Gene annotation
Transcriptome id Sobic.010G136600.3
Synonym
Functional annotation -
UniProt A0A1W0VSU7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G096600 - -
2 Sobic.004G145500 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
3 Sobic.002G144933 - -
4 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
5 Sobic.008G028700 SET domain containing protein, expressed -
6 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein
7 Sobic.010G277500 expressed protein -
8 Sobic.009G210500 expressed protein -
9 Sobic.004G009600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
10 Sobic.009G086900 expressed protein -
11 Sobic.010G129200 - -
12 Sobic.003G170100 - -
13 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
14 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
15 Sobic.001G241200 protein kinase domain containing protein, expressed -
16 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
17 Sobic.009G040600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
18 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
19 Sobic.003G084900 expressed protein -
20 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR


Gene co-expression network
sample Sobic010G136600 Sobic010G136600 Sobic007G096600 Sobic007G096600 Sobic010G136600--Sobic007G096600 Sobic004G145500 Sobic004G145500 Sobic010G136600--Sobic004G145500 Sobic002G144933 Sobic002G144933 Sobic010G136600--Sobic002G144933 Sobic008G173900 Sobic008G173900 Sobic010G136600--Sobic008G173900 Sobic008G028700 Sobic008G028700 Sobic010G136600--Sobic008G028700 Sobic009G126400 Sobic009G126400 Sobic010G136600--Sobic009G126400 Sobic010G277500 Sobic010G277500 Sobic010G136600--Sobic010G277500 Sobic009G210500 Sobic009G210500 Sobic010G136600--Sobic009G210500 Sobic004G009600 Sobic004G009600 Sobic010G136600--Sobic004G009600 Sobic002G243900 Sobic002G243900 Sobic007G096600--Sobic002G243900 Sobic003G268300 Sobic003G268300 Sobic007G096600--Sobic003G268300 Sobic003G176500 Sobic003G176500 Sobic007G096600--Sobic003G176500 Sobic001G274200 Sobic001G274200 Sobic007G096600--Sobic001G274200 Sobic003G200200 Sobic003G200200 Sobic007G096600--Sobic003G200200 Sobic005G144400 Sobic005G144400 Sobic007G096600--Sobic005G144400 Sobic003G148000 Sobic003G148000 Sobic007G096600--Sobic003G148000 Sobic003G332800 Sobic003G332800 Sobic007G096600--Sobic003G332800 Sobic001G420200 Sobic001G420200 Sobic007G096600--Sobic001G420200 Sobic007G065400 Sobic007G065400 Sobic004G145500--Sobic007G065400 Sobic004G145500--Sobic008G173900 Sobic004G145500--Sobic002G144933 Sobic008G009700 Sobic008G009700 Sobic004G145500--Sobic008G009700 Sobic001G306900 Sobic001G306900 Sobic004G145500--Sobic001G306900 Sobic004G145500--Sobic003G200200 Sobic004G145500--Sobic009G210500 Sobic004G145500--Sobic010G136600 Sobic001G241200 Sobic001G241200 Sobic004G145500--Sobic001G241200 Sobic002G144933--Sobic008G173900 Sobic002G157000 Sobic002G157000 Sobic002G144933--Sobic002G157000 Sobic002G144933--Sobic001G420200 Sobic002G144933--Sobic003G268300 Sobic002G144933--Sobic001G274200 Sobic007G037900 Sobic007G037900 Sobic002G144933--Sobic007G037900 Sobic002G144933--Sobic004G145500 Sobic003G170100 Sobic003G170100 Sobic002G144933--Sobic003G170100 Sobic009G065100 Sobic009G065100 Sobic002G144933--Sobic009G065100 Sobic008G173900--Sobic002G157000 Sobic008G173900--Sobic002G144933 Sobic008G173900--Sobic001G420200 Sobic008G173900--Sobic003G268300 Sobic008G054500 Sobic008G054500 Sobic008G173900--Sobic008G054500 Sobic008G173900--Sobic003G200200 Sobic008G173900--Sobic001G274200 Sobic001G413500 Sobic001G413500 Sobic008G173900--Sobic001G413500 Sobic008G173900--Sobic007G096600 Sobic010G279450 Sobic010G279450 Sobic008G028700--Sobic010G279450 Sobic009G040600 Sobic009G040600 Sobic008G028700--Sobic009G040600 Sobic008G028700--Sobic004G009600 Sobic004G258700 Sobic004G258700 Sobic008G028700--Sobic004G258700 Sobic008G028700--Sobic007G065400 Sobic010G139000 Sobic010G139000 Sobic008G028700--Sobic010G139000 Sobic002G006900 Sobic002G006900 Sobic008G028700--Sobic002G006900 Sobic002G145101 Sobic002G145101 Sobic008G028700--Sobic002G145101 Sobic008G113100 Sobic008G113100 Sobic008G028700--Sobic008G113100 Sobic003G052200 Sobic003G052200 Sobic009G126400--Sobic003G052200 Sobic009G126400--Sobic009G040600 Sobic008G047800 Sobic008G047800 Sobic009G126400--Sobic008G047800 Sobic003G280800 Sobic003G280800 Sobic009G126400--Sobic003G280800 Sobic001G222500 Sobic001G222500 Sobic009G126400--Sobic001G222500 Sobic008G162900 Sobic008G162900 Sobic009G126400--Sobic008G162900 Sobic007G096000 Sobic007G096000 Sobic009G126400--Sobic007G096000 Sobic004G208900 Sobic004G208900 Sobic009G126400--Sobic004G208900 Sobic002G309600 Sobic002G309600 Sobic009G126400--Sobic002G309600 Sobic010G277500--Sobic004G208900 Sobic006G209850 Sobic006G209850 Sobic010G277500--Sobic006G209850 Sobic010G277500--Sobic007G065400 Sobic009G260500 Sobic009G260500 Sobic010G277500--Sobic009G260500 Sobic010G277500--Sobic003G280800 Sobic010G277500--Sobic004G009600 Sobic010G277500--Sobic008G028700 Sobic010G277500--Sobic004G258700 Sobic006G216800 Sobic006G216800 Sobic010G277500--Sobic006G216800 Sobic002G320500 Sobic002G320500 Sobic009G210500--Sobic002G320500 Sobic009G210500--Sobic007G065400 Sobic009G210500--Sobic002G157000 Sobic006G032400 Sobic006G032400 Sobic009G210500--Sobic006G032400 Sobic009G210500--Sobic003G268300 Sobic001G407200 Sobic001G407200 Sobic009G210500--Sobic001G407200 Sobic007G167500 Sobic007G167500 Sobic009G210500--Sobic007G167500 Sobic001G090400 Sobic001G090400 Sobic009G210500--Sobic001G090400 Sobic009G210500--Sobic004G145500 Sobic004G009600--Sobic009G040600 Sobic004G009600--Sobic008G028700 Sobic004G009600--Sobic009G260500 Sobic004G009600--Sobic010G279450 Sobic004G009600--Sobic002G309600 Sobic007G117400 Sobic007G117400 Sobic004G009600--Sobic007G117400 Sobic003G293200 Sobic003G293200 Sobic004G009600--Sobic003G293200 Sobic001G363500 Sobic001G363500 Sobic004G009600--Sobic001G363500 Sobic004G009600--Sobic010G277500
Octagon: transcription factors


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