006G216800 Sobic009G040600 Sobic009G040600 Sobic004G208900--Sobic009G040600 Sobic004G208900--Sobic010G277500 Sobic003G052200 Sobic003G052200 Sobic004G208900--Sobic003G052200 Sobic010G139000 Sobic010G139000 Sobic004G208900--Sobic010G139000 Sobic008G113100 Sobic008G113100 Sobic004G208900--Sobic008G113100 Sobic002G006900 Sobic002G006900 Sobic004G208900--Sobic002G006900 Sobic004G208900--Sobic008G028700 Sobic004G208900--Sobic003G280800 Sobic009G126400 Sobic009G126400 Sobic004G208900--Sobic009G126400 Sobic006G128900 Sobic006G128900 Sobic006G209850--Sobic006G128900 Sobic001G511500 Sobic001G511500 Sobic006G209850--Sobic001G511500 Sobic006G209850--Sobic003G280800 Sobic006G209850--Sobic010G277500 Sobic008G024600 Sobic008G024600 Sobic006G209850--Sobic008G024600 Sobic002G053000 Sobic002G053000 Sobic006G209850--Sobic002G053000 Sobic010G129200 Sobic010G129200 Sobic006G209850--Sobic010G129200 Sobic004G145500 Sobic004G145500 Sobic006G209850--Sobic004G145500 Sobic002G243900 Sobic002G243900 Sobic006G209850--Sobic002G243900 Sobic007G065400--Sobic002G006900 Sobic002G191800 Sobic002G191800 Sobic007G065400--Sobic002G191800 Sobic008G009700 Sobic008G009700 Sobic007G065400--Sobic008G009700 Sobic007G065400--Sobic009G040600 Sobic007G065400--Sobic004G145500 Sobic009G210500 Sobic009G210500 Sobic007G065400--Sobic009G210500 Sobic003G119000 Sobic003G119000 Sobic007G065400--Sobic003G119000 Sobic003G372700 Sobic003G372700 Sobic007G065400--Sobic003G372700 Sobic007G065400--Sobic008G028700 Sobic001G219600 Sobic001G219600 Sobic009G260500--Sobic001G219600 Sobic009G260500--Sobic004G009600 Sobic009G260500--Sobic010G277500 Sobic009G260500--Sobic008G009700 Sobic009G260500--Sobic010G139000 Sobic009G260500--Sobic008G028700 Sobic009G260500--Sobic009G040600 Sobic002G309600 Sobic002G309600 Sobic009G260500--Sobic002G309600 Sobic001G311500 Sobic001G311500 Sobic009G260500--Sobic001G311500 Sobic003G280800--Sobic002G309600 Sobic001G071400 Sobic001G071400 Sobic003G280800--Sobic001G071400 Sobic002G134200 Sobic002G134200 Sobic003G280800--Sobic002G134200 Sobic003G280800--Sobic006G209850 Sobic003G280800--Sobic003G119000 Sobic001G474600 Sobic001G474600 Sobic003G280800--Sobic001G474600 Sobic007G117400 Sobic007G117400 Sobic003G280800--Sobic007G117400 Sobic003G280800--Sobic006G216800 Sobic003G280800--Sobic003G372700 Sobic004G009600--Sobic009G040600 Sobic004G009600--Sobic008G028700 Sobic004G009600--Sobic009G260500 Sobic010G279450 Sobic010G279450 Sobic004G009600--Sobic010G279450 Sobic004G009600--Sobic002G309600 Sobic004G009600--Sobic007G117400 Sobic003G293200 Sobic003G293200 Sobic004G009600--Sobic003G293200 Sobic001G363500 Sobic001G363500 Sobic004G009600--Sobic001G363500 Sobic004G009600--Sobic010G277500 Sobic008G028700--Sobic010G279450 Sobic008G028700--Sobic009G040600 Sobic008G028700--Sobic004G009600 Sobic008G028700--Sobic004G258700 Sobic008G028700--Sobic007G065400 Sobic008G028700--Sobic010G139000 Sobic008G028700--Sobic002G006900 Sobic002G145101 Sobic002G145101 Sobic008G028700--Sobic002G145101 Sobic008G028700--Sobic008G113100 Sobic004G258700--Sobic008G113100 Sobic004G258700--Sobic008G028700 Sobic001G456900 Sobic001G456900 Sobic004G258700--Sobic001G456900 Sobic003G148000 Sobic003G148000 Sobic004G258700--Sobic003G148000 Sobic003G101500 Sobic003G101500 Sobic004G258700--Sobic003G101500 Sobic004G258700--Sobic010G277500 Sobic004G258700--Sobic007G065400 Sobic007G161000 Sobic007G161000 Sobic004G258700--Sobic007G161000 Sobic004G258700--Sobic009G040600 Sobic002G133400 Sobic002G133400 Sobic006G216800--Sobic002G133400 Sobic007G116200 Sobic007G116200 Sobic006G216800--Sobic007G116200 Sobic006G216800--Sobic002G309600 Sobic006G216800--Sobic002G134200 Sobic003G332800 Sobic003G332800 Sobic006G216800--Sobic003G332800 Sobic005G112300 Sobic005G112300 Sobic006G216800--Sobic005G112300 Sobic006G216800--Sobic003G280800 Sobic006G216800--Sobic010G139000 Sobic006G216800--Sobic010G277500
Octagon: transcription factors


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